Rhipicephalus sanguineus (brown dog tick): 119373898
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Entry
119373898 CDS
T07382
Name
(RefSeq) hypoxia-inducible factor 1-alpha
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
rsan
Rhipicephalus sanguineus (brown dog tick)
Pathway
rsan04137
Mitophagy - animal
rsan04140
Autophagy - animal
rsan04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
rsan00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119373898
04137 Mitophagy - animal
119373898
04148 Efferocytosis
119373898
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsan03000
]
119373898
Transcription factors [BR:
rsan03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
119373898
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_11
PAS_3
PAS
PAS_9
PAS_4
HIF-1
HIF-1a_CTAD
HLH
Motif
Other DBs
NCBI-GeneID:
119373898
NCBI-ProteinID:
XP_037499884
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Position
11:54787329..55000613
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AA seq
883 aa
AA seq
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MSAAKMASAPKERRKNSEKRKEKSRDAARCRRSKESEIFTELSQQLPLPESVACQLDKAS
VMRLAISYLRLREILEPITEVAKSAACSVYDSTVLEALDAVLLVLSAEGEIVFLSDNVGR
HLGLNQVDLMGQSVYEYCHPCDHDELKAALLPKPEDLHDLSPQPCHFLMRLRCTLGSKGR
GVSVKSASSYKIMQCVGTRVSREVAPKHCPEEDQPSPLPAAVVAKEEEETVAPAAVPHLP
ISIIIRERRHFLVCVAQPIPHPSNIEVPLGTHTFLSRHNPNMCFTHVDDRTETFLGYTSE
ELLGKSVYSYFDPRDVLHLQQDFKTLFAKGQCETGQYRFLAKHGGCVWVLTQATLIYENS
SCSKPQCVVCVNYVLSGASGKHEVLAEQQLTSTAVKPKEPEPKLQPLPTAPVAEAAAAAA
AEEDEDESESEDEDEEEQCFSSSTSKIFAPRTADMNKGFLIFADDDSGLTVLREESEPED
LTHLAPRAGDDTIPLEGLPSDVLGDAFSLSDIYGDENKLLPDYALLPPEEDCPLGRKDPF
LSYRDDSDPLSSPGSCGTPPSSDGEGRCSSCSDVPSIESPVDRFAGLELKPEGHTDLQDD
DFDMRAPYISMHGDDFPLLSPDSVMWGPQDSSPGSSSSRSSLCNSPTFFGTSSSPPRPTL
GSLGPNPKSSLAALLVAELPPPSSRSREWTKHRARTNHPRSTGVSGSHRQDLSRSARLTH
PHQQLHQSVTRGHLTRGLSAASDGRPHAYVTTALEQKMGMPSPPDPPPKRGSTERALGAG
QLASPKRMRIDLRGLQLQNKDSVLLNLLVNGEDACHGYLCQTLRYDKRCPPSSPRPAPLL
LDEPIPTLQDLSQLDAEVNAPIQQLLTGEDLLSALDQSVPALV
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctgccaaaatggcaagcgctcccaaggagcgacgcaaaaattcagaaaaacgt
aaagagaaatcacgggatgcggcccgatgtcggcgcagtaaagagtccgaaatcttcact
gagctgtcacagcagctgccgcttccggagagcgtggcctgccagctggacaaggcctcg
gtcatgcgtctggccatcagctacttgcggctgcgtgagatccttgagccgataactgaa
gtggccaaatcagcagcctgcagtgtctacgattcaacggttctggaggccctggatgct
gtcctgctagtgctgtcggccgagggagagatcgtcttcctctcggacaatgtgggacgt
caccttggtctaaatcaggtggacttgatgggtcagagtgtttacgagtactgtcatccc
tgtgaccatgatgaactgaaggctgccctgctgcccaaacccgaagacctacacgacctg
tctcctcagccttgccacttcctgatgcgcctgcgctgcacactgggtagcaagggccgc
ggtgtcagcgtcaagtcggcctcttcttacaagattatgcagtgtgtgggcacgcgcgtc
tcacgcgaggtggcccccaagcattgtcccgaagaagatcagccgtcgccgctgcccgca
gctgtggtggccaaggaagaggaggagactgtggcgcctgccgccgtgccccacctgccg
atcagcatcatcatccgcgagcggaggcacttcctggtgtgtgtggcccagcccatccct
cacccgtccaacattgaggtgcccctggggacacacacattcctcagtcggcacaacccc
aacatgtgcttcacgcacgtcgatgacagaacggagacattcctcggctacacatccgag
gaactgctcgggaagtccgtctactcctacttcgaccccagggacgtgctgcatttgcaa
caggacttcaaaacattgttcgccaagggccagtgcgagaccggccagtaccgcttcctg
gccaagcatggtggctgcgtatgggtgctgacccaggcgaccctcatctacgagaacagc
agctgcagcaagccacaatgcgtcgtctgcgtcaattacgtgctgagtggtgccagcggg
aagcatgaagtgctcgcagagcagcaactgacttcaacggcggtgaagccaaaggagccg
gagccgaagttgcagccactgccgactgcccctgtggctgaagcagcagcggcagcagca
gcagaggaggacgaggacgagtccgagtccgaagacgaagacgaggaggagcagtgcttc
agcagtagcacgagcaagatctttgctcctcgcacggcggacatgaacaagggcttcctc
atcttcgctgacgatgacagcggcctcacagtgctgagagaggaatctgaacctgaggac
ctgacccacttggcaccacgggctggcgacgacaccattccattggagggtctgccttct
gatgtgcttggcgacgcattctcactgtcggacatctatggcgacgagaacaagctgttg
ccggactacgcgctgcttcctcccgaggaggactgcccgctgggtcggaaggaccccttc
ctcagttaccgggacgacagtgaccctctgtcatcgccgggatcgtgcggcacgccgccg
tcttcagacggagaagggcgttgcagcagttgctcggacgttcccagcatcgaaagcccc
gtggaccggtttgccggcctcgagctaaagcccgaagggcatacagatctccaggacgat
gactttgacatgcgagcaccgtacatctccatgcacggagatgactttccgctgctcagt
cccgactcagtcatgtgggggccccaggactcgtctcccgggagctcgtccagtcggagc
tctctctgcaacagcccgacattcttcggcacctcgtcgtctcctccgaggccaacgtta
gggtccctgggacccaacccaaagtccagcctggctgccctcctggtagccgaactccca
ccaccttcatcgaggtcacgggagtggaccaagcaccgagcacgaacgaaccaccccagg
tcaacgggagtctctgggtcacatcggcaagacttgtcaaggtcagcacgattgacacat
ccacaccaacaactgcaccagtcggtgacgagaggccacctgacacggggtctgtcggcg
gcgagcgacgggcggccgcacgcatacgtgacgacggcgctggagcagaagatggggatg
ccgtcccccccggacccaccgccaaagcgcggctccacggaacgggccctgggggctggg
cagctggccagccccaagaggatgcggatagacctgcgaggcctgcagctccagaacaaa
gacagcgtgctgctgaacttgctggtaaatggagaagacgcctgccatggatacctgtgc
caaaccttgcgctatgacaaaaggtgcccgccgtcgtctccacgtcccgctcctctcctg
ctggacgagcctattccaacgttgcaggacctgagtcagctggatgccgaggtcaacgcc
ccgatccagcaactgctcactggcgaggacttgctcagtgccctcgaccagtcggtgcct
gcactcgtctga
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