Rhodococcus ruber: CS378_22810
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Entry
CS378_22810 CDS
T05142
Name
(GenBank) AMP-dependent synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rrz
Rhodococcus ruber
Pathway
rrz00061
Fatty acid biosynthesis
rrz00071
Fatty acid degradation
rrz01100
Metabolic pathways
rrz01212
Fatty acid metabolism
rrz02024
Quorum sensing
rrz04146
Peroxisome
Module
rrz_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rrz00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
CS378_22810
00071 Fatty acid degradation
CS378_22810
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CS378_22810
09145 Cellular community - prokaryotes
02024 Quorum sensing
CS378_22810
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rrz01004
]
CS378_22810
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rrz04147
]
CS378_22810
Enzymes [BR:
rrz01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
CS378_22810
Lipid biosynthesis proteins [BR:
rrz01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
CS378_22810
Exosome [BR:
rrz04147
]
Exosomal proteins
Exosomal proteins of breast milk
CS378_22810
Exosomal proteins of breast cancer cells
CS378_22810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
ATQ31292
LinkDB
All DBs
Position
4984643..4986160
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AA seq
505 aa
AA seq
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MASVLDPVLAHADAAPERIALRTRDGQRSYRELRDDALRYGALLRSRGVAAGDRVLLLAP
SVPEFVVAYLGIQAVGAVVVPVNTMSTAAELRYTLGDSRAVLAIAWHAASGSVAEAAEGL
GVPWLSLEPGAAVEQEPGDPVDRADGDTAAVLYTSGTTGRPKGAQLTVSNLLSAGRISCR
LSESGPEDRVGTGLPLFHIFGQASVMMSAFTAGASLSLLSPFDPAAMLDLVVRDRLTVVC
GVPTMWNAMLHAESPYGPADFAGLRLAVSGGASLPGEVARDFEHRFGCTIREGYGLTETT
AMATFSWGDVPARIGYSGTAAPDIEVEVYGPDGVACGPGEVGEVFVRGPVVMAGYWQRPA
DTAAVLDDEGWFRTGDLGEFDEQGRLRIVDRVKDLVIRGGYNVYPSEVEEVLYEHPDVVE
AAVVGVPDRHYGEEIAAVVVLRDDAGAGAEDLVRWCRERLSAYKAPRIVRFVDALPKGAS
GKILKRAIDRDELSRFVVRRSESAV
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggccagtgttctcgaccccgtcctcgcccacgcggacgcggcgccggaacgcatcgcc
ctgcgcacgcgggacgggcagcggagctaccgcgagctgcgcgacgacgcgctgcgctac
ggcgcgctgctccgcagccgcggcgtcgccgccggcgaccgggtgctcctgctcgctccc
tccgtgcccgagttcgtggtggcctacctcggcattcaggcggtcggtgccgtggtggtg
ccggtgaacaccatgtccaccgcggccgaactgcgctacaccctcggggattcgcgggcc
gtgctcgcgatcgcctggcatgccgcctccggctcggtggccgaggccgcggaggggctc
ggtgtgccgtggctgtcgctggagcccggcgccgcggtcgaacaggagcccggcgacccc
gtcgaccgtgccgacggcgacaccgcggcggtgctgtacacctcgggcaccaccggccgc
ccgaagggggctcagctcaccgtctcgaatctgctgtctgcaggacgcatttcgtgccga
ttgtccgaatcgggacccgaggatcgagtagggaccgggctgccgctgttccacatcttc
ggccaggcgtcggtgatgatgtcggccttcaccgcgggggcctccctgtccctgctgtcc
ccgttcgatccggcggcgatgctcgacctcgtcgtccgggaccggctgacggtggtgtgc
ggggtgccgaccatgtggaacgcgatgctgcatgccgaatctccctacggaccagcggac
ttcgcgggactccggctggcggtgtcggggggagcgtcgctgccgggggaggtggcccgt
gacttcgagcaccgcttcggctgcaccatccgggagggatacggcctgaccgagaccacg
gccatggcgaccttctcgtggggggacgtcccggcgcgcatcgggtacagcggcaccgcg
gccccggacatcgaggtcgaggtctacgggccggacggcgtcgcgtgcggcccgggggag
gtgggcgaggtgttcgtccgcggacccgtcgtcatggccggctactggcagcgaccggcc
gacaccgcggccgtgctcgacgacgagggctggttccgcaccggcgatctcggggaattc
gacgagcagggccggttgcgcatcgtcgaccgggtcaaggacctcgtcatccggggcggc
tacaacgtgtatcccagcgaggtggaggaggtgctctacgagcatcccgacgtggtcgag
gccgccgtggtgggcgtgccggaccgccactacggcgaggagatcgccgcggtggtcgtg
ctgcgcgacgacgccggcgccggtgccgaggacctcgtgcgctggtgccgggaacggttg
tccgcctacaaggcgccccgcatcgtccgcttcgtggacgccctgccgaagggggcgtcc
gggaagatcctcaagcgggccattgaccgggacgagttgtcccggttcgtcgttcgccgt
tccgagtcggcggtgtga
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