Renibacterium salmoninarum: RSal33209_2383
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Entry
RSal33209_2383 CDS
T00641
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
rsa
Renibacterium salmoninarum
Brite
KEGG Orthology (KO) [BR:
rsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rsa03016
]
RSal33209_2383
Enzymes [BR:
rsa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
RSal33209_2383
Transfer RNA biogenesis [BR:
rsa03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
RSal33209_2383
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
ABY24109
UniProt:
A9WRA0
LinkDB
All DBs
Position
2108312..2109754
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AA seq
480 aa
AA seq
DB search
MSLPNDGTESNEKLTRSRSGRVSRPASKAGNAGKDENLVAPSPEGAGPELAGPELADGTA
LDLSAIPEIIELNAPRDGVPLIINTAEGLERAARALANGSGPAGVDAERASGFRYGQRAF
LVQIRREGAGTWLIDPEPFDDLKIIDDALNGVEWILHAASQDLPCLSELGMWPSALFDTE
LAARIAGLPKVGLAAVVEQLLGFGLAKEHSAADWSTRPLPEPWLRYAALDVEVLAELREE
LIELLEADGKLEWATQEFQAILAAGPPPPRIDPWRRTSGVHQLRDRKQLAAVRQLWLERD
ALAQNRDVAPGRLLPDSALVAAARAMPDTVPQLLGTPGFHGRAAQREAPRWLRSIAEAKA
SKELPPLHLPSSSPPPPRAWADKDPAAAARFATVRPRLFELAEQLNLPVENLLTPDFVRR
ISWRPPAEISAESLGSALADLGARPWQIELNTPGLLEAFIHPDPLPTKETAAKEATAHND
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgccgaacgatggaaccgaatccaacgaaaaacttacccggagtcgatctggc
cgggtcagccgccccgccagcaaagccggaaatgctggtaaagatgagaacctcgtggca
cctagccctgagggcgccggtcccgaattagccggtcccgaattagccgatgggacggca
ctagatctttcggcaatcccagagatcatcgaactcaatgctccgcgcgacggcgtgccg
ttgattatcaacacagccgagggattggaacgggccgctagggcgctagcaaatggcagt
ggtccagcaggcgtagatgccgaacgagcctccggctttcgctatggccaaagagcgttc
ctggtacagattcggcgcgaaggtgccggcacttggctgattgacccagagccatttgac
gatctcaaaatcattgacgacgcgctgaacggcgtcgagtggatcctgcatgcagctagc
caagatttaccgtgcctttctgagctaggtatgtggcccagtgcgctgttcgacactgag
ctagccgcccgaattgctgggctacccaaggttggcctagccgccgtcgtcgaacaactg
ctgggctttggcctggccaaagaacattccgccgctgattggtctactcgtccactgcca
gaaccttggctgcggtatgcagcgctagacgtcgaagtcctcgctgaattgcgcgaggag
ctcattgaacttcttgaggccgacggcaaactagagtgggcaacccaggaattccaagcg
attttggctgcaggaccaccaccgccaagaattgatccttggcggcgcacttccggggtg
caccagcttcgagatcgaaagcaattggctgcggttcggcagctctggttagagcgtgac
gcgctggcgcagaatcgtgatgtggcccccgggcgtttattaccagattccgcactcgtc
gccgcagcgcgcgccatgccagatactgttccgcagctattgggcactcccggttttcac
ggtcgcgcagcccaacgagaagcaccgcgctggctgcgctccatcgcggaagctaaggcc
agtaaagagctgcctccgctacatctacccagcagttcgccgccgccaccacgcgcttgg
gcggataaagaccctgcggcagcggctcgattcgccacggttcgtccccgcctatttgag
ttggctgagcagttgaacctgccggtggagaatttactgacgcctgattttgttcgacgc
atttcatggcgaccgcccgcggagatttccgcagaatcgcttggttcagcgcttgctgat
ctgggtgctcgcccgtggcaaattgagctgaacactccgggacttctcgaggcgttcatc
catccggatccgctgccgactaaagagacagcggcaaaagaggccacagcgcacaacgac
tag
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