Renibacterium salmoninarum: RSal33209_2801
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Entry
RSal33209_2801 CDS
T00641
Symbol
nocE
Name
(GenBank) NocE, putative
Organism
rsa
Renibacterium salmoninarum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
SLT
Phage_lysozyme2
Motif
Other DBs
NCBI-ProteinID:
ABY24526
UniProt:
A9WTK5
LinkDB
All DBs
Position
complement(2500590..2505533)
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AA seq
1647 aa
AA seq
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MGNELISLPHSSTDHKPVLPTKLAGVAGAAFNLRPNRAGMIDFLTTTPDNAKTSLFRWNG
KTVEALGQGETATVGLFGGRNGKNVVSGVDANAPGVKTVNPAQQGQSMASSSLDGDAIVF
PLPTDHLDKPSSTTAATVPQATRMVSTATGKYVDQKYDQTATKVFTEASAEIPAGVADDG
NNAERNTIAPKGSKLFAPDAQKLSTDAAPEQKSSQSLANDAPICSVARLDPAMQVMQPSN
SQVTWAAQMAEQGLLTGSAYARPQNFENMGLVPYSPSDDFPPISLDHPAGTTDLVPRSVM
LGILAQESNFNQASWHALPSVPADPLIANYYGVAGSIDQIDYPNADCGYGLAQVTTGMRA
GDGSFSHHGQMKIAADYQENIAAGLEILQSTWNQLYESGIIANNGDPSKLENWYFALWAY
NSGIQPTAAYGNTTGCTPSATCTGTDGTWGLGWSNNPRNPAYPPNRKPFLQSTYADAAHP
GDWPYQERVLGWMASPIIRYGYFGYGTPDYHGSSWVKIPSVNAMCDDSNHCNPNDASGSY
CSLSDYECWWHKPVTWVSDCATSCATSAYDYGAGTTEPSHADPHPPTCSLGPTVPSGPGG
APIIVDDEPSPPLHIAGCGQINWSSNGNFTMDYGKKAQGVTVGQIDMHQLGVGFGGRILF
THTESASDTAVIDKGTWTPNLPSLQYYKIKLHLPEAGATATDVVYTINPGGGVAPWKIRV
NQDWGSEQWATIGTFAMQNGGSISLDNASNMDGGIFDVAYDAVAFIPMGGSPGTPIGGPQ
GIQDAPKGSNPAFVNCGCVQRTAGDPVRTQTGYFGESITDLSTPGNGMALNLSRSYASAV
ADPNGPNKTLAQNGPFGWGWSYSYGLSATTAANGDVVIHQEDGSQVAFKLSGSTYTTAAP
RFDATLSKSGSTYSYARRGTSFFTFDASTGRFSQETDLAGTKASPAYWTKLSYDSAGLLN
QVTDPAGRSYTFGWAAGHITSVKDPANREVDYGYDASGNLTDVYGVGTSRSDDDHAVFGY
SAADLITSMTKPANFGKSATPAPVTSMVYDGQERVTSQTDAIGQVTKFVYGPDSANNLVA
GQTLVTDPAGHKTLDSYDANGLLTSETKGWSTADAGTWTYTYDPISLGISTSRDPDGHTQ
TFAYDDHGNKVSSSDPAGNTTPMAYDDAGHNVLSVSPSGLRSATTYTAAGMPSQVSLSDT
ALGTDVGNSTGTVGNPDVRVTKFDYADAAHPSERTSTTDALGKSSTSGYDNFGDVVSNTD
PLGNKTLFRYDTLTGRRTSMVTPEGFAAGVAAGCSPPAKGCTSFGFNAWGLQTSVIDALG
HKSSAVFDANGRKVSDTDANSHTTTTTFDPIGQATSVTMADGSNTSTSYTASGKVLEQVD
GLGKHTKYGYDGQHRAITLTDADGHMTSTAYDPAGLKKPSTDPRNVVATFGYDSAGRMAS
LKYSDGTAGVSAVSYDLDGRQTGLTDGTGASVWSYDVFGELLSHRNGAGARVLYGYDADW
HESSIAYPGQQTPVQQGYDDAGRLQSITDFSGNKITVGYNHNSQVTSLGYPNGTAVNSVF
DDADQLSSSALVKGSITLASLSYARDNANQLTGQTPTGLPGAAEKYSYNSVNEVTSETSG
PTSLSYGYDAAHNATTVRNGTQAFSAS
NT seq
4944 nt
NT seq
+upstream
nt +downstream
nt
atgggcaacgagctcatctcgctgccacacagctcaaccgatcacaaaccggtgcttcca
actaaactcgcaggtgttgcgggagccgccttcaacctgcgccccaatcgagccggcatg
atagatttcctcactacgacgccggacaatgccaagacctccttgtttcgttggaatggc
aagactgtcgaagcgcttggccagggcgaaaccgcgacagttggattgttcggcggacgt
aatggcaaaaacgtagttagtggcgtcgacgccaatgcgcctggcgtcaaaacggtcaac
cctgcacagcaagggcaatcaatggcatcgtcatcgttggatggcgatgccattgttttt
cctctgccaacggatcacctggacaagccttcttcgacaaccgcggcaactgttccgcaa
gctacccgcatggtgtccaccgccaccggtaagtacgtagatcaaaaatatgaccagact
gcgactaaggtcttcaccgaagcatcggccgagatcccggcaggcgtggctgacgacggt
aataatgccgaacgaaacacgattgcaccaaaggggagtaaattattcgctccagatgcc
caaaagctatcgacggatgcagcgccagagcagaaatcttcacaatccttagcgaatgac
gccccaatctgttcggtagccaggctcgatccagcaatgcaggtgatgcagccatcaaat
tctcaggtcacctgggctgcgcaaatggccgagcaagggctgctcactggctctgcctac
gcgaggccgcagaatttcgagaatatgggcttagtgccgtactcaccgagtgatgacttt
ccgccgatctcacttgaccacccggctggaacaaccgatctagttcccagatcagtaatg
ctgggcattctagctcaagaatccaacttcaaccaggcgtcctggcatgcgctgcctagc
gttcctgctgatccgctgatcgccaactattacggcgtcgctggttccattgatcagatc
gattacccgaacgcggattgtggctacggcctggcgcaggtcaccaccggcatgcgcgcc
ggcgatggttcgttctcgcatcacggccagatgaaaatcgcggcggattaccaggagaac
attgccgccggtctggaaattctgcaatccacctggaaccaactctacgaatccggaatc
atcgccaacaacggtgatccgtcaaagttggagaactggtattttgccttgtgggcttac
aactcgggcatccagccgacagctgcctacggcaacaccacaggttgtacgccgagcgct
acttgtactgggaccgatggcacctgggggttgggctggagcaacaacccgcgcaatccg
gcctatccgccgaaccgtaaacctttcctgcaaagtacttacgctgacgcggcgcacccg
ggcgactggccgtatcaggagcgggtattgggctggatggctagcccgatcatccgctat
ggctattttggctatggcaccccggattatcacgggagttcctgggtcaagatcccaagt
gttaacgcaatgtgtgatgacagtaatcactgcaatcccaacgacgccagcggttcatac
tgttcgctgtcggactatgagtgctggtggcacaagccggtcacctgggtaagcgattgt
gcgacgtcgtgcgcgacctctgcttatgactatggcgctgggacgaccgagccaagtcac
gccgatccgcatccgcctacttgttcattgggcccgacagttcccagcgggccgggcggc
gcgccgatcattgttgatgatgaaccttcaccaccgttacatattgctggctgcggtcag
atcaactggtccagcaatggtaatttcacgatggattacggtaagaaagcgcaaggcgtc
acggtggggcagatcgatatgcatcaactaggcgttggattcggtggccgaattctgttt
acgcacaccgaatcggcgtcggatactgcggtgatcgataaaggtacctggacaccgaac
ttgccaagtttgcagtattacaagatcaagctgcacctaccggaagcaggggcaaccgca
accgacgtggtctacaccattaatcctggcggtggtgtggcgccctggaagatcagagtg
aatcaggattggggctcggaacagtgggcgactatcggcactttcgcgatgcaaaatggc
ggcagtatcagcctggacaatgccagcaatatggacggcggaatcttcgacgtcgcctat
gacgctgtggcttttatcccgatgggtggctcaccgggaacgccaattggcggcccgcaa
ggaattcaggacgcgccaaagggatcaaatcctgcattcgttaactgtggttgtgtgcaa
cgtaccgctggtgacccagtgcgtacgcagaccggctactttggtgaaagcatcactgac
ttgagcacccctgggaatggaatggcgctgaacttgagccgttcctatgcttcggccgtg
gctgatccgaatgggccgaataagacgctcgcgcagaacggaccgtttggttggggctgg
agttattcatacgggctttccgcgacgactgcggcgaacggcgacgtcgtcattcatcaa
gaagacggttcgcaggtggcattcaagctttctggttccacgtacacgaccgctgcgccg
cgctttgacgccacacttagcaagagcgggtccacttatagctatgcgcgccgcggaacc
tcgttctttacttttgacgccagcacgggccgatttagccaagagacagatcttgctggc
actaaggcaagtcccgcttattggacgaaactgagctatgactcggccgggctgttgaat
caagtgactgatccggctggacgcagctacaccttcggctgggctgctggtcacataacc
agtgtgaaagatccggctaatcgcgaggtggattacggctacgacgcgagtggcaacctc
actgatgtttacggggtcggtacgtcgcgaagcgacgatgaccacgcagttttcggttat
tcggctgcagacctgatcacctcaatgacgaagccggccaacttcggcaagagcgccacc
ccggctccggtgacgtcgatggtgtacgacgggcaagaacgagtgacaagccaaactgat
gccattggccaggtaacaaagtttgtctacggtccggattcggcaaataatctggtggcc
ggtcagaccttggtcactgacccggcggggcataagactctagacagctacgacgccaat
ggcttgctcaccagcgagactaaaggttggtcgacggcggacgctggtacgtggacgtac
acctatgatccgatttccctgggtatttcaactagccgggatcctgacggccatactcag
acgtttgcttatgacgatcacggcaataaggtctccagctcagacccggccggaaatacc
accccgatggcttatgacgacgccgggcacaatgtgctgagcgtttcaccctctggtctg
cgttcagcgaccacgtacaccgccgccggcatgccttcgcaggtctcgctgagcgataca
gcgttggggaccgacgtcggaaattccaccggcacggtcggcaatccggatgtgcgggtg
actaaattcgactatgccgatgctgctcaccccagcgaacgtacttcgaccactgacgcg
ctggggaagtcttcgacgtcgggctatgacaactttggtgatgtggtgagtaataccgat
ccattggggaacaagaccttgttccgctacgacacccttacggggcgtcgcacctcgatg
gtgacgccggaaggtttcgctgctggagttgccgctggttgttcgccgccagcaaagggt
tgcaccagcttcggtttcaacgcgtggggtttacagaccagcgtcattgatgcgctggga
cataagtcgagcgctgtcttcgatgccaacggtcgaaaagtgtctgacactgatgccaat
tcgcacactacgacgactactttcgatccgattggtcaggcaacatcggtcacaatggcc
gatggcagtaacaccagcaccagttacacagcatccggcaaggtcttggaacaggttgat
ggtttaggcaagcacacgaaatatggctatgacgggcagcatcgggcaataactttgacc
gatgctgatggccatatgacttcgactgcttacgatcccgctgggctcaagaagccgagt
accgatccccgaaatgttgtagccacctttggctatgactccgcaggtcggatggcttcg
ctgaaatattcggatggcacagcaggcgttagcgcagtgagctatgacttggacgggcgg
caaactggccttaccgacggcaccggggcaagcgtctggtcctatgacgtttttggcgag
ttgctttcgcaccgaaatggtgccggagcgcgagttctctatggctatgacgcggattgg
cacgagtcgagcatcgcgtacccggggcagcaaaccccggttcagcagggctacgacgat
gccgggcggttgcagtcaatcactgacttttctggcaacaagattacggttggctacaac
cacaacagtcaggtgacctcgctgggatatcccaacggaaccgcggtgaatagtgtcttt
gatgatgcggatcagttgagcagttctgcgttggtcaaaggatcgataacgctggcgtcc
ctttcgtacgccagagataacgcgaatcaactaaccgggcaaacgccaacgggcttgccg
ggcgccgcggagaaatacagttataactcggtgaacgaagtgacttcggaaacttccgga
cccacgtcgttgtcctatggctacgatgcggcgcacaatgccacgacggtgcggaatggt
actcaagcatttagtgcttcttga
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integrated database retrieval system
