Renibacterium salmoninarum: RSal33209_2281
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Entry
RSal33209_2281 CDS
T00641
Name
(GenBank) ABC transporter, transmembrane region
KO
K18888
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
rsa
Renibacterium salmoninarum
Pathway
rsa02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rsa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RSal33209_2281
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rsa02000
]
RSal33209_2281
Transporters [BR:
rsa02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
RSal33209_2281
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_22
SMC_N
AAA
AAA_16
ABC_membrane_2
RsgA_GTPase
TsaE
AAA_23
AAA_24
AAA_30
MMR_HSR1
AAA_29
NTPase_1
nSTAND3
DO-GTPase2
DUF87
AAA_14
NB-ARC
AAA_33
FtsK_SpoIIIE
AAA_28
NACHT
AAA_18
cobW
AAA_7
AAA_5
KAP_NTPase
Motif
Other DBs
NCBI-ProteinID:
ABY24012
UniProt:
A9WT74
LinkDB
All DBs
Position
complement(2019599..2021539)
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AA seq
646 aa
AA seq
DB search
MSMMGRGGPPQKATAFGPSLKRILGLMKPDRLRMTWLVFLAAVSVLLSVAAPKVLGHATD
LIFQGIIGKMLGANFPAGTSKAQAVAALRAGNQGQLADLVNGTDAVIGQGIDFQALGWVM
LSVLMLYAISFFFNWSQGYITTGIVQRAMYRLRQDIEAKLDRLPMSHFQEASRGDVLSRV
TNDINNFSQTLNQTLTQLLMSVLTVIGVIAMMFSISWSLALIALCSVPLIAGITVLVAKR
SRVQFMAQWKTTGELNGHIEEMFTGHEIVKAFGQQKAAIAKFEVANQGLYKSSSKAQFIS
GVIMPSTGFVSNLSYVAIAVVGALQITAGQITLGSVQAFIQYSRQFSQPIAQIGGMINLL
QSGVASAERVFTLLDEKEQSPDFQPAAKLGRPGEPIQGRVVFDHVNFKYKDDEPLITDLS
LVAEPGQTVAIVGPTGAGKTTLVNLLMRFYDIDSGKISIDGVDAAQMSRDDVRQRFGMVL
QDAWLFSGTIRENLVYGRLDASEADIVEAAEATYVDHFVRALPDGYDTVLSDDGDSLSQG
QRQLMTIARAWLANPSILILDEATSSVDTRTEVLIRNAMNRLREDRTSFVIAHRLSTIRD
ADLILVMDHGRIIEQGTHEQLLVAKGFYEKLYKSGYEAPATEDVQT
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgagcatgatgggccggggcggtccgccgcaaaaagcaacagcgtttggtccgagcctc
aaaaggatccttggtctgatgaagccggaccggctccggatgacctggctggttttctta
gccgcagtgtccgtattgctatctgtggccgcaccaaaagtattgggccacgcaacagac
ctgatcttccagggcatcatcggcaaaatgttaggcgcaaacttcccagctggcactagc
aaggcgcaagctgttgcggcattgcgagcagggaatcaaggccaacttgccgacttagtc
aatggcacggatgccgtgattggtcagggcattgattttcaagcccttggctgggtgatg
ctttccgtgctgatgctgtacgccatctccttcttcttcaattggagccagggctacatc
accacgggcattgtgcaacgtgcaatgtaccggcttcggcaggacatcgaagcgaagctg
gaccgcttgccgatgagccattttcaagaagcttcgcgcggagacgtgctcagccgggta
actaacgacatcaacaacttctcgcagacgctgaaccagactctgacgcaattactaatg
tccgtactgactgtaattggcgttatcgccatgatgttttcgatctcttggtccttggcg
cttattgcgctgtgctcggtgccgctcatcgccggaattaccgtcttggtggccaagcgc
tcgcgtgttcagttcatggcgcagtggaagaccactggtgagctcaatggtcacatcgaa
gagatgttcaccggccacgaaattgtcaaggcattcggccagcaaaaggctgcgatcgca
aagtttgaggttgccaatcaaggtctctacaaatccagctcgaaggcacagttcatatct
ggcgtaatcatgccttcgaccgggtttgtctccaacctgagttacgtggcaatcgcggtg
gtcggtgccctgcagatcaccgcggggcaaattaccttgggctcggttcaagcctttatt
cagtactcacgccaattcagtcagccgattgctcagattggtggcatgatcaatttgctg
cagtctggcgtggcttcggcagaacgggtgtttactctgcttgatgaaaaggaacaatct
ccagatttccagccggctgcaaaacttggtcggccgggggagcccatccaaggtcgggtt
gtttttgaccacgtgaacttcaaatacaaagatgatgaaccacttattacggatctttcc
ttggttgcagaacctggccagaccgttgcgattgtgggaccaactggagctggcaagaca
acgttggtcaatttgctgatgcggttttacgacattgactccggcaagatttcgattgac
ggcgtggacgccgcgcagatgagccgcgacgacgttcggcaacggtttggcatggtactg
caggacgcttggttgttttccggcacgatccgggaaaacctggtttacggcaggctagat
gctagcgaagctgacatcgtcgaagcagctgaggcaacctatgttgatcactttgtgcga
gcccttccggacggttatgacacggtgctttcagacgacggcgattcgctgagtcaaggg
cagcgtcagttgatgactattgcccgagcctggttagcgaatccttcgattttgatcctt
gatgaggccaccagctccgtcgatactcgaaccgaagtgttgatccggaacgcgatgaat
aggttgcgcgaggatcggacaagttttgttattgcgcaccgattgtcaacgattcgggat
gccgatctgattttggtgatggatcacggtcgaatcatcgagcaaggtacgcacgaacag
ctcttggtagcaaagggattctacgagaagctctataaatcgggctatgaagcaccggcg
accgaggatgtccagacttga
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