Rhipicephalus sanguineus (brown dog tick): 119374692
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Entry
119374692 CDS
T07382
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
rsan
Rhipicephalus sanguineus (brown dog tick)
Pathway
rsan03013
Nucleocytoplasmic transport
rsan03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rsan00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119374692
03015 mRNA surveillance pathway
119374692
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsan03019
]
119374692
03041 Spliceosome [BR:
rsan03041
]
119374692
Messenger RNA biogenesis [BR:
rsan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
119374692
Spliceosome [BR:
rsan03041
]
Complex C
Other components
EJC/TREX
119374692
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_memA
Pinin_SDK_N
Motif
Other DBs
NCBI-GeneID:
119374692
NCBI-ProteinID:
XP_037500794
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All DBs
Position
11:39931298..39949261
Genome browser
AA seq
469 aa
AA seq
DB search
MIPKMAASGVFSLLKAEFEAAQKSLKDVDETIKKLTGRDPEEFRNQARRQGGPAQKAAAE
QGGRERFTKKPGVAIGGPPAKRRNLGGPPLRTPIKAPAEDSGDDEELPRKGGVQSSVVAA
PAKESLRTRREVSALQKGDRKCMERNRRMFGMMLGTLQKFQSEETKRKDQVQSQKRAEIE
QKLEEAAEREKAELRKERQDLFLARRQKQQGLRRLELKLEVARLHEEAEARQRLLLNFIH
TRTKPHIMFKPARHTPETQKRLKESQKRILAIIESRRAKIKEELDAIDELYHRDNMIVQA
GEEEEEEIHRDKENWGPSKDQSAEEEEQATADSSADPSVATEKCDRVEAKSEPTDNGEVA
EGATTAATADGKAAEPIDTAEPEEAAKEHSAADDRAEPGAAKEAPTDPESAEGSTEPSED
EPTVKADATSEESAKAEEEAPKEETPAAPTEVPSINALGDEKFEPIYDE
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgatacccaagatggcggcgtctggtgtgttttcgctgctcaaagccgagtttgaagct
gcgcaaaagagtctcaaggatgtcgacgaaaccatcaagaagctcacgggccgagacccc
gaggagttcaggaaccaagcccggcgacagggagggcctgcgcagaaggctgccgccgaa
caaggtggtcgggaacggttcacgaagaagccgggcgtcgcaataggaggtccccctgcc
aagcggagaaacctcggaggaccgccactgcggacaccaatcaaagctcctgcggaggac
agcggtgacgatgaagagctaccaagaaagggtggcgtccagtcctcggtggtggcggca
cctgctaaggagtcgctgcgcacgcgccgggaggtgagtgccctgcagaagggggaccgc
aagtgcatggagcgcaatcggcgcatgttcgggatgatgctgggcaccctgcagaagttc
cagagcgaggagaccaagcgcaaggaccaggttcagtcccagaagcgtgctgaaattgag
cagaagctggaagaggcggccgagcgtgagaaggctgagctgcgcaaggagcgtcaggac
ctgttcctggcacggcgccagaagcagcaaggcctccgtcggctagagctcaagctggag
gtggcccgcctgcacgaggaagccgaggcccgccagcgactgctgctcaacttcatccac
acgaggaccaagccgcacatcatgttcaagccagccaggcacacgcctgaaacacagaag
cggctcaaggagtcccagaaacgcatcctcgccatcatcgagagccgacgcgccaagatc
aaggaagagctggacgccatcgacgaactctaccaccgcgacaacatgatcgtgcaagcc
ggtgaagaagaggaagaggagatccaccgggacaaggagaactggggaccctccaaggac
cagtctgcggaggaagaagagcaggccaccgcggacagcagtgcagacccctcagtcgcc
acggagaagtgcgaccgtgtcgaagcgaaatccgaacccacggacaatggcgaggttgcg
gaaggggcgacgacagcggcgaccgcagacggcaaggctgcagaaccgatagacaccgcg
gagcccgaggaagccgcgaaggagcactctgctgctgatgaccgggccgaacctggggcg
gccaaggaagctcccaccgaccctgagtcggcagagggctcgaccgagccttccgaagac
gagccaacagtgaaagccgacgccacgtcggaggagtcagctaaagccgaagaggaagcg
ccaaaggaagagacgccagccgctcccaccgaagttcccagcatcaatgcgttaggagac
gaaaagtttgaacccatctacgacgaataa
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