Renibacterium salmoninarum: RSal33209_2115
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Entry
RSal33209_2115 CDS
T00641
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
rsa
Renibacterium salmoninarum
Brite
KEGG Orthology (KO) [BR:
rsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rsa03016
]
RSal33209_2115
Enzymes [BR:
rsa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
RSal33209_2115
Transfer RNA biogenesis [BR:
rsa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RSal33209_2115
Prokaryotic type
RSal33209_2115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
ABY23847
UniProt:
A9WSQ9
LinkDB
All DBs
Position
complement(1876046..1876939)
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AA seq
297 aa
AA seq
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MLDQEPTEPRKGGGGFLRLRLDLAYDGAPFSGWALQPERLTVQGVLEDSLAMILRRLVRV
TVAGRTDAGVHARGQVVHAEFYPHEWEQIARRSTASPEEAVLRRLRGALSRVLGEQTGAV
VVHSVRPAEPGFDARFSALWRRYSYHIADRPAQWDPVQRQMTWWHKTELDVELLNLAVQP
LLGLQDFRAFCKPRPGATTVRELQRLEFSRQPDGTIKVAVQADAFCHNMVRALIGSAVQV
GSGEQSPDWLAERLAIKVRDAKSGLAPPHPLVLEEVHYPKGADLLIRADMTRARREP
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgctcgatcaggaacccaccgaaccccgtaaagggggcggtgggttccttcgtttaagg
cttgatctagcttatgacggtgcgccgttttccggctgggccttacagcctgagcgtttg
acagttcagggcgttctggaagattcgttggcgatgatattgcgtcgattggtacgagtc
actgttgccgggcgcacagacgctggcgtgcatgcgcgcggtcaggtggtccatgcagaa
ttctacccgcatgagtgggagcaaatagcgcgcaggagcactgccagccccgaggaggca
gtgttacgccgattgcgcggcgcgttgtcccgggttcttggtgagcagaccggtgccgtg
gtggtgcattctgttcgtcctgcggaacctggattcgatgccagattctccgccctctgg
cggcgttacagttatcacattgcggatcggcctgcgcagtgggacccggtacagcgtcag
atgacctggtggcacaaaactgagctcgacgtcgaactcttgaatttggcggtacagccg
ctattgggcttgcaagacttcagagctttctgtaagccgcgtcccggcgcgacaacggtc
cgagagctacagcggctggaattcagcagacagcctgacgggacgatcaaggtcgccgtc
caggctgacgcgttttgccacaatatggtccgggcgctcatcggttcagcggtgcaggtt
ggcagcggcgaacagagcccagactggctagccgaacgtctggcgatcaaagttcgcgac
gcaaaatctgggctggcgccaccccatcccttagttttggaagaagtacattatccgaag
ggtgcggatctgctgattcgagcggacatgactagggcgcggcgggaaccataa
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