Rhodococcus ruber: CS378_24415
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Entry
CS378_24415 CDS
T05142
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
rrz
Rhodococcus ruber
Brite
KEGG Orthology (KO) [BR:
rrz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rrz03400
]
CS378_24415
DNA repair and recombination proteins [BR:
rrz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
CS378_24415
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Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
DUF559
DUF5014
Motif
Other DBs
NCBI-ProteinID:
ATQ31578
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Position
5346384..5346863
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AA seq
159 aa
AA seq
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MSRNGANTPPGKARGRETYPRASNAGRSRNMRAIRRSNTKPEVRLRSALHRKGYRFRKDY
RLDLGASRVRPDIVFTARKIAVFVDGCFWHVCPIHGRQPTVNEWYWSPKLLRNVERDRQA
DELLAAGGWTVVRVWEHESLEHAMELVERALLRSSDAAN
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atgagccgaaatggagcgaacacgccccctggtaaggctaggggtcgtgaaacctacccg
cgcgcgagcaacgccggcaggtcgcggaatatgcgggctatccgcaggtccaatacgaaa
ccggaagtgcggttgcgcagtgccttgcatcgcaagggctaccgatttcgaaaggattac
cggctagacttgggagcatctcgagtccggccggatatcgtattcacggcccgcaagatt
gcggtctttgtcgacggctgcttttggcatgtatgtcctattcatggacggcagccgacc
gtaaacgaatggtactggtctccgaaactattgagaaacgtcgaacgtgacaggcaggcg
gatgaactcctcgctgctggagggtggactgtagttcgggtatgggaacatgaatctctc
gagcacgcaatggaattggtcgagcgggcgctactgcgctcgagcgatgcagcaaattga
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