Rhipicephalus sanguineus (brown dog tick): 119374357
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Entry
119374357 CDS
T07382
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
rsan
Rhipicephalus sanguineus (brown dog tick)
Pathway
rsan03013
Nucleocytoplasmic transport
rsan03015
mRNA surveillance pathway
rsan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rsan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119374357
09122 Translation
03013 Nucleocytoplasmic transport
119374357
03015 mRNA surveillance pathway
119374357
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsan03019
]
119374357
03041 Spliceosome [BR:
rsan03041
]
119374357
03009 Ribosome biogenesis [BR:
rsan03009
]
119374357
03012 Translation factors [BR:
rsan03012
]
119374357
Enzymes [BR:
rsan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119374357
Messenger RNA biogenesis [BR:
rsan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
119374357
mRNA cycle factors
Stress granule specific factors
119374357
Spliceosome [BR:
rsan03041
]
Complex C
Other components
EJC/TREX
119374357
Ribosome biogenesis [BR:
rsan03009
]
Eukaryotic type
90S particles
Helicases
119374357
Translation factors [BR:
rsan03012
]
Eukaryotic type
Initiation factors
eIF-4
119374357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Utp25_C
Motif
Other DBs
NCBI-GeneID:
119374357
NCBI-ProteinID:
XP_037500367
LinkDB
All DBs
Position
11:23315912..23405617
Genome browser
AA seq
424 aa
AA seq
DB search
MARKVKTRVASQDKTKRTTQTSKMAARRRVVQAEDLSNVEFETSEDVEVIPTFDAIGLRE
DLLRGIYAYGFEKPSAIQQRSIKPVIKGRDVIAQAQSGTGKTATFSIGVLQTIDTQVRET
QALILSPTRELAVQIQKVILALGDYMNVQCHACIGGTNLGEDIRKLDYGQHIVSGTPGRV
FDMIKRRNLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPCTQVVLISATLPHEILE
MTSKFMTEPVRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTK
RKVDWLSEKMREANFTVSSMHGDMPQKERDAIMKEFRSGQSRVLITTDIWARGIDVQQVS
LVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNV
ADLI
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggctagaaaggtcaagactagggtggctagtcaagacaagacaaaacgtactacacaa
acgagcaaaatggcagcccgtcgccgtgttgtgcaggcagaggatttatcgaatgtagag
tttgaaaccagtgaagatgtcgaagtgataccgacgttcgacgccatcggcctcagagaa
gaccttctgcgaggcatttatgcatatggttttgagaagccatctgccattcagcagcgc
tctatcaagccagtcattaaaggcagggatgtgattgctcaggcccagtcgggcacgggc
aagacggccaccttctccatcggagtgttgcagaccatcgacacgcaggtacgggagaca
caggcactgattctttcacccacccgcgagctggccgtacagatccagaaggtgattctg
gcattgggcgactacatgaatgtccagtgccacgcctgcattgggggaaccaacctgggt
gaagacatccgcaagctcgactatggacagcacatagtgtctggcactccaggacgtgtc
tttgacatgatcaagaggcgaaacctgcgcactcgcgctatcaagatgctggtcctcgac
gaagctgatgaaatgctgaacaaagggttcaaggaacagatctacgatgtgtaccggtac
ctgccaccttgcactcaagtggtgctcatctctgctactctcccccatgaaatcctggag
atgaccagcaagttcatgacagaacctgtacgaattcttgtcaaacgtgatgagttgacc
ctggaaggcatcaagcagttctttgtggccgtagagcgcgaggagtggaagttcgacacc
ctgtgcgatttgtacgacacgctcaccatcacccaggccgtcatattctgcaacaccaag
aggaaggtggactggttgagtgagaagatgcgggaggctaacttcactgtctcgtccatg
catggtgacatgcctcagaaggagagggatgccatcatgaaggagtttcgctcgggccag
agccgagtgctcatcacaacagatatttgggcacgtggcattgatgtgcagcaggtgtcc
cttgtcatcaactatgatctgccgaacaaccgagagttgtacatccacaggattggacgg
tccggtcgttttggtcggaaaggtgttgccatcaattttgtcaaaaatgacgacatccgc
atcttgagagatattgagcagtactacagcacccagattgacgaaatgcccatgaatgtt
gctgacctcatctga
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