Rhipicephalus sanguineus (brown dog tick): 119382593
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Entry
119382593 CDS
T07382
Name
(RefSeq) LOW QUALITY PROTEIN: PAN2-PAN3 deadenylation complex subunit pan3-like
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
rsan
Rhipicephalus sanguineus (brown dog tick)
Pathway
rsan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rsan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119382593
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsan03019
]
119382593
Messenger RNA biogenesis [BR:
rsan03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119382593
mRNA degradation factors
3'-5' decay
Pan complex
119382593
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pan3_PK
zf-CCCH
zf-CCCH_4
zf_CCCH_4
Pkinase
zf-CCCH_2
Torus
zf-CCCH_9
Motif
Other DBs
NCBI-GeneID:
119382593
NCBI-ProteinID:
XP_037506282
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Position
2:complement(27429753..27470411)
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AA seq
760 aa
AA seq
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MNGSLVGPKKTAICRYFATGGTCFYGSECQFLHGPSTTPCLNTDLGIRDSPLSLMVRTPE
GTTSPALDPVFQAFHHHRTXPAESKLKTYMNVSARTISPSSLDKSKMFSSSNSISPNEIT
SALSSLALDSARKAPNPGAAEFVPMNSMLGPGQLTHSTSTPSFSQFSGSLNLTPGTSPYS
RLAPDTPSGLSLGKMESPGLSPDGSPLVSRRSQSPMSVGGYLNAQRESFPPTTVYQEFLG
GTTYFYQHEEAGNTTEEGQAVLLPEYQMYPGNPAHIEFMKPKANAPSFFLPDELRMDILH
RQSLSLAQRNPEVNTDLPAEVDNYHNICPLEPSSSNGPPKSSTFGYVTSVYKATKHQDGC
CYCLRRVHGFRLSNTKCMAVVDLWKKLQHSNLVHLREVFTTKAFGDHSMVFVYDYHAGAD
TLMNQYFSQPSVPTLNGFCPPIYPQPSNGLTRPFSHGKPALGSLRQHAGLLPESLIWAFV
VQLSSVLRTIHAAGLACRSFEPSKILVMGKSRLRLNCCGIMDVLTFDSAVPSAKALVPHY
QQEDLVSLGKLVLALACNTMAAIQRENLQQSMDLVSRNYSTDLRNLILYLLSSPPRTHSI
NDIMPMIGARFYTQLDAAQMRSDVIENELAKEVENGRLFRLLVKLGTVSERPEFHLDTSW
SETGDRYMLKLFRDYLFHQVTKDNRPWIDMAHVVQALNKLDAGVPEKICLMSRDEQNILV
VSYAELKQCLESSFSELLSATSSVPPTSSLPPPPANQHAR
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaacggttctcttgtaggaccgaagaaaaccgcaatatgtcgctacttcgctaccggg
ggaacttgtttctacggttccgagtgtcaattcctgcacggaccgtctaccactccttgc
ttgaacactgacctaggaatacgtgattcaccactgtcactcatggtgcggacacccgaa
ggtaccacaagtcccgccttggaccctgttttccaagcttttcaccaccatcgaaccnnt
cccgctgagtccaaactcaaaacatacatgaatgtatccgcacgcacaatttcaccgtcc
tcactggacaaatcgaaaatgttttcatcttcaaacagcatctcacccaatgaaattaca
agtgccctatcatcattggctctggactctgcgagaaaggctccgaaccctggtgctgct
gagtttgtaccaatgaacagcatgttaggccccggccaattaacacacagcaccagcaca
ccctcattctcacagttttctggaagtctaaacttgacccctggcaccagcccatacagc
cggttagcacctgacacgccatctggcctctctctgggtaaaatggaaagtcctggcttg
tctcctgatggctctcctcttgtgagccgccgcagccagtcaccaatgtcagtcggaggc
tacttgaatgcacagcgggaatcttttcctccaacaacagtttatcaggaattcttgggc
ggcaccacctacttttaccagcacgaagaagccggaaacacgacggaggaaggccaggct
gtcctacttcctgagtaccagatgtatcctggcaacccagcacacatagagttcatgaag
cccaaagccaatgcaccctccttctttcttccagatgagctcagaatggacatcttgcat
cgtcagagtttaagccttgctcaaagaaacccagaagtaaacactgacctgccagcagaa
gtggacaactatcataacatttgcccgctggaaccaagttcctcgaacgggccgcccaag
tccagcacttttggatatgtgacgtccgtctacaaggcaacgaaacatcaagacggctgc
tgctactgcttgaggagggtgcatggcttccgtcttagcaacaccaagtgcatggcagtg
gttgacctctggaaaaagttgcagcactccaaccttgtgcacttgcgggaggtgttcacc
actaaggcattcggagaccactcaatggtgtttgtctatgactaccacgctggtgcggac
accctgatgaaccagtacttcagccagccttctgtgccaacgctgaatggtttctgcccg
cccatctatccacagccttccaatgggctcacaaggcctttttcacatggaaagcctgct
ctgggctccttgcgccagcatgctggactgctgcccgagagccttatctgggcttttgtg
gtccagctaagttcggtgctgcgtaccatccacgccgctggccttgcatgccgttccttt
gagccttccaaaattctggtcatgggcaagtcacgtctgcgcctcaactgctgtggcatc
atggatgtgctcacttttgactcagctgtgcccagcgcaaaggcacttgtgcctcactat
cagcaagaagacttggtttccttggggaagttggtacttgccctggcctgcaacaccatg
gctgcgattcagcgcgaaaacttgcagcagtcaatggatctggtgtctcgcaactactca
actgacctcaggaacctgatcttgtacctgctgtcctcgccacctcgtacgcacagtatt
aatgacataatgcccatgattggagcacgcttctacacacagctggatgcggctcagatg
cggagtgatgtcatcgaaaacgaacttgcaaaggaagtggaaaatggaaggctcttcagg
cttcttgtgaaacttggcacagtcagtgaaagaccagagttccatctcgacacatcgtgg
tctgaaactggcgaccgttacatgcttaagctgttcagagattacctcttccaccaagtc
acaaaggataacaggccttggatagacatggctcatgttgtgcaggcattgaataagctg
gatgcgggcgtgcccgaaaaaatctgcctcatgtcacgggacgagcaaaacattcttgtt
gtcagctatgctgagctgaagcagtgcctcgagtcttcgttcagcgagctgctgtctgcc
acttcatcagtgccacctacgtcgtctcttcccccgcctccggctaaccaacacgcacgg
tga
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