Rhipicephalus sanguineus (brown dog tick): 119372113
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Entry
119372113 CDS
T07382
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
rsan
Rhipicephalus sanguineus (brown dog tick)
Pathway
rsan03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
rsan00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119372113
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsan03021
]
119372113
03036 Chromosome and associated proteins [BR:
rsan03036
]
119372113
Transcription machinery [BR:
rsan03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
119372113
Coactivators
SAGA/TFTC/STAGA complex
119372113
Chromosome and associated proteins [BR:
rsan03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
119372113
STAGA complex
119372113
TFTC complex
119372113
SAGA complex
119372113
SLIK complex
119372113
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_HPS5
WD_LRWD1
Beta-prop_Vps41
UBact
WD40_like
Motif
Other DBs
NCBI-GeneID:
119372113
NCBI-ProteinID:
XP_037498502
LinkDB
All DBs
Position
10:71293003..71301277
Genome browser
AA seq
706 aa
AA seq
DB search
MAEPSADGAMVVVLNNGDAGAAPASAPATTTTTSTTNSLPNDKEDEDEENPFSGLDKSSL
LAVLKFLKKNKLQETELILRKEAKLLKDLQDDSATAPTTGSDVSSVLSTYKSEGDPDIYE
DSYTSFKRFVEGSLDSYRHELAMVLYPAFVHMYLELVYNEHERQAVKFMERFGPEQEEYY
QEDVKRLGCLTKKEHMKGNEFMDNFRSGQFTVRMSRDTYNFLKRYLQDKKNSVLQNIVQE
HLYLDVYEGIARAKAQLDATAGAFLGEAARQANKVKVYYGLLKEPELTIPLDEDEEGGDG
EGGDKPKKKKPKKDTLLSKKARNDPNAPPNSRIPLPELRDADKMDKVSAMKEALKRVRLG
PDSLPSICFYTFLNSYRGVTVAEVSEDSTLLAAGFGDSSIRVWTLTPHKLRCMRSAHELE
TIDKDAEDVLYRMMDDRSGVDVRVLMGHSGPVTAVSFSPDHTYLLSSSEDATIRLWSLLT
WTNVVCYRGHCFPVWDVRFSPHGFYFASCGHDRTARLWSTDSYQPLRVFTGHVSDVDCIQ
FHHNSNYIATGSSDRTVRLWDVLSGGCVRYMTGHKGRIYCLQFSNDGRFLASAGADCKIL
MWDIAHGHLLAELSGHTDTIYCLCFSRDTAILASGGIDNCIKLWDFARLIDEIDLEDLNI
SHAPTVRTNCDGLLLGSYPTKATSILALHFTRRNLLLAAGMYQSGS
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggcggagccatcggccgacggtgcgatggtcgtcgtgctcaataacggcgatgcagga
gccgcaccggcttctgcacccgccacaacgacaactacgagcacgaccaactccctgccg
aacgacaaggaggacgaggatgaagagaatccgttcagcggcctcgacaagagctccctc
ctcgccgtgctcaagttcctcaagaagaacaagctccaggagacggagctgatcctccgc
aaggaggccaagctcctgaaagacctgcaggacgactcggcgacggctcctaccaccggc
tccgacgtcagcagcgtcctctcgacctacaagagcgagggtgatcccgacatctacgag
gacagttacaccagtttcaaacggttcgtggaaggctcgctcgattcgtatcgtcacgag
ctagccatggtgctgtacccggccttcgtgcacatgtacctggagctggtctacaacgag
cacgagcggcaggccgtcaagttcatggagcgcttcggtcccgagcaggaggagtactac
caggaggacgtcaagcggctcggctgcctcaccaagaaggagcacatgaaaggcaacgaa
ttcatggacaacttcaggtcgggtcagttcacggtgcgcatgtctcgcgacacgtacaac
ttcttgaagcgatacctgcaggacaagaagaactcggtgctgcagaacatcgtccaggag
cacctctacctggacgtctacgaagggatcgcgcgcgccaaggcgcagctagacgcgacg
gcgggcgccttcttgggagaggcggcgcgccaggcgaacaaggtcaaggtctactacgga
cttctgaaggagcccgagctgaccatccctctggatgaggacgaagaaggcggagacggt
gagggaggcgacaagcccaagaagaagaagcccaagaaggacacgctgctctccaagaag
gcgcgaaacgaccccaacgcgccgcccaacagccggatcccgcttcccgagcttcgagac
gccgacaagatggacaaggtgagcgccatgaaggaggccctcaagcgggtacggctggga
cccgacagcctgccgtccatctgcttctacaccttcctcaactcgtaccgtggcgtcacc
gtggccgaggtctccgaggacagcaccctactggccgcgggcttcggagactcctccatc
cgggtgtggaccctgaccccgcacaagctcaggtgcatgaggtcggctcacgagctcgag
accatcgacaaggacgccgaggacgtcctctaccggatgatggacgaccgcagcggagtc
gacgtgcgtgtcctgatgggccacagcggtcccgtgacggcggtgagcttcagcccggac
cacacgtacctgttgtcctcgtcggaggacgccaccatccgcttgtggagcctgctgaca
tggaccaacgtggtctgctaccgaggccactgcttccccgtctgggacgtgcggttcagc
cctcacggcttctatttcgcctcgtgcggccacgaccggacggcccggctctggtccaca
gactcctaccagccgctacgggtgttcacagggcacgtgtccgacgtggactgcatccag
ttccaccacaacagcaactacattgccacgggctcgagcgaccggacggtcagactgtgg
gacgtcctgtccggcggttgcgtgcgctacatgacgggccacaaggggcgcatctactgc
ctccagttcagcaacgacggccgtttcctcgcctccgccggcgccgactgcaagatcctc
atgtgggacatcgcacacggccacctgctcgccgagctgtccggccacacggacaccatc
tactgcctttgcttcagccgcgacacggcgatcctcgcctcgggcggcatcgacaactgc
atcaagctgtgggactttgcgcggctcatagacgagatagatctcgaagatctcaacatc
tcccacgcgccaacggtgcggacaaactgtgacggcctcctgttgggctcgtatccgacc
aaggcgacatccatcttggcgctgcacttcacgaggagaaacctgttgctcgcggctggc
atgtaccagagtggatcctga
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