Renibacterium salmoninarum: RSal33209_1768
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Entry
RSal33209_1768 CDS
T00641
Name
(GenBank) 60 kDa chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rsa
Renibacterium salmoninarum
Pathway
rsa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rsa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RSal33209_1768
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsa03019
]
RSal33209_1768
03110 Chaperones and folding catalysts [BR:
rsa03110
]
RSal33209_1768
03029 Mitochondrial biogenesis [BR:
rsa03029
]
RSal33209_1768
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rsa04147
]
RSal33209_1768
Enzymes [BR:
rsa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
RSal33209_1768
Messenger RNA biogenesis [BR:
rsa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RSal33209_1768
Chaperones and folding catalysts [BR:
rsa03110
]
Heat shock proteins
HSP60 / Chaperonin
RSal33209_1768
Mitochondrial biogenesis [BR:
rsa03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
RSal33209_1768
Exosome [BR:
rsa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RSal33209_1768
Exosomal proteins of other body fluids (saliva and urine)
RSal33209_1768
Exosomal proteins of breast cancer cells
RSal33209_1768
Exosomal proteins of colorectal cancer cells
RSal33209_1768
Exosomal proteins of bladder cancer cells
RSal33209_1768
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF4142
CbiA
Motif
Other DBs
NCBI-ProteinID:
ABY23503
UniProt:
A9WN14
LinkDB
All DBs
Position
complement(1532934..1534550)
Genome browser
AA seq
538 aa
AA seq
DB search
MAKQIEFNDAARKSLEAGVDRLANAVKVTLGPRGRNVVLDKKWGAPTITNDGVTIAREIE
LDDPYENLGAQLAKEVATKTNDVAGDGTTTATVLAQALVKEGLRNVAAGAAPSALKHGIE
VSVEAIAGRLLENTREVAGGQVASVAAISAQSPEIGELLAEAFDKVGKDGVITIEESSSM
VTELVLTEGMQFDKGYLSPHFVTDHERQEAVLEDALILINQGKISSIQEFLPLLEKTLKA
SKPLFIIAEDVDGEALSTLIVNRLRGNLNVVAVKAPGFGDRRKAMLQDIAILTGAQVVSP
EIGLSLDQVGLEVLGTARRITVTKDNTTIVDGAGTDADVADRVSQLRAELERTDSDWDKE
KLQERLAKLAGGIGVIKVGAATEVELKEKKHRIEDAVSSTRAALEEGIVAGGGSALVQAA
KALDENAEVKALEGDAVTAVNLVRRAVAQPLRWIAENAGHDGYLVISKVAELPDGHGFNA
ATGEYGDLIAQGVIDPVKVTRSALRNAASIAALVLTTEALVVEKPEEDESDSHAGHQH
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggctaagcagattgaattcaacgacgcggctcgcaagtctcttgaagccggcgttgac
cgtctggctaacgcggtcaaggttacccttggcccgcgcggacgcaacgttgttttggac
aaaaagtggggcgcccccacaatcactaatgacggcgtaaccattgcgcgcgagatcgag
cttgatgatccgtatgagaaccttggcgcgcagttggccaaggaagttgccactaagacg
aacgacgtggccggcgacggcaccacgacggcgactgtgctggcacaggctctggtcaaa
gagggcttgcgcaacgttgctgccggtgctgcaccgagcgcgctcaagcacggcatcgag
gtttcagtagaagctatcgccggccggttgctggaaaatactcgcgaagttgctggcgga
caggttgcttcggtagccgcaatttccgcgcagagcccggaaattggcgaactgctggct
gaggcattcgacaaggtcggcaaagacggcgttatcaccattgaggaatcctcctcgatg
gtgactgagctggtactcaccgagggaatgcagtttgacaagggctacttgtcgccgcat
ttcgtcaccgaccacgagcgtcaagaagccgtgctcgaagatgctcttatcctgatcaac
cagggtaagatctcttcgattcaggaattcttgccgcttttggaaaagaccctcaaggct
tctaagccgctgttcatcatcgctgaagacgtagatggtgaagcgctttccacgttgatc
gtgaatagattgcgtggaaacctcaacgtcgtggcagtgaaagctcctggctttggcgat
cgtcgcaaggcgatgctgcaagacattgccattctgaccggtgcacaggttgtctctccg
gagattggtctgtcacttgatcaggttggtcttgaggttttgggtaccgcgcgccggatc
accgtcaccaaagacaacaccacgattgtcgatggtgctggaactgatgccgacgtcgct
gatcgcgtttcgcagttgcgcgctgaactagagcgcaccgattcggattgggacaaagag
aagctgcaggagcggttggccaagttggctggcggcattggcgtgatcaaggttggcgca
gccaccgaggtcgagctgaaggaaaagaaacaccgcatcgaagatgcagtttcttccacc
cgcgcagcactcgaagagggcattgttgccggcggcggttctgcgctggttcaggccgct
aaagcacttgatgagaatgctgaagtcaaggcgctcgaaggcgatgcagtaactgcagtc
aacttggttcgccgcgcagtagctcagcctttgcgctggatcgctgaaaacgccgggcac
gatggctacttggtcatcagcaaggttgccgaactgcccgatggtcacggtttcaatgcc
gcgaccggcgagtatggcgatctgattgcccagggtgttattgacccggtaaaggtcact
cgttccgcactgcgtaacgccgcttcgatcgctgctctggtgttgaccaccgaagcactc
gtagtggagaagccagaagaagacgagtcagactcacacgcaggtcaccagcactaa
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