Renibacterium salmoninarum: RSal33209_0027
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Entry
RSal33209_0027 CDS
T00641
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rsa
Renibacterium salmoninarum
Pathway
rsa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rsa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RSal33209_0027 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsa03019
]
RSal33209_0027 (recQ)
03400 DNA repair and recombination proteins [BR:
rsa03400
]
RSal33209_0027 (recQ)
Enzymes [BR:
rsa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RSal33209_0027 (recQ)
Messenger RNA biogenesis [BR:
rsa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RSal33209_0027 (recQ)
DNA repair and recombination proteins [BR:
rsa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RSal33209_0027 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Pribosyltran
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
ABY21785
UniProt:
A9WL71
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All DBs
Position
complement(24766..26919)
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AA seq
717 aa
AA seq
DB search
MSGLPGILHSMSAASEKTRIDAQKILATLVGAPEADFHPGQFEAIEALVDGGRRALVVQR
TGWGKSAVYFVASLLLRARGAGPTLIVSPLLALMRDQVAAAARAGVRAVAINSANATEWD
LVRDALAADEVDVLLVSPERLNNPRFRDEQLPDLIRRTGLLVIDEAHCISDWGHDFRPDY
RRIAELISQLPGTVPVLATTATANSRVVADIEEQLAEQVLTIRGPLARKSLRLGVLRLND
SRDRLGWLLSHLEDLPGSGIIYTLTVSAAEDAARLLAERGHKVLAYTGRTDTAERENAEQ
LLKDNQVKALVATSALGMGFDKPDLGFVVHLGALSSPVAYYQQIGRAGRSTENADVVLLP
GSEDQDIWKYFATASMPSQVNADAVLQTLAEAGAAMSSAAIEVRVDVRRTPLELLLKVLA
VDGAVERVSGGWRATGQPWNYDAERYARIAQSRVDEQDSMLVYEETAGCRMEYLAAALDD
STATPCGRCDNCAGRWFSAEVRGSELEAAAQTLRRAGLALEPRAQWPSGMDRLGVPVKGK
IPADQLFAEGRVLARLTDLGWGGPLRERFAEGAPDAPISEELLAACVEVMKDWAAEGWSG
AGRPAAVVSVPSRSKPLLTRSFAEGIARIGQLPYLGELAILDGGPTGSRGGNSAYRLAGL
WERFAVPAGITAELPAEQTVLLIDDLVDSRWTLTITARALRQAGVGSVLPFVLAQSG
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
ttgtcggggctgcctggaatacttcactctatgagcgctgcgagtgagaaaacccggatc
gatgcccagaaaattctcgccactttagtaggtgcgccagaagcggacttccatccgggt
cagtttgaagcgatcgaagcactagtcgacggcggacggcgagccttggtggtacagcgc
accggttgggggaaatccgcggtttactttgttgcgtcgttgctgctgcgggctcgcggg
gccggtccgacgctgatagtttcgccgctgctggccttgatgcgagaccaagtggcggca
gctgcccgtgctggcgtgcgcgccgtcgccatcaactcagcaaacgcgacggaatgggat
ctagtccgggacgcgctcgccgctgatgaagttgatgtattgctggtctcaccggagcga
ctcaataacccgcgctttcgagatgagcagttgccggatctgatccgccgaactggtttg
ctcgtgatcgacgaggcgcactgtatttcagactggggccatgacttccggccggattac
cggcgaattgccgagctgatctcgcaattaccaggcacagtccctgtgctggcaacgacg
gcgaccgcaaattcgcgcgttgtggcagacatcgaagagcaactagccgaacaggtcctc
acgattcgtggcccgctagcgcgcaaatcgctgcgcttgggcgtgcttcgcctcaatgac
tctcgcgatcgactgggctggctgttgagtcatctggaagacctgcccggcagcgggatt
atctacacgttgacggtttctgctgccgaagacgcggctagactattggccgagcgcggt
cataaagttcttgcttataccggtagaactgacacagctgagcgtgaaaatgccgagcaa
ttactcaaggacaaccaggtcaaggcgcttgtggccaccagtgcgctcgggatgggcttt
gataagccggacttgggtttcgtagtgcacttgggtgcactgtcgtcccccgttgcttac
tatcagcagattggccgtgccggtcgtagcaccgaaaatgctgatgtggtgttgcttccg
ggtagtgaagatcaagacatttggaagtattttgctaccgcctcaatgccatcgcaagtt
aatgccgatgcggttttgcagaccttggccgaggcaggagcagcgatgtctagtgcggct
attgaagtgcgagtcgatgtccgcaggactccgttggaattgttgctcaaagtcttggcg
gtagacggcgcggtggagcgggtttctggcggctggcgagccaccgggcagccgtggaat
tacgatgcggagcgttatgcccgaattgcgcagtcccgagtagatgagcaggattcgatg
cttgtctacgaagaaactgctggttgtcggatggaatacttggccgctgccttggatgat
tcaacggccacaccatgcggtcgttgcgataactgtgctggacgctggttctcggctgaa
gttcgtggcagcgaattggaagcggcagctcaaacccttcggcgcgcaggtttggcgctg
gaaccgcgtgcgcaatggccctctggtatggaccgactcggcgtgccagtcaaaggaaaa
atcccggctgatcaacttttcgctgaaggtcgagtcctggccagacttaccgatttgggc
tggggtgggccgctcagagagcgctttgcagagggtgctccggatgcgccgatcagcgaa
gagctccttgccgcttgcgtggaagtgatgaaagattgggcggctgagggctggtcggga
gctggccgacccgctgcggtggtgtcggttccctcacgcagtaaaccgctgcttacgcga
tcttttgcggaaggaatcgcgcggattggtcagttgccttatttaggtgagttggcaatt
ctcgacggcggcccaaccggctcgcggggcggcaatagcgcgtatcggctcgccggcttg
tgggagcgatttgcagtaccggctggtattaccgcggagttgccagcagagcagacggtg
ttgctgattgatgacttggtggacagtcgttggacgctcaccattaccgcccgcgcgctc
cggcaggctggcgttggcagcgttttgccttttgttttagcgcagtccggttaa
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