Renibacterium salmoninarum: RSal33209_2481
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Entry
RSal33209_2481 CDS
T00641
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
rsa
Renibacterium salmoninarum
Pathway
rsa03030
DNA replication
rsa03430
Mismatch repair
rsa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rsa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RSal33209_2481
03430 Mismatch repair
RSal33209_2481
03440 Homologous recombination
RSal33209_2481
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rsa03032
]
RSal33209_2481
03400 DNA repair and recombination proteins [BR:
rsa03400
]
RSal33209_2481
Enzymes [BR:
rsa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RSal33209_2481
DNA replication proteins [BR:
rsa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RSal33209_2481
DNA repair and recombination proteins [BR:
rsa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RSal33209_2481
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ABY24207
UniProt:
A9WS78
LinkDB
All DBs
Position
complement(2210106..2213636)
Genome browser
AA seq
1176 aa
AA seq
DB search
MTGTESSFVHLHNHTEYSMLDGAARLTDLFEHTAELGMNSLATTDHGFVFGAFDFWSKAK
NAGIKPIIGVEAYLTPGTAHNDRTRVKWGDGSGKDVAGAGAYTHMTLWSETTQGMHNLFR
MSSLASLEGYLYKPRMDRDLLQTYGKGLIASTGCPSGEVPTKLGLGLYKEAVQAASDFQD
IFGKGNFYCELMDHGLDIERNVKADLLKLAKELNLPLVATNDLHYTHAEDASAHAALLCV
QSGSTLADPKRFKFDADEFYLKSPLEMRELFRDFPDACDNTLLIAERCEVAFDTGASYMP
RFPVPEGENEQSWFVKEVEKGLHYRYPGGIPADVRKQAEFEVGVITQMGFPGYFLVVADF
INWAKNNGIRVGPGRGSGAGSMVAYAMRITDLDPLKHGLIFERFLNPERVSMPDFDVDFD
DRRRGEVIRYVTEKYGDERVAMIVTYGTIKAKQALKDSSRVLGYPYSTGERLTKAMPPDV
MGKGMALTDVHNKEAKRYSEAEELRELIKTDPDSQKVFDTAIGIEGLKRQWGVHAAGVIM
SSDPLIDIIPIMRREQDGQIITQFDYPTCEGLGLIKMDFLGLRNLTIISDAIENIKLNRD
FDLDLEGLELDDVPSYELLARGDTLGVFQLDGGPMRSLLKLMKPDNFEDISAVLALYRPG
PMGVNSHTNYALRKNKLQEITPIHPELEAPLEDILGTTYGLIVYQEQVMAAAQKLAGFSL
GQADILRRAMGKKKKSELDKQQADFFAGMKTNGYSQAAMDALWKVLESFADYAFNKAHTA
AYGLISYWTAYLKEHYAAEYMAALLTSVGDDKDKLAIYLNECRRMGITVLPPDVNESSVN
FTPVDTDIRFGMGAIRNVGANVVQAMVGAREEKGAFENFSDYLLKVPAVVCNKRTIESLI
KAGAFDSLGHPRRALVAVHEEAIDSVVVLKRNEAVGQFDLFAGFSDEEAEPGFSTDVPDL
PEWEKKDKLAFERDMLGLYVSDHPLRGLEGVLSQHAEHTISYLIGEDGLSDGAIVTIAGM
ITSLSRRIAKASGNAYARAEIEDLGASMEVMFFGQVYGPISTILAEDLIVTIKGRLQKRD
DGSITLNAMELTVPDITEGDGGPVVILLQEHKATESVITSLGDVLGTHPGNSEVRLHLAG
SSSVKVMKLPLHRRVNPNPALFGDLKVLLGPTCLEA
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
gtgaccggcactgaatcttctttcgtacatcttcacaatcacaccgagtactcgatgctt
gacggcgcggccaggctgactgacctttttgaacacacagccgaattaggcatgaactcg
cttgcgacgacggaccatggctttgtttttggtgctttcgacttctggtctaaggccaaa
aacgcaggcatcaagccgattatcggcgtcgaagcttatttgacccctggtacggctcac
aacgaccgcaccagggtgaaatggggcgacggttccggcaaggacgtcgccggcgctggt
gcgtatacgcacatgacgctgtggtcggagacgacgcaggggatgcataacctgttccgg
atgtcttccttggcctcgctcgaaggttatctgtacaaaccacgtatggatcgtgatttg
ttgcagacttatggaaaaggcctgatcgcttccaccggctgcccttccggtgaggtgcca
actaagttgggcttgggtctctacaaagaagctgtgcaagcggctagcgatttccaagat
atttttggaaagggcaatttttattgtgagctgatggatcacgggctggacattgagcgc
aacgtcaaagccgatctactgaagctcgccaaagaactgaacttgccgctggtggccacc
aacgacttgcactacacacacgccgaagatgcgtccgcacacgctgctttgctctgcgtg
caatctggctcaactttggcggatccgaagcgttttaaattcgacgccgatgaattctac
ttgaagtcgccccttgagatgcgcgaactcttcagggatttccctgacgcttgcgacaac
actttactgatcgcggagcgctgcgaagtagctttcgataccggtgccagctacatgcca
aggttcccggtgccggaaggcgaaaacgagcaatcttggttcgtcaaagaagtcgaaaaa
ggtttgcactatcgctacccgggcggaattccggcagacgtgcgcaagcaggcggagttc
gaagttggcgttatcactcagatgggtttccccggctacttcctggtggtggccgacttc
atcaactgggcgaagaacaacggaatccgcgttgggccgggccgtggttctggtgcgggc
tccatggttgcttatgcgatgcgaatcactgatttggatccgctgaaacacggcctgatc
ttcgaacggttcctcaacccggaacgcgtttcaatgcccgactttgacgttgacttcgat
gatcgtcgccgcggcgaggttattaggtatgtgaccgaaaaatatggtgacgaacgcgtc
gcgatgattgtcacctatggcactatcaaggcgaaacaggcgctgaaagactcttcgcgg
gtgttgggctacccatactccacgggcgagcgcctgaccaaggctatgccgccggatgtc
atgggcaaaggtatggcgctgaccgacgtacataacaaggaagctaagcgctattcagag
gccgaagagctccgtgagttgatcaaaaccgatccggattcgcagaaagtctttgatacc
gcgattggcattgaaggcctcaagcgtcaatggggcgtgcacgctgccggcgtgattatg
tcctcagatccgctgatcgacatcatcccgattatgcgccgtgagcaagacggccagatc
atcacccagttcgattaccccacgtgtgaaggcctaggcctgatcaagatggacttcttg
ggtctgcgtaacctcacgatcatttcggatgccattgagaacatcaaactcaatcgcgac
ttcgaccttgatttagagggcctggaacttgacgatgtgccgtcttatgagctgcttgct
cgcggtgacacactgggtgtcttccagcttgacggcgggccgatgcgttcgttgctcaag
ttgatgaagccagataatttcgaagatatctccgcggttctggcactgtatcgtccgggt
ccgatgggtgttaattcacacactaactacgcgctacgcaagaataagcttcaagaaatc
actccgattcatccggagcttgaggctccgctcgaagacattctgggcacaacttacggc
cttattgtctaccaagagcaggtgatggcggcggcgcagaagttggctggcttctcactt
ggtcaagcggatatcttgcgtcgcgctatgggtaagaagaagaaatctgagcttgataaa
cagcaagctgacttcttcgcgggcatgaaaaccaacggctattcgcaggccgcaatggat
gcgttgtggaaggtgcttgaatccttcgccgattatgccttcaacaaagcccatacggcc
gcctatgggttgatttcctactggacggcttacctcaaggagcattacgcagccgaatac
atggctgcgctgcttacttccgtcggtgatgataaagacaaacttgcgatctacctcaat
gagtgtcgtcggatgggcatcacggtactaccgccggatgtcaatgaatcatcagttaac
ttcaccccggtagataccgatatccgcttcggcatgggcgcaatccgcaacgttggcgca
aacgtggtgcaagccatggtcggtgctcgcgaagaaaagggcgccttcgaaaactttagt
gattacctactcaaggtgcccgccgtcgtctgtaataagcgcaccattgagtcgctcatc
aaggctggcgcatttgattcgctaggccacccaagacgcgcgttggtcgctgtgcacgaa
gaagctatcgattccgtcgtggtgctcaaacgaaatgaagcagtgggtcagtttgacctt
tttgccggattcagcgacgaagaagccgagccgggattctccacagacgtgcccgatttg
cccgagtgggagaagaaggacaagctggccttcgagcgagacatgctggggctttacgtc
tccgatcacccgttgcgcggtttggaaggcgtgctgagccagcatgccgaacacaccatc
agttatctgatcggtgaagatggcctgtccgacggcgcgatcgtcaccattgcgggcatg
attacttcactttcgcgtcgaatcgccaaagccagcggtaacgcttatgcccgggcggag
atcgaagatttgggcgcgtcaatggaagtgatgttctttggtcaggtttacggaccaatc
tcgacgattcttgccgaggatctgatcgtgacgattaaaggccgcctgcagaagcgagat
gatggttcgatcacgctcaacgcgatggaactcaccgtgccagatatcactgagggcgac
ggcggtccagtggtgatcctgctccaagaacacaaggcgaccgaaagcgtgatcacctcg
ctgggcgatgttttaggcacacacccgggcaactctgaggtgcggctgcatctggccgga
tcgtcgtccgtcaaggtcatgaaactgccgctacaccggcgcgtgaatcccaacccagcg
ctcttcggtgacttgaaagtcttactcggccccacttgtttggaggcatga
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