Rhodococcus ruber: CS378_21890
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Entry
CS378_21890 CDS
T05142
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rrz
Rhodococcus ruber
Pathway
rrz03420
Nucleotide excision repair
rrz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rrz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CS378_21890 (pcrA)
03430 Mismatch repair
CS378_21890 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rrz03400
]
CS378_21890 (pcrA)
Enzymes [BR:
rrz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CS378_21890 (pcrA)
DNA repair and recombination proteins [BR:
rrz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CS378_21890 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
CS378_21890 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
DEAD
AAA_22
ResIII
Motif
Other DBs
NCBI-ProteinID:
ATQ31127
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All DBs
Position
4785770..4788157
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AA seq
795 aa
AA seq
DB search
MRATTSDALLEGLNPQQREAVTHTGSPLLIVAGAGSGKTAVLTRRIAYLLGERRVTPGQI
LAITFTNKAAAEMRERVAHLVGPRANSMWVSTFHSSCVRILRAQSALLSGMNSNFTIYDA
DDSRRLLTMIAKDLDLDVKRYSARLLATHISNLKNELIGPEEAAAAADREAADLPRIVAT
VYAHYQQRLRAANAFDFDDLIGETVALLQAHPPVAEYYRRRFRHVLVDEYQDTNHAQYVL
VRTLVGGADDTVSDDAVAPAELCVVGDADQSIYAFRGATIRNIEEFERDYPEARTILLEQ
NYRSTQTILSAANAVIARNTGRREKRLWTDSGAGEPITGYVADNEHDEAQFVAAEIDRLV
DAGDAKFADIAVFYRTNNSSRALEDVFIRHGVPYRVVGGVRFYERKEVRDLVAYLRVLAN
PDDTVSLRRILNTPRRGIGDRAEACVAVHAERTGVGFGRALRDAAEGTVPLLNSRSQKAV
AAFVDLMDELRAMLTETDADGNDLVDIGDIVEAVLDRTGYRAELEASDDPQDGTRLDNLN
ELVSVAREFSSDARNAAGLEDEREVPEGEPEPGSLAAFLERVSLVADADQIPEEGDGVVT
LMTLHTAKGLEFPVVFVTGWEDGQFPHMRALGDPAELSEERRLAYVGLTRARHRLYLSRA
VLRSAWGQPVTNPESRFLQEIPQELVEWRREDPGVAGGHAIGAGRGRSGYGGIGSGFGGG
TSRFGGDRPSMPSSGRSRNNHLVLAVGDRVSHDKYGLGTVLETRGSGPTATVVVDFGSAG
KVRLMLVGGVPMVKL
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
gtgcgagcgacgacctccgacgctctgctcgagggcctcaacccacagcagcgggaggcg
gtgacccacacgggttctccgctgctcatcgtcgcgggcgccggctcggggaagacggcg
gtgctgacgcggcgcatcgcgtacctgctgggggagcggagggtgacgccgggccagatc
ctggccatcacgttcaccaacaaggcggccgccgagatgcgcgagcgcgtcgcccacctg
gtcggcccgcgggcgaacagcatgtgggtgtcgacgttccactcgagctgcgtgcggatc
ctgcgcgcgcagtcggcgctgctgtcggggatgaactcgaacttcaccatctacgacgcc
gacgactcccggcggctgctcaccatgatcgccaaggatctcgacctcgacgtcaagcgg
tactccgcgcggctgctggctacgcacatctccaatctcaagaacgagctgatcggtccc
gaggaggccgcggccgccgcggatcgcgaggcggcggacctgccgcggatcgtcgcgacg
gtctacgcccactaccagcagcggctgcgtgcggccaacgccttcgacttcgacgacctg
atcggggagacggtggcgctgttgcaggcgcatccgccggtggcggagtactaccgccga
cggttccgccacgttctcgtcgacgagtaccaggacaccaaccacgcgcagtacgtgctc
gtgcgcacgctcgtcggcggggcggacgacaccgtgtcggacgacgcggtcgcgccggcg
gaactgtgtgtcgtcggcgacgccgaccagtccatctacgcgttccgcggcgcgacgatc
cgcaacatcgaggagttcgaacgcgactatcccgaggctcgcacgatcctgctcgagcag
aactaccgttccacccagaccatcctctccgcggcgaacgcggtgatcgcccgcaacacc
gggcgtcgggagaaacggctgtggactgactccggtgcgggggagccgatcaccgggtac
gtcgccgacaacgagcacgacgaggcgcagttcgtcgccgcggagatcgaccggctcgtc
gacgccggggacgcgaaattcgccgacatcgccgtcttctaccgcaccaacaactcctcg
cgcgccctcgaggacgtgttcatccggcacggcgtgccctaccgggtggtcggcggcgtg
cgcttctacgagcgcaaggaggtgcgggacctcgtcgcgtacctgcgggtactggccaac
ccggacgacacggtcagcctgcgccggatcctcaacaccccccgtcgcggcatcggcgac
cgcgccgaggcctgcgtggcggtgcacgccgaacgcacgggcgtcgggttcggccgggcc
ctgcgcgatgccgccgagggaaccgtgccgctgctgaattcccgctcgcagaaggccgtc
gccgcgttcgtcgacctcatggacgaactacgggcgatgctcaccgagaccgacgccgac
ggcaacgacctcgtcgacatcggcgacatcgtcgaagcggtgctcgatcgcaccgggtat
cgcgccgagctcgaggccagcgacgacccgcaggacggcacgaggctcgacaacctcaac
gagttggtcagcgtcgcaagagaattcagttcggacgcgcgtaacgccgcaggtctcgag
gacgaacgcgaggtgccggagggggagcccgagcccggttccctggcggcgttcctcgag
cgggtgtcgctggtggccgacgccgatcagatccccgaggagggcgacggggtcgtcacc
ctgatgacgctgcacaccgccaaggggctcgaattcccggtggtgttcgtcaccgggtgg
gaggacgggcagttcccgcacatgcgcgctctcggcgaccctgccgaactctcggaggaa
cggcgcctggcctatgtcggcctcacccgtgcgcggcaccgcctgtatctgagccgcgcg
gtgctgcgctcggcctgggggcagcccgtgaccaatccggaatcgcgtttcctccaggag
atcccgcaggaactcgtggaatggcgccgggaggatccgggggtcgccggtgggcacgcc
atcggtgccgggcggggccggagcggttacggcggaatcggttccggcttcgggggcggg
acttcccggttcggcggcgaccggccgtcgatgccgagttccgggcgttcgcgcaacaac
catctcgtgctcgccgtcggcgatcgggtcagccacgacaagtacggcctcggcacggtc
ctcgaaacccgcggctccgggccgaccgcgacggtggtcgtcgacttcggcagcgccggg
aaggtgcggttgatgctcgtcggcggcgtgccgatggtcaaactctga
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