KEGG   Renibacterium salmoninarum: RSal33209_0074
Entry
RSal33209_0074    CDS       T00641                                 
Name
(GenBank) ATP-dependent helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
rsa  Renibacterium salmoninarum
Brite
KEGG Orthology (KO) [BR:rsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rsa03400]
    RSal33209_0074
Enzymes [BR:rsa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     RSal33209_0074
    5.6.2.6  RNA 3'-5' helicase
     RSal33209_0074
DNA repair and recombination proteins [BR:rsa03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    RSal33209_0074
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr DEAD Helicase_C ResIII DUF6406 AAA_22 Asparaginase_C Cas3-like_C_2
Other DBs
NCBI-ProteinID: ABY21830
UniProt: A9WLQ0
LinkDB
Position
63045..65951
AA seq 968 aa
MLCTGLCRTLEISRGVSILPLASDYLAAPTVCCGHTAGVFLSVQYAMMVAMSNSALDLFS
APTRAWFEGAFSQPTPAQTGAWQAIASGANALVVAPTGSGKTLAAFLWSLDSLIKAHAEV
AASERIGTQVLYISPLKALGIDVERHLRAPLIGLRQNALRQGAEVPEVSVGVRSGDTPAN
ERRKLLSHPPEILITTPESLFLMLTSQAKQTLKTVRTVIIDEVHAVAGTKRGAHLAVSLE
RLDTLLTGSEGTGKAAQRIGLSATVEPLSTVARFLSGEAPCEIVAPPASKTWNLQVTVPV
EDMSDLASAAAAHDLGPASGLQPNASIWPHVEERIVDLVLANRSTIVFSNSRRLAERLTG
RLNEIYTERIEAKEENSAPLPDSPMPAHIMGQAGSTAGSEPILAKAHHGSVSKEQRALIE
DDLKAGRLRCVVATSSLELGIDMGLVDLVIQVESPPSVASGLQRVGRAGHQVGEVSQGVL
FPKHRADLVHSTVTVERILAGNIEPLFIPANPLDILAQQTVAATALGSLDVEEWFSTVRR
SAPFSALPRSAFDATLDLLAGRYPSDEFAELRPRIVWDRNAGTITGRPGAQRLAVTSGGR
IPDRGLFGVYLVGAEEGKNSRRVGELDEEMVYESRVGDVFALGATSWRIEDITHDRVLVS
PAFGQPGRLPFWKGDSLGRPVTLGRAIGAFMREVSAASPKVATERCAAIGLDNYATGNLL
GYLSEQAEATGVVPDDRTLVIERFHDELGDWRIVLHSPFGMPVHAPWALAVGARLHERYG
LDGSAMAADDGIVLRVPMMDDEPPGAELFIFDADEIEQIVTDQVGGSALFAARFRECAAR
ALLLPRQNPAKRSPLWQQRQRSAQLLDVAKKYPTFPIILENVRECLQDVYDLPALKDIAS
AIARRELRMTETTTQQPSPFARSLLFGYVESFLYEGDSPLAERRAAALSLDPALLLTSYL
AEQSCASS
NT seq 2907 nt   +upstreamnt  +downstreamnt
ttgctttgcaccggtctttgccgaaccctggaaatatcgcggggcgtcagtattttgccg
ttagcttcagattacctcgcggcgccgacagtgtgttgcggacacaccgcaggagtgttt
ctgtcagtgcaatacgcaatgatggtagctatgagcaattctgcccttgaccttttcagc
gcgccaactcgcgcctggttcgagggcgccttttcgcagccgacgccggctcaaactggc
gcttggcaggctattgcaagcggcgcaaatgccttggtggtcgcgcccactggttccggc
aaaacgctagcggcgttcctctggtcgctagattcgctcatcaaagcgcatgcggaggtc
gccgcttctgagcggattggcactcaggtgctttacatttctccgctcaaggccttgggc
attgacgtcgaaaggcatctgcgcgctccactgatcggtttgcggcaaaacgccttacgg
cagggcgccgaagttccagaagtcagcgttggggtgcgaagtggtgatactcccgccaat
gagcgccggaaattacttagccatccaccagaaatcttgatcaccactccagagtcactt
tttctgatgctgacatcgcaagcaaaacaaactttgaaaacggtacgtaccgtgatcatc
gacgaggtccacgcggttgctggcaccaaacgcggcgctcatctggcagtttccctcgaa
cggctagacaccttgctcaccgggtcggaaggtactggcaaagctgcccaacgcatcgga
ctatccgcaacggttgaaccgctcagcaccgttgctcggttcctgtccggcgaagcgccg
tgtgaaattgtggcaccaccggcgtcgaaaacctggaatctgcaggtcacggtaccggtg
gaggacatgtcagacctcgcttcagctgccgctgcgcacgaccttgggccggcctcgggg
ctgcaacccaatgcctcaatctggccacacgtggaagaacgaatcgtggacctggtgtta
gcgaatcgctcaaccatcgtcttctctaactctcgacgtcttgctgaaaggttaaccggc
aggctcaatgagatctacaccgaacgcatagaggctaaggaagaaaacagcgctccgctg
ccggattcgcccatgccagcgcacatcatgggccaggcaggtagcacggctggcagtgag
ccaatacttgcgaaggcccatcatggttcggtctccaaagaacagcgcgcgctgatcgaa
gatgatctgaaggctggcagattgcgctgcgtggtggccacttctagcttggaactcggc
atcgacatgggcctagtggacttggttatccaagttgaatcaccacccagcgtcgccagc
ggtttgcaacgagtgggccgagctggccaccaagtcggtgaagtatcgcagggtgtgctg
ttcccaaaacaccgcgcggacttggtacactccactgtcaccgtggaaaggatacttgct
ggcaatatcgagccgcttttcatccccgcaaatcctttggatatcttggcgcagcaaacc
gttgccgcaacagccctaggcagcctggatgttgaagaatggttcagcacagttcgacgc
agtgcacccttttccgcgctgcctcgatctgcgttcgatgcgaccttggatctactcgct
gggcgttacccctccgatgaattcgcggagctacgcccgcgcatcgtctgggatcgcaac
gccggcaccatcaccggcaggccaggggcacaaaggctcgccgtcacttctgggggcaga
attccagatcgcgggctctttggcgtctatctagttggcgctgaggagggaaaaaattca
cgccgggtgggcgagctcgacgaggaaatggtctacgagtccagagtcggcgacgttttc
gctttgggcgcgaccagttggcgaatcgaagacattacacacgaccgcgtgctggtctca
cccgcattcggccagcctggtcgattacccttttggaagggcgactccttaggccgcccc
gtgacactgggccgcgccatcggcgcctttatgcgcgaggtctcagcagcatcaccaaaa
gtggccaccgagcgttgtgccgcgattggcttggacaactacgcaaccgggaacctcctc
ggttatctatctgagcaagccgaggctaccggcgtcgtacctgacgaccggaccttggtc
atcgaacgttttcatgacgaattaggcgactggcgaattgtgctgcacagcccctttggc
atgccagtccatgccccctgggcactcgcggtaggcgcaagacttcatgagcgctacggt
cttgatggctcagctatggcggctgacgacggcatagtgctgcgggtgccgatgatggac
gatgagccaccgggcgctgagttgttcattttcgacgccgacgaaatcgaacagattgtc
actgaccaggtgggcggatcggcacttttcgctgccagattccgcgaatgcgctgcgcgt
gcgttgcttctgccccgtcaaaaccccgcaaaacgatcgccgctgtggcagcaacggcag
cgctctgcccagctactcgatgtagccaaaaaatacccaacctttccgattatcttagaa
aacgtgcgggaatgcctgcaggatgtctacgatctgccagcgttgaaagatattgccagc
gcaattgctcggcgtgagcttcggatgacggaaactaccacccagcaaccatcaccgttt
gctcgctcgctgctctttggctacgtggaaagttttctttatgaaggcgattcaccgctt
gccgagcggcgcgcagcggcgctctcactcgaccccgcactacttttaacgagctacttg
gccgagcagagctgcgcgagctcttag

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