Renibacterium salmoninarum: RSal33209_2302
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Entry
RSal33209_2302 CDS
T00641
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rsa
Renibacterium salmoninarum
Pathway
rsa03030
DNA replication
rsa03410
Base excision repair
rsa03420
Nucleotide excision repair
rsa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rsa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RSal33209_2302
03410 Base excision repair
RSal33209_2302
03420 Nucleotide excision repair
RSal33209_2302
03440 Homologous recombination
RSal33209_2302
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rsa03032
]
RSal33209_2302
03400 DNA repair and recombination proteins [BR:
rsa03400
]
RSal33209_2302
Enzymes [BR:
rsa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RSal33209_2302
DNA replication proteins [BR:
rsa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
RSal33209_2302
DNA repair and recombination proteins [BR:
rsa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
RSal33209_2302
NER (nucleotide excision repair)
GGR (global genome repair) factors
RSal33209_2302
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_5
DNA_pol_lambd_f
HHH
Motif
Other DBs
NCBI-ProteinID:
ABY24033
UniProt:
A9WT95
LinkDB
All DBs
Position
complement(2041497..2044235)
Genome browser
AA seq
912 aa
AA seq
DB search
MSESSAAASVSNTATKATPKLLVLDGHSMAFRAFYALPPETFVTDTGQHTNAVHGFTSML
LTMIRQQKPSHVAVAFDLDTPTFRSVEYTEYKAGRSKTPEEFYGQIDLIIKVMEAMNVPT
ISIDGFEADDIIATVASQSEAAGWQTLVVSGDRDAFQLITDNTFVLYPKKGISDIPPMDA
AAIEAKYFVRPDQYSDLAALVGETADNLPGVPGVGPKTAAKWINQYDGLAGILENIYAIG
GKVGDSLREHVDSVKRNRRLNHLLRDLDLPVTLEQMELQHPDREKIEELFDELQFNTLRK
RLFDLFGEDEAEASSEGHDAPEHGVLGSAAEISAWLEAAGTATIGLALSGQTLPLAEPVG
MDVHGIGLSSEESAAFIPLTGLDEAAEQVLASWLKGSAPKAVHDLKSALKALSGRGLDLD
GVVDDTSISAYLIQPERRNYDLADLSLYHLETPMTVSASKDAGQLDLGLEGDDGAQEAVL
RAFATQKLSSFFAPILLERNAEQLLTGLELPLARVLSGMELAGVAVSKETLDTLMADFGK
TIETAQTEAYAIIGHEVNLGSPKQLQTVLFDELGMPKTKKIKTGFSTDAEALADLTTKHP
HPFLLQLQAYRDATKLRQTVEGLIKSIGSDTRVHTTYAQNVAATGRLSSNNPNLQNIPIR
SEEGRRIRGAFVVGQKSTKSYETLLTADYSQIEMRIMAHLSGDEALIQAFKDGEDLHRFV
GSHIFNVEPQEVTSAMRSKVKAMSYGLVYGLSSFGLSKQLNISVDEARTLMKDYFDRFGA
VRDYLRGVVEQARLDGFTETIESRRRYLPELTSDNRQLREMSERAALNAPIQGSAADIIK
RAMLGVDAGIAEAGLESRMLLQVHDELVFEVAEGELDQVQALVIAQMAVAANLTVPLDVQ
VGIGKSWFDAGH
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgaatctagcgcagcagcttctgtcagcaacacggcgaccaaggccacaccaaaa
cttctggttttggacgggcattcgatggcgttccgcgctttttatgcgctgccaccggaa
actttcgtcaccgacaccggtcagcacaccaacgccgtgcatggattcacctcaatgctg
ctgaccatgatccgtcagcaaaagcctagccacgtggcggtggcctttgatcttgataca
ccaacctttcgatcggtggaatacaccgaatacaaggcaggtcgttcgaagaccccggaa
gagttctatggccagatagatctgatcatcaaggtcatggaagccatgaacgttcccact
atcagcattgatggctttgaggcggacgacattatcgctaccgtggctagccagtcggaa
gccgctggttggcaaacgttggtcgtctctggtgaccgggatgcctttcaactgatcacg
gataacacctttgtgctctacccgaaaaagggcatctcggatattccgccgatggatgcc
gcggcaatcgaagcgaaatattttgttcggccggatcaatactcggatttagccgcctta
gttggtgaaacagcagataacctcccgggcgtgcctggcgttgggccaaagactgcggcc
aaatggatcaatcagtacgacggcttggccggaattctggaaaatatttacgccattggc
ggaaaagttggcgattcgctccgcgagcatgttgacagcgtcaagcgcaatcgccgtttg
aaccatttgctgcgcgatcttgacttaccggtgacccttgagcagatggaattgcaacac
cctgatcgggaaaaaatcgaagagctctttgatgagctacagttcaatactttgcgcaaa
cgacttttcgacttatttggcgaagacgaggctgaagcatctagcgaaggtcatgatgcg
ccggaacatggtgtgctcggttcggcggcggaaatctcggcttggttagaggctgctgga
acggcaacaatcgggctggcgctatccggtcagacgttaccactggcggaaccagttggc
atggacgtgcacggaatcggcctgagttcagaagagtcggccgccttcataccgctgaca
ggtctagacgaggcagcggagcaagtcctggcgagctggctaaaaggttcggcgccaaag
gctgtgcacgatctcaaatcggctttgaaagcgctctctggacgcgggctggatcttgac
ggcgtcgtagatgacacgtcaatttcggcatatctgattcagccagaacgccgaaactat
gatttggcagatctgagtctttaccatttagagactccaatgactgtgagtgctagcaaa
gacgctggccaactggatttgggccttgaaggcgacgacggtgctcaagaagcagtactg
agggcttttgcgacccaaaagttgagcagctttttcgcgccaattctgctcgagcgaaat
gcggagcagctactgaccggtttggaactgcccttggctcgggtgctgtccggtatggag
ctcgccggagtcgccgtatctaaagaaaccttagataccttgatggctgatttcggtaaa
accatcgagacggctcaaaccgaggcgtacgcaattattggccatgaagtgaatttgggc
tcacccaaacaacttcaaaccgtgctcttcgacgagctaggtatgccgaagacgaaaaag
atcaaaactggattttctactgacgcagaggctttggccgatctcacgaccaagcatcca
catccatttttgctgcaattacaggcgtaccgtgatgcaactaaactccggcaaaccgtt
gaaggcctcatcaaatccattggctcagacactcgagtgcacactacctacgcgcaaaac
gtcgccgcgacaggtcgactgtcatcgaacaatccgaatttgcaaaatatcccgattcgc
agcgaagaaggccgtcgaatccggggtgctttcgtcgtaggccaaaaatcgactaagtcc
tacgagaccttgctgacagctgactactcgcagatcgaaatgcggatcatggcgcatctg
tccggtgacgaagcgctcattcaagcctttaaggatggtgaagatttgcaccgttttgtg
ggctcgcacattttcaatgttgagccgcaagaagtgacctcggcgatgcgatcgaaggtc
aaagctatgtcctatggtctggtctatggcttgagctctttcggtctttccaaacagctc
aacatttctgtcgatgaggctcgtaccttaatgaaggactacttcgaccgatttggcgcg
gtgcgagactacctgcgcggcgttgtagagcaggctcggttagacggttttaccgagacc
attgaaagccgccgtcgttacttgcctgagctcaccagtgacaatcgtcaacttcgggaa
atgtcagagcgagccgctttgaacgcgcctatccagggttcggcggcagatatcatcaag
cgcgccatgttgggtgtggacgctggcattgctgaagcagggctggaatctagaatgttg
ttgcaagtccacgatgaattggtttttgaagttgctgagggcgagctagatcaggttcag
gcgttggttatcgcgcaaatggccgtcgccgccaaccttacggtcccactcgatgtgcaa
gtgggaatcggaaagagctggttcgacgccggacactaa
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