Rhodococcus ruber: CS378_22870
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Entry
CS378_22870 CDS
T05142
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
rrz
Rhodococcus ruber
Brite
KEGG Orthology (KO) [BR:
rrz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rrz03400
]
CS378_22870
DNA repair and recombination proteins [BR:
rrz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CS378_22870
Archaeal homologous recombinant proteins
CS378_22870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_27
AAA_29
SMC_N
AAA_15
Motif
Other DBs
NCBI-ProteinID:
ATQ31302
LinkDB
All DBs
Position
4997432..5000407
Genome browser
AA seq
991 aa
AA seq
DB search
MRLHQLEVTAFGPFADTVRVDFDELGADGLFLLHGRTGAGKTSILDAVAFALYGTVPGAR
ADGRRLLSDHAPAGTAPQVSLEATVAGRRLRIVRSPDYERPKLRGTGTVKQNAKASLTWL
DGSGEHLSRLPDIGEAVRRLLGMSAEQFFQVVLLPQGEFAKFLRADSEDRGKLLERLFDT
TRFGSVERWFKDRRSAAATRLEEQQRAVDLLLAKVSAAAGLEAGADSEPVVWAHRLRDDA
AENRDLALAALDRARADDIRDRAALAEATELRRCQERRARAVAELAELDAAAAELQTLTA
ELDTARRAAPVVEIARDAHRAAEAAATAHAAAVDAAAPLAADREGRALVAQLDGSPADAD
RGLIRPHEQRWSAEVVRLDGLLEQEQRLILLETDRAALQQQRRDLAVRAERIAEELDELP
GRRDAAEKAARESEQAAATLPRLEADLTRTSDALAAATELQNLAPQLHRLEDEVVARRDA
HLDARTALLDVRERRIAGMAAELATALVDGHPCVVCGATAHPSPARPAPDTATKADEDAA
RDAEQRAGAELTRAQAAVADLANTVAVLRQRCGDAGLEELTEARAGAAAAHAAAAATAAE
CERRRGEIARLRQLDADLREQAHAVDVEAAQAAHREESAAAEADEIRARITAAAGDADSL
ATRRRRIATLAAAAANLLDARVRAANEATSARERAREAAAAAERAGFASVEQALAAVRPE
ARLREIDQVLRAAADRRAAAQGVLDDPDTARVGDDPVDLAEPEGAVARSAAALAAAVSAA
SEAERRHADIEKFATRLEDEYAKLVPLRDEQAELAALAEVVAGTGQNARKMSLRSYVLAA
RLEEVAESASVRLRRMSGGRYEFVHSDAAGTHGKRGGLGLDIHDEYTGVVRSTKTLSGGE
SFQASLALALGLADVVAAESGGLVLDTMFIDEGFGTLDADALDAVMGVLDELRAGGRVVG
VVSHVDEMRQRIPSRLHVVRGRAGSTVEIAG
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
gtgaggctgcaccagctggaggtcaccgcgttcggcccgttcgccgacaccgtgcgggtg
gacttcgacgaactcggcgccgacggactgttcctgctgcacggccgcaccggcgccggc
aagacctccatcctcgatgcggtggcgttcgccctgtacggcacggtgcccggggcccgc
gccgacgggcgccggctgctgtccgatcacgcacccgccggcaccgcaccccaggtgagc
ctcgaggcgaccgtcgccggccggcggctgcggatcgtgcgcagccccgactacgagcgt
ccgaagctgcgcggaaccgggaccgtcaagcagaacgccaaagcgagcctgacctggctc
gacggctcgggtgagcacctctcccggctgcccgacatcggggaggccgtccggcggctg
ctcgggatgagcgccgagcagttcttccaggtcgtgctgctgccgcagggcgagttcgcg
aagttcctgcgcgccgacagcgaggaccgcggcaagctgctcgagcggctgttcgacacc
acccgattcggctccgtcgaacgctggttcaaggaccggcgcagtgccgcggccacccgc
ctcgaggaacagcagcgtgccgtcgacctgctcctcgccaaggtcagcgcggccgccggc
ctcgaggcgggcgccgactccgaaccggtcgtgtgggcgcatcgactgcgcgacgacgcc
gccgagaaccgggacctcgcgctggcggcactcgaccgtgcgcgcgccgacgacatccgc
gatcgggcggccctcgcggaggcgaccgagctgcgacggtgccaggaacgccgcgcccgc
gcggtcgccgagctcgccgagctggatgccgcggccgccgagctgcagactttgaccgcc
gaactcgacacggcccggcgggcggcgccggtcgtcgagatcgcccgggacgcgcaccgc
gccgccgaagccgccgccaccgcccatgccgccgcggtggacgcggccgcgcccctcgcc
gccgaccgggagggtcgggccctcgtcgcgcagctcgacggttcccccgccgacgccgac
cgcggactgatccggccccacgaacagcgttggtcggcggaggtggtccgcctcgacggc
ctgctcgagcaggagcagcggctgatcctgctcgagaccgaccgcgccgccctgcagcag
cagcgccgcgatctggcggtgcgcgccgaacggatcgccgaggaactggacgaactcccc
ggtcgccgcgacgctgcggagaaggccgcgcgcgagtccgagcaggccgccgccacgctg
ccccggctcgaggccgacctcacgcgaaccagcgacgccctcgccgccgccaccgaactg
cagaacctggccccgcagctgcaccggctcgaggacgaggtcgtcgcccgtcgcgacgca
cacctcgacgcgcgcaccgccctgctcgacgtgcgtgagcgccgcatcgccgggatggcc
gccgaactggccaccgcgctggtcgacgggcatccgtgcgtggtgtgcggagccaccgct
catccgtccccggcccggccggcgccggacaccgccaccaaggcggacgaggacgcggcc
cgggacgccgagcagcgagccggcgcggaactgacgcgggcgcaggcggccgtcgcggac
ctcgccaacaccgtcgcggtgctgcggcagcgctgcggcgacgccggtctcgaagaactc
accgaggcgcgggccggggccgccgccgcgcacgccgcggcggcggccaccgcggccgaa
tgcgagcgccgccgcggtgagatcgcgcggctgcgccaactcgacgccgacctgcgcgag
caggcgcacgcggtggatgtcgaggccgcccaggctgcgcaccgcgaggagagcgccgcc
gcggaggccgacgagatccgtgcccgcatcaccgcggcagccggggacgcagactccctc
gccacccgccggcgtcggatcgcgacgctcgccgccgccgcggcgaacctgctcgacgcc
cgggttcgggccgcgaacgaggcgacgagcgcgcgcgaacgtgcccgggaggcggccgca
gccgcagaacgggcgggattcgcgagcgtcgagcaggccctggcggccgtccgtcccgag
gcgcgtctgcgcgagatcgaccaggtgctgcgcgcggcggccgaccggcgcgcggcggcg
cagggcgtgctcgacgacccggatacggcacgggtcggcgacgacccggtggacctggcc
gaaccggagggcgcggtcgcgcgcagtgcggccgcactggccgcggccgtctccgcagcc
tccgaggccgagcgacgccacgccgacatcgagaagttcgcgacgcgcctcgaagacgag
tacgcgaagctggtgccgctgcgggacgagcaggccgaactcgcagccctcgccgaagtc
gtcgcgggcaccgggcagaatgcgcgcaagatgtcgctgcgctcgtacgtcctcgcggcc
cgcctcgaggaggtcgccgaatcggcctcggtgcggctgcggcgcatgtccggtggccgc
tacgagttcgtgcactccgatgcggcaggcacgcacggcaagcgcggtggcctcgggctc
gacatccacgacgaatacaccggtgtggtgcggtccacgaagaccctctcgggcggcgag
tcgttccaggcgtcgctggcgctggcgctcgggctcgcagatgtcgtcgccgccgaatcc
gggggactggtgctcgacacgatgttcatcgacgaggggttcggcacgctcgacgccgac
gcgctcgacgcggtgatgggcgtgctcgacgaactgcgcgccggcggccgggtggtcggc
gtggtcagccacgtcgacgaaatgcgtcagcgtatccccagccgcctgcacgtcgtgcgc
ggccgcgccgggtccacggtggagatcgccggctga
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