Rhipicephalus sanguineus (brown dog tick): 119374170
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Entry
119374170 CDS
T07382
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
rsan
Rhipicephalus sanguineus (brown dog tick)
Brite
KEGG Orthology (KO) [BR:
rsan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rsan03036
]
119374170
Enzymes [BR:
rsan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
119374170
Chromosome and associated proteins [BR:
rsan03036
]
Eukaryotic type
Gene silencing
piRNA pathway
119374170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
DEAD
CS
Helicase_C
Motif
Other DBs
NCBI-GeneID:
119374170
NCBI-ProteinID:
XP_037500162
LinkDB
All DBs
Position
1:231002768..231180571
Genome browser
AA seq
2046 aa
AA seq
DB search
MDYTSGSMAIEAFRNAQGWKHRVNVIVLKVTSPTRFLIREAVGAEMSPSGREFVGMEAEM
NQHMTKWDVQPLTPLLPELGSIVLVRNPSVKGWYRARVNMIFDTMTGYQVEVFLVDYGET
LMVDRKALRKVPNKRILEVPFQCVEFSLLGLKPVRWTIDPATITMQYVEGSSWDTASIDY
VKSTVRKADVVHVEVLGETISGGLYGKIFINCNKNVMSLDEELIKLKYAFPDTEAGREEV
VLDDHKPDKDDQQSAKESQIEGISESESFWHDIQNKSASAALKDVLDSVYDTCSSSLARV
PVEVCEAEESPPLSRSASGESSPLQWSSSSTSLSIDASSSGTDTPPTLPGLGRGLAMMLK
LRELGSDSSCHRPGPRGSIDMQGQELCTAMLSPSEDSDEDESYTPTLVGTPPAVFRECET
DYSPDSPGSASSSEPAMPQLDTVQSRHEPSSEIPKPVMPQSLADTSQFGECKARGRARLL
SLSPNPSSSPFEKSHTTFPRSIDPSSFTKVHARDTLSERFSMPNEASSDSLAPKACAADV
KGQSSVVGLPDLTAYRYRGRGRAVLTQLASSRMPGQHTAPLSSQPLSLQQNSLAQEESFD
ISSGSNQPKPASTCAQNGDNCPSKVVTRASQMKDLLERKGRSLCAAPFQGCSSKVEDDSM
ANFPKPDATAETVRALKKDDLFTGSSLSSPGSSTDQIPSSTMSSREVFARLIDASNLNTS
YQPDEELVDPSATTDVSHSLEDFRRTDFKSFSELPPDLDPCAQFKGAVYFSTDYDTCRLP
SQPALSKVRALCHGIRPPRPVTHLDQTPFDESVKSRLCSKGFRGPTCIQSVVWPAVMSGR
DIVAVAPPHSGKTLAYLIPLVSRLMSETDYENLPAGVGPLMVVLTSTWKGARRLSEQAKL
LVHEKRGPKVCALYAGGAEKGKEAEIVNGCDILVATPHCFLRFLTNYDRLIVNLHRCCHL
VLDDGERLLDKFAVEVTSVMNEFRRCVERRQPGMLHGQIVVCSTMWSSGLNWFIRMTSLS
KTPLIMFTSFYEAAIYAQVPTVAFYGDPRSRQEVLLRIVEGSQGRKVVVCTADRKSAISL
HRLLLSSCVYCLLLHDELTMAKTWEITSEWNTERPKTIMPVLVAQDNMLPLANIHDAAVL
IHYDVPELSKYNFGFRFSVLADRMRSFKDEGAVSTPEEPVAHMILSSNNHSLSVQLVEFL
NRLGTNVPDGLARLAVEEQAKASSNPMVALCPNLKAFGHCERQTAEKRCSYRHEVLCGAD
HSRVWEDLPSQGQLLIVVTKVVNATRFYAWILQHWDTPPNSTNERKLEVKENLELQNAMM
FLNDFFSKPSNLKYVDTNAMPKVGEVYGLEYSVGHFHRVLVTSVMPKSSAPASITVSHMD
YGGQSTVAATRLLRLPPQLTKLRPFAVEVYCCRVQPQDRDLDWTFQAVYKAHELVFRKEL
LGKIVLRLGNTLWLDPLVLWESLPFVDAKVPLKNVRTTLIEERLACNNATHLESLCDLVA
DAGVPLPILSEKNKEGNGSDNPNVVVNQHCTTFLDMQDFNHVYLWKVTSPSDFYIQPLKF
NSCLDELEDNIQKAMKKRELTKRKFVHRGVVCIARYNNDRWYRGEVQEVLNSADVIVFFP
DYGDTARCPQDELFKPLSWMMLLPYQGVQCSLAGIDSPSGNWSPMAQSVLDDFGYDDNDV
NRLLCLRVVKKNAGERPGTNCYEVLLFSTCNEERISAADLLVEQGLAVSTKLPKLSFDVN
LPHSTVPLEGAGAYDTESDEDGEEVTLECQRKLEEHVYGVFSEVRDQILAPAAAELMQEL
SCESGALGQGDTSCQPQAKESEAPPPPQLGKQSDEKAAAKRVKPAKAHLRAFTKNCPPLL
ESQLKAEHSRQASISWWQDHSFVYVDILISNVKEYKLDVTAKMFCIRVKTAQHEYLAHER
LYAAIVPKKARLVVKADSLRITLEKIRAKHTWKFLTRNKRKVQYIHYELDHIDVSDDENE
IVRACKAFKDPLYTGYERPAQILPYDPVAHEERVREIEAGIEDIDDSEAHMYFSVDPNNI
FDDFTE
NT seq
6141 nt
NT seq
+upstream
nt +downstream
nt
atggattacacttcaggcagcatggccatagaagcgttcaggaacgctcaaggatggaag
cacagagtgaatgtcattgtcttgaaggtgacctcgcctactcgctttctgataagggaa
gcagtgggagcagagatgtctccaagtggaagagaatttgttggcatggaggcagaaatg
aaccagcacatgacaaaatgggatgttcaacccctcacaccactacttccagagcttgga
tctattgttttggtgcgaaatccttctgtgaaaggatggtatcgggcacgtgtcaatatg
atattcgacaccatgactggctaccaagttgaggtcttcttggtcgactatggagaaacg
ctcatggtggatcgaaaagcgttgcgcaaggtgccaaataaaaggattcttgaagtgcct
tttcaatgtgttgaattttcgctgcttggactgaagcctgtgcggtggacaatcgaccca
gcaaccattacaatgcagtatgtggaaggctcctcttgggatactgcttccattgattat
gtgaagtcaacagtgcgaaaagcagatgtggtgcacgttgaagtgctgggagagaccatc
tcaggaggcctttatggaaagatcttcattaactgcaacaaaaatgtcatgtccctagat
gaagagctgatcaagctgaagtacgctttcccagacactgaagcaggcagggaagaggtc
gttttggatgaccacaaacctgacaaagatgaccagcagtcagcaaaagaatcacaaatt
gaaggcatttctgaaagtgagagcttttggcatgacatccagaacaagagtgcttcagca
gctttgaaagatgtgcttgacagtgtctatgacacttgttcgagcagtttggcacgtgtt
cctgtcgaagtgtgcgaggcggaagaatcgccaccattgtccagatctgccagtggcgaa
agctctccactgcagtggtcatcgtcttcaacctccctttccattgatgcgtcttcatcg
ggcacagatacacctcccacattgcctggtcttggccgaggccttgccatgatgctaaag
ctcagagaacttgggagtgacagctcatgtcacaggcctggtcccaggggcagcatagac
atgcagggccaggagctatgcactgctatgctgagtccaagtgaggacagtgatgaggat
gaatcttatacccctactctagttggcactccacctgcagttttcagggagtgtgagaca
gactattctcctgacagcccaggctcagcgtcatcatcagaacctgcaatgccacagctt
gacactgttcaatcgaggcatgaaccatcctccgagattcctaaaccagttatgccacaa
tctttggctgatactagccagtttggggaatgtaaagcccgtggtcgagctcgtctgctc
agtttgtctcccaatccatcaagttcaccgtttgaaaaaagtcatacaacatttccaaga
agcattgatccaagttcctttaccaaggtgcatgcaagagacacgctcagtgaaagattt
tcaatgcccaatgaagcatctagcgactcattggctcctaaagcctgtgcagctgacgta
aaaggccaaagctctgttgtaggcttacctgacttaacagcataccgttacagagggcgc
ggtcgtgcggtattgacacaactggcctcaagccgcatgccaggtcagcacactgctcca
ttgtcatcgcagccactaagcttgcaacaaaatagtctggcacaggaggagtcttttgac
atctcgagtggcagcaaccagcctaaacctgcatcgacttgtgcacaaaatggtgataac
tgcccttctaaagtagtgaccagggccagccagatgaaggacctattggaaaggaaagga
cgttcattgtgtgcggcaccattccaaggctgctcatccaaagtggaagatgacagtatg
gcaaattttcccaagcctgatgcaactgcagaaacagtgcgggcactaaagaaagatgat
ttgtttactggaagttcattatcatctcctggtagcagcactgaccagataccatcttca
acaatgtcaagcagggaagtttttgcaaggttaattgatgccagcaacttgaatacttca
tatcaacctgacgaagagcttgtggatccttctgcaaccacggatgtttctcattcattg
gaagactttcggaggacagatttcaaaagcttttctgaactaccaccagacctggaccct
tgtgcacagttcaagggcgctgtttacttcagcaccgattatgatacgtgcagattgcca
tcacaacctgcactctccaaagttcgggctctctgccacggcattagaccacctaggccg
gtgactcaccttgaccagacaccatttgatgaatctgtgaaatcgcggttgtgctccaag
gggtttcgtggtccaacatgcattcagtcagtagtctggcccgcagtgatgtctggtaga
gacattgttgctgtggcaccaccacactcgggcaagacacttgcttacctgatcccactg
gtttcaagattgatgtctgaaactgactacgagaatctgcctgcaggcgttggaccccta
atggtagttttaacgtccacgtggaaaggagctcgccgcctaagtgagcaggccaaactg
cttgtccatgaaaaaagaggtcctaaagtatgtgccttgtatgctggaggagcagaaaaa
ggaaaagaggcagagattgtcaatggctgtgatatcctggtagcaactccccactgtttt
ctgcgctttctgaccaattatgatcgtctcatcgtcaacttgcatcggtgctgccatttg
gtcttggatgatggcgaacggttgctggacaagtttgctgtagaggttacttcggtgatg
aatgagtttcgacggtgtgtggaacggcgccagccaggcatgcttcatggccaaattgta
gtttgctcaacaatgtggtctagtggcttgaactggtttatacgtatgacatccttgagc
aaaacccctttgatcatgtttacctcattctacgaagctgccatctacgcacaagttcca
acagttgccttttatggtgacccccgcagtcgacaagaggtattgctcagaattgtggaa
ggcagccagggtcgaaaagttgttgtgtgcactgccgacagaaaatcagccatttctttg
catcggttgctgttgtcatcgtgtgtctattgcctgctgctacatgatgagcttacaatg
gcgaagacgtgggaaatcacaagcgaatggaatactgagcgtccaaagaccatcatgcct
gtccttgtggctcaagacaacatgctgccattggccaacattcatgacgcggctgttctt
atccattacgacgtacctgaattgtccaagtacaactttggctttcgcttctccgtcctt
gctgaccgcatgcgttcattcaaggatgagggtgccgtctctactcctgaagagcctgtg
gcccacatgatactttcaagcaacaaccacagtctctctgtacagcttgtggagtttctg
aacaggctaggcaccaatgttccagatggacttgcaaggcttgctgttgaggagcaagca
aaagcatcgtcaaatcccatggtggccctctgcccaaatctgaaagcattcggtcattgt
gaaaggcagacagcagagaagcgctgctcgtatcgccatgaggtcttgtgtggagcagat
cactccagggtatgggaggacctgccatctcaaggccaactcctcattgtagtaaccaaa
gtggtgaatgcaacacgcttttatgcatggattctccaacactgggatactccacctaat
tcaacaaacgaaagaaaattggaagtcaaggaaaatctggagcttcagaatgccatgatg
tttctgaatgacttcttctcaaagccaagtaacttgaaatatgtggacactaatgccatg
cccaaagttggcgaagtgtatgggctggagtacagtgtcggccatttccacagggtcttg
gtgacttcagttatgccaaagagttcggctccagctagcatcactgtgtcacacatggac
tatggcggccagtcaactgttgctgcaacaagattacttcgtctaccacctcagctaact
aagctgcggcctttcgcagtggaagtgtactgttgtcgtgtccagccacaggaccgcgac
ctcgattggactttccaggcagtctacaaggcacatgagcttgttttcaggaaagagctt
cttggcaagattgtcctgcggcttggaaataccttgtggcttgacccacttgtcttgtgg
gaaagtcttccctttgttgatgcaaaggtgcctttaaagaatgtgagaactaccttaatt
gaagaacgccttgcttgtaataatgcaacccatcttgaaagcctgtgcgacttggttgct
gatgcaggagtgccactacctattctctcagaaaagaacaaagaagggaatggcagtgac
aacccaaatgttgttgtcaaccagcactgtaccactttccttgacatgcaggatttcaat
catgtgtacctctggaaggtcacctctccatctgatttctacatacagcctttgaagttc
aattcatgcttggatgagcttgaggataacatccagaaggctatgaagaaaagggaattg
actaagcggaagtttgtgcatcgtggagtagtgtgcatcgctcgctacaataacgataga
tggtatcgtggagaagtgcaggaagttctcaacagcgcagatgtcatcgtgttttttccc
gactatggagatactgcgagatgccctcaagatgagctgtttaagcctctttcatggatg
atgttgctgccataccagggcgttcagtgctctttagcaggaatcgattcaccatctggg
aactggagcccaatggctcagtccgtacttgatgactttggctatgatgacaacgatgtg
aaccgcctgctgtgtctcagggttgtgaaaaagaatgccggtgagcgtcctgggacaaac
tgttatgaggttctcttgttcagcacctgtaatgaagaaagaatcagtgcagctgatctt
cttgtagagcaggggcttgcggtctcaacaaagctgccaaagcttagctttgatgtcaac
cttccacattcaacagtacctctagagggggcaggggcctatgacactgagagcgatgag
gatggagaagaagtaacgcttgagtgccaaagaaaactggaggagcatgtgtatggtgtg
tttagtgaagttcgggaccagatccttgcacctgcagcagctgaactcatgcaggagtta
agttgtgaaagtggcgcacttggccaaggagacacttcttgccagccccaagcaaaagag
tcagaggcaccaccaccaccacaattgggcaaacaaagtgatgaaaaggcggcagcaaaa
agggttaaaccagccaaagcccatttgcgagcctttacaaagaattgccctccgctgctg
gagtcgcagttgaaggcagaacatagccgtcaagcatccatctcgtggtggcaagatcat
agctttgtctatgtggacatcttgatttcaaacgtaaaggagtacaagctggatgttact
gcaaagatgttttgcatcagggttaaaacagcacagcatgagtacctagctcatgagagg
ctttatgctgccattgtaccgaagaaagcaagattggtagtgaaggctgactccttgagg
atcacccttgagaaaataagagcgaaacatacatggaagtttctaactagaaacaagcga
aaggtgcagtacattcactatgaactggatcatattgatgtgagtgatgatgagaacgag
atagtcagagcctgcaaagctttcaaagacccactctacacaggttatgagcgtccagca
cagatcttgccgtatgacccagtggctcatgaagaaagagttagagaaattgaagctgga
attgaagacattgacgattcagaagcgcacatgtatttcagtgttgacccaaataatatt
tttgatgacttcactgaatag
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integrated database retrieval system
