Rhipicephalus sanguineus (brown dog tick): 119378820
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Entry
119378820 CDS
T07382
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
rsan
Rhipicephalus sanguineus (brown dog tick)
Pathway
rsan03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rsan00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119378820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsan03021
]
119378820
03019 Messenger RNA biogenesis [BR:
rsan03019
]
119378820
Transcription machinery [BR:
rsan03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
119378820
Messenger RNA biogenesis [BR:
rsan03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
119378820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_3
zf-CCHC
zf-CCCH_2
zf-CCCH_4
zf-CCHC_3
Nab2-like_zf-CCCH_
Motif
Other DBs
NCBI-GeneID:
119378820
NCBI-ProteinID:
XP_037503771
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All DBs
Position
1:complement(259231779..259237762)
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AA seq
283 aa
AA seq
DB search
MEEIVAKVGNVVFELEMALEQQLGALPLPFPGMDKSGAAVCCFYVQGNCSKASACPFRHV
KGDRTVVCKHWLRGLCKKGDQCEFLHEFDMTKMPECYFYSRFNACSNKECPFLHIDPEAK
IKDCPWYDRGFCRHGPICRHRHTRRVMCINYLCGFCPDGPECKFMHPKFDLPIQDPAQQA
KKANIVCHFCGEAGHKAISCHKMPAELREEQQHSRMQFHNHYGGMHRRDHDDSGGANAGG
QRGFRPLDQVTCYKCGEKGHYANKCPKGHLAFLSSALQNTPNV
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaatagtagccaaagtaggaaatgtcgtgttcgagctggagatggccctggag
cagcaactgggcgcgctgccgctaccgttccccggtatggacaagtctggagcagccgtg
tgctgcttttacgtgcaggggaactgtagcaaagcgtctgcgtgccctttcaggcatgtt
aagggtgaccgaacggtggtctgtaagcactggctgcgaggcctttgcaagaagggtgac
cagtgcgagttcctccacgagttcgacatgaccaaaatgccagagtgttacttctattcg
cgtttcaacgcgtgtagtaacaaggagtgcccgtttctacacatagatcccgaagcaaaa
atcaaagattgtccctggtatgaccgcggcttttgtcggcacggcccaatctgtcgccac
cggcacactcggcgcgtcatgtgcatcaactacctttgcgggttttgtcctgacggaccc
gagtgcaaattcatgcatcccaagtttgacttgcccattcaggacccagcgcagcaggcg
aagaaggccaacattgtatgccatttttgcggcgaggcagggcacaaagcaatatcctgc
cacaaaatgccagctgaactgcgggaggagcagcagcactctcgcatgcagttccacaac
cactatggcggaatgcaccggcgggatcacgacgacagcggaggcgctaacgctggagga
caacgaggcttcagaccgctggatcaagtcacttgctacaagtgtggagagaaaggacat
tatgccaataagtgcccgaagggacatttagccttccttagcagtgcacttcaaaacaca
ccaaacgtgtag
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