Rhipicephalus sanguineus (brown dog tick): 119372113
Help
Entry
119372113 CDS
T07382
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
rsan
Rhipicephalus sanguineus (brown dog tick)
Pathway
rsan03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
rsan00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119372113
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsan03021
]
119372113
03036 Chromosome and associated proteins [BR:
rsan03036
]
119372113
Transcription machinery [BR:
rsan03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
119372113
Coactivators
SAGA/TFTC/STAGA complex
119372113
Chromosome and associated proteins [BR:
rsan03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
119372113
STAGA complex
119372113
TFTC complex
119372113
SAGA complex
119372113
SLIK complex
119372113
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_IFT122_1st
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
TFIID_NTD2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_1st
Beta-prop_VPS8
NBCH_WD40
DSE1_N
WDR90_beta-prop_4th
CFAP251_N
Beta-prop_SCAP
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_WDR41
Beta-prop_DCAF4
Beta-prop_TEP1_C
Beta-prop_Aladin
Beta-prop_EIPR1
Beta-prop_RIG_2nd
PAC11
ASA1
TRM82_WD
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_HPS5
WD_LRWD1
Beta-prop_NOL10_N
UBact
Motif
Other DBs
NCBI-GeneID:
119372113
NCBI-ProteinID:
XP_037498502
LinkDB
All DBs
Position
10:71293003..71301277
Genome browser
AA seq
706 aa
AA seq
DB search
MAEPSADGAMVVVLNNGDAGAAPASAPATTTTTSTTNSLPNDKEDEDEENPFSGLDKSSL
LAVLKFLKKNKLQETELILRKEAKLLKDLQDDSATAPTTGSDVSSVLSTYKSEGDPDIYE
DSYTSFKRFVEGSLDSYRHELAMVLYPAFVHMYLELVYNEHERQAVKFMERFGPEQEEYY
QEDVKRLGCLTKKEHMKGNEFMDNFRSGQFTVRMSRDTYNFLKRYLQDKKNSVLQNIVQE
HLYLDVYEGIARAKAQLDATAGAFLGEAARQANKVKVYYGLLKEPELTIPLDEDEEGGDG
EGGDKPKKKKPKKDTLLSKKARNDPNAPPNSRIPLPELRDADKMDKVSAMKEALKRVRLG
PDSLPSICFYTFLNSYRGVTVAEVSEDSTLLAAGFGDSSIRVWTLTPHKLRCMRSAHELE
TIDKDAEDVLYRMMDDRSGVDVRVLMGHSGPVTAVSFSPDHTYLLSSSEDATIRLWSLLT
WTNVVCYRGHCFPVWDVRFSPHGFYFASCGHDRTARLWSTDSYQPLRVFTGHVSDVDCIQ
FHHNSNYIATGSSDRTVRLWDVLSGGCVRYMTGHKGRIYCLQFSNDGRFLASAGADCKIL
MWDIAHGHLLAELSGHTDTIYCLCFSRDTAILASGGIDNCIKLWDFARLIDEIDLEDLNI
SHAPTVRTNCDGLLLGSYPTKATSILALHFTRRNLLLAAGMYQSGS
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggcggagccatcggccgacggtgcgatggtcgtcgtgctcaataacggcgatgcagga
gccgcaccggcttctgcacccgccacaacgacaactacgagcacgaccaactccctgccg
aacgacaaggaggacgaggatgaagagaatccgttcagcggcctcgacaagagctccctc
ctcgccgtgctcaagttcctcaagaagaacaagctccaggagacggagctgatcctccgc
aaggaggccaagctcctgaaagacctgcaggacgactcggcgacggctcctaccaccggc
tccgacgtcagcagcgtcctctcgacctacaagagcgagggtgatcccgacatctacgag
gacagttacaccagtttcaaacggttcgtggaaggctcgctcgattcgtatcgtcacgag
ctagccatggtgctgtacccggccttcgtgcacatgtacctggagctggtctacaacgag
cacgagcggcaggccgtcaagttcatggagcgcttcggtcccgagcaggaggagtactac
caggaggacgtcaagcggctcggctgcctcaccaagaaggagcacatgaaaggcaacgaa
ttcatggacaacttcaggtcgggtcagttcacggtgcgcatgtctcgcgacacgtacaac
ttcttgaagcgatacctgcaggacaagaagaactcggtgctgcagaacatcgtccaggag
cacctctacctggacgtctacgaagggatcgcgcgcgccaaggcgcagctagacgcgacg
gcgggcgccttcttgggagaggcggcgcgccaggcgaacaaggtcaaggtctactacgga
cttctgaaggagcccgagctgaccatccctctggatgaggacgaagaaggcggagacggt
gagggaggcgacaagcccaagaagaagaagcccaagaaggacacgctgctctccaagaag
gcgcgaaacgaccccaacgcgccgcccaacagccggatcccgcttcccgagcttcgagac
gccgacaagatggacaaggtgagcgccatgaaggaggccctcaagcgggtacggctggga
cccgacagcctgccgtccatctgcttctacaccttcctcaactcgtaccgtggcgtcacc
gtggccgaggtctccgaggacagcaccctactggccgcgggcttcggagactcctccatc
cgggtgtggaccctgaccccgcacaagctcaggtgcatgaggtcggctcacgagctcgag
accatcgacaaggacgccgaggacgtcctctaccggatgatggacgaccgcagcggagtc
gacgtgcgtgtcctgatgggccacagcggtcccgtgacggcggtgagcttcagcccggac
cacacgtacctgttgtcctcgtcggaggacgccaccatccgcttgtggagcctgctgaca
tggaccaacgtggtctgctaccgaggccactgcttccccgtctgggacgtgcggttcagc
cctcacggcttctatttcgcctcgtgcggccacgaccggacggcccggctctggtccaca
gactcctaccagccgctacgggtgttcacagggcacgtgtccgacgtggactgcatccag
ttccaccacaacagcaactacattgccacgggctcgagcgaccggacggtcagactgtgg
gacgtcctgtccggcggttgcgtgcgctacatgacgggccacaaggggcgcatctactgc
ctccagttcagcaacgacggccgtttcctcgcctccgccggcgccgactgcaagatcctc
atgtgggacatcgcacacggccacctgctcgccgagctgtccggccacacggacaccatc
tactgcctttgcttcagccgcgacacggcgatcctcgcctcgggcggcatcgacaactgc
atcaagctgtgggactttgcgcggctcatagacgagatagatctcgaagatctcaacatc
tcccacgcgccaacggtgcggacaaactgtgacggcctcctgttgggctcgtatccgacc
aaggcgacatccatcttggcgctgcacttcacgaggagaaacctgttgctcgcggctggc
atgtaccagagtggatcctga
DBGET
integrated database retrieval system
