Rhodococcus ruber: CS378_22205
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Entry
CS378_22205 CDS
T05142
Name
(GenBank) hypothetical protein
Organism
rrz
Rhodococcus ruber
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
nSTAND1
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_EIPR1
Ge1_WD40
Beta-prop_TEP1_C
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_Vps41
PD40
Beta-prop_WDR19_1st
AAA_16
Beta-prop_SPT8
Beta-prop_SCAP
DUF7165
WD_LRWD1
Beta-prop_DCAF12
Cytochrom_D1
Beta-prop_IP5PC_F
RsgA_GTPase
AAA_29
AAA_22
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ATQ32077
LinkDB
All DBs
Position
4846760..4850743
Genome browser
AA seq
1327 aa
AA seq
DB search
MEPVDERTAAEPRQLFADQLRTLFAAAGRPALKKVASEASAVARSVGSERTVSVQRISDW
RSGARVPATFETIRPVLVVLIRSARALHAQPPTPGLYSIKQWERWWEHARGPAGRARTEP
TEPPAAALPPGVRPYRGLEAYRDRDAQLFFGRARSVRELAETVVAAHGHGIVVVTGASGV
GKSSLVQAGLVPELCRDDRWRPVVLTPGRHPVAQLVECVPELADISDADEPTAVARLHAA
AAREGSAGLLIVVDQIEELFTHCEDAAERSAFLALLDQAATVGDGDTPVSVVATLRSDFY
ERAVTYPVLARALERHSKTVQPLTRDDLVEVITAPARLLGLRFEPGLVELILHDLGVLTD
DDVGGAELPLLSHLLDALWERRRGGHLTVAGYRATGGVRGSIAASAERAWEELDDRGRRL
ARAMLVHLVYVTGTGTDVKIRRPLDRLLAAAGDDAEAGRRVVDHFVTARVLVVDDGSVEL
VHDTVIDAWPRLKSWIRADRSYAALRQQIEADAAGWVAGRRHADLLYQRGRMDLVAEHED
RELVGRAPAGGVETALSPTAVAFLRESRRQIRRRTRVRNGAIAALVLSTVVAVVMGTLAW
AGKSRAEAERSAAQFQQVVALADSMQERDPSTAAQLALAAWRLRPDSEVAYSRLVATEQM
PLALPVEGHSGPVYGLAIAPDGTTLASASDDGSVRLWDLSDRGAPRPLGALVSDEPEYLA
SVAFSPDGTLLAAGGATGAVWIWDVTDRDRPVALLTGEVFVPEVVHNVRFGPDGRSLAVP
YDNGSVVLVDTSEPRTRGFPRTVLPAHGAAVRTVAFHPGGTVLATSSDDRSVRLWDVTDP
AAAVPVGAALTGFRDVAHSVAFAPDGRTLAVSSDDGVVTMFDTTDPAAVRPTGPPVQAHT
GGVWTVAFAPDGRTLASASWDGTAKLWAVDPKTRMIDEMRPALAGNGGGVPALAFTPDGA
ALVTGGHDGNIRIWTLPRGRVAVADSALTLPAIDRSGSFVATGGYNSSVPLWRIGSDGHW
APLGVVDRPRPVGGAVTTALSPSAATLVTASTTDGEIHLWDVRDPTAPRLWVDPIVTETR
FTSELDFGPGGTTLVTGHDDHSLVLWDVSDPARPVRRGAPLRGPTNLVRAAAFTPDGRHL
VVTSADGSLYAWDVTDPSAPVALPVSDGHTAGVNALAFSADGNVLATGGDDHTVRVWDRG
PDGSFTVRPDALRGHTGTVYSVSVTPNGSEVVSGSDDGTVRLWHVADSEHMHPVGGPITE
IGVGRWQVGFLPGRNAVIAAGGDGTVRTWSLDVESIVARICASTTGRITETLPQSDLPVA
GRTVCEG
NT seq
3984 nt
NT seq
+upstream
nt +downstream
nt
atggaaccggtcgacgagcgaaccgcggcggagccccggcagctgttcgccgaccagctc
cggacgctgttcgcggcggcgggacgtcccgcgctcaagaaggtcgcctccgaggcgtcg
gccgtcgcccgctccgtgggcagcgagcgcaccgtgtccgtgcagcggatcagcgactgg
cgatccggtgcccgggtacccgccacgttcgagacgatccgtccggtcctggtggtgctg
atccgctccgcccgggccctgcacgcgcagccgccgacgcccggcctctactcgatcaag
cagtgggagcggtggtgggaacacgcccggggaccggccgggcgggcccggacggagccc
accgagccgcccgccgcggcactgccccccggcgtgcggccctaccgcggtctcgaggcg
taccgcgatcgggacgcgcagctgttcttcggccgggcccggagcgtgcgcgaactcgcc
gagaccgtcgtcgccgcccacggtcacggcatcgtggtggtgaccggtgcctccggcgtc
ggcaagtcctccctcgtgcaggccggcctggtcccggaactgtgccgtgacgaccgttgg
cggccggtggtcctgaccccgggacggcacccggtggcgcagctcgtcgagtgcgtaccc
gaactcgccgacatctcggatgcggacgagccgaccgcggtggcgcggctgcacgccgcc
gccgcccgagagggcagcgcgggcctgctgatcgtcgtcgaccagatcgaggagctgttc
acccactgcgaggacgcggccgaacgctcggcgttcctcgcgctgctcgatcaggccgcg
accgtcggcgacggcgacacaccggtctcggtggtggccacgctgagatcggacttctac
gagcgggccgtgacctatcccgtgctggcccgggcgctggagcggcacagcaagacggtc
cagcccctgacccgggacgacctggtcgaggtgatcaccgcgccggcgcggttgctcggt
ctgcggttcgagccgggcctggtcgaactgatcctgcacgacctcggagtgctgaccgac
gacgacgtcggcggggccgaactgcccctgctgtcacacctgctcgacgccctgtgggaa
cgccggcgcggcggtcacctgaccgtggccgggtaccgcgctaccggcggggtacgcgga
tcgatcgcggcgagcgcggaacgtgcgtgggaagagctcgacgaccgcggccgccgactc
gcgcgcgcgatgctcgtccacctggtctacgtgaccggcaccggcaccgacgtgaagatc
cggcgcccgctggatcggctgctcgccgccgccggcgacgacgccgaggcgggacgccgg
gtggtcgaccacttcgtcaccgcccgcgtcctcgtcgtcgacgacggcagcgtcgagctg
gttcacgacacggtcatcgacgcctggccgcgcctgaagtcgtggatccgggccgaccgc
tcgtacgctgcgctgcgccagcagatcgaggcggacgcggcaggctgggtcgcgggccgc
cggcacgcggacctgctgtaccaacggggccggatggacctcgtcgccgagcacgaggat
cgggagctcgtggggcgggccccggccggcggtgtcgagaccgcgctcagcccgacagcg
gtggcctttctccgggagtcgcgacggcagatccgtcgccggacccgcgtccgcaacggt
gccatcgccgccctcgtgctctccaccgtcgtcgcggtggtgatggggacgctggcctgg
gccggcaagagccgcgccgaggccgagcgcagtgccgcccagttccagcaggtcgtcgcg
ctcgccgactccatgcaggagcgggacccgtccaccgcggcccagctggcgctcgcggcg
tggcgcctgcgtccggacagcgaggtcgcgtattcgcggctcgtcgcgaccgagcagatg
ccgctggcactgcccgtggagggtcacagcggtccggtctacgggctggcgatcgccccg
gacggcacgaccctggcctcggcgagcgacgacggcagtgtccgcctgtgggatctgtcc
gaccggggcgcgccgcggccgctcggagcgctggtgtccgacgagcccgagtatctggcc
tcggtcgccttcagcccggacggcaccctgctcgcggcgggtggtgcaacaggtgcggtg
tggatctgggacgtcaccgaccgggaccggcccgtcgcgctgctgaccggcgaggtgttc
gtgccggaggtcgtccacaatgtgcggttcggcccggacggccggtcgctcgcggtgccg
tacgacaacggatcggtcgtgctcgtcgacacgagcgagccccggacgcggggatttccc
cgcaccgtcctgcccgcgcacggcgcggcggtgcgcaccgtggcgttccaccccggcggt
accgtgctggccacgtcgagcgacgatcggtcggtgcggctgtgggatgtgaccgacccg
gccgccgccgtgcccgtcggcgctgcgctgaccggtttccgcgacgtggcgcactccgtc
gcgttcgcccccgacggccggaccctcgcggtcagcagcgacgacggtgtcgtcacgatg
ttcgacaccacggacccggcggcggtgcgcccgaccggccctcccgtgcaggcgcacacc
ggcggggtgtggaccgtcgcgttcgcacccgacggccgcaccctggcgagcgcgtcgtgg
gacgggaccgcgaagctgtgggcggtcgacccgaagacgcggatgatcgacgagatgcgg
ccggctctcgcaggcaacggcggcggcgtccccgcgctcgcgttcacccccgacggcgcc
gcgttggtcaccggcgggcacgacggcaacatccggatctggacgctgccgcgcggacgc
gtcgcggtcgcggactctgcgctgacgctgcccgcgatcgatcgctccggctcgttcgtc
gccaccggcgggtacaactcctccgtgccgctgtggcggatcggctccgacgggcactgg
gcgccgctcggcgtcgtggatcgtcccagaccggtgggcggcgcggtgaccaccgccctg
tcgccctccgccgcgactctggtcaccgcctcgacgaccgacggcgagatccacctgtgg
gatgtccgcgaccccacggccccgcggctgtgggtggacccgatcgtgaccgagacccgg
ttcacgtccgaactcgacttcggccccgggggcaccaccctcgtcaccggccacgacgac
cactctctcgtgctgtgggacgtgtcggatccggcgcgtccggtgcgccggggagcaccg
ctgcggggcccgacgaatctcgtgcgggcggccgcgttcacgccggacggccggcatctg
gtcgtgaccagcgcggacggctcgctctatgcgtgggacgtcaccgatccgtccgccccc
gtcgcgctgccggtgtcggacggtcacaccgccggcgtcaacgccctcgcgttcagcgcc
gacggcaacgtcctcgccaccggcggcgacgaccacacggtccgcgtgtgggaccgcgga
cccgacggatcgttcaccgtccggcccgacgcgctgcgcggccacaccggcaccgtctac
tcggtgtccgtcaccccgaacggcagcgaggtggtcagcggcagtgacgacggcacggta
cgactgtggcacgtcgccgactcggagcacatgcacccggtgggcggcccgatcaccgag
atcggtgtcggacggtggcaggtcggcttcctgccgggccgcaacgccgtgatcgcggcg
ggcggcgacgggacggtgcgcacctggagcctggacgtcgagtcgatcgtcgcgcggatc
tgcgcctcgacgacgggccggatcaccgagacgctgccacagtccgatctgccggtggcc
ggccggacggtgtgcgagggctga
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