Rhipicephalus sanguineus (brown dog tick): 119383126
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Entry
119383126 CDS
T07382
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
rsan
Rhipicephalus sanguineus (brown dog tick)
Pathway
rsan03022
Basal transcription factors
rsan03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rsan00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119383126
09124 Replication and repair
03420 Nucleotide excision repair
119383126
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsan03021
]
119383126
03400 DNA repair and recombination proteins [BR:
rsan03400
]
119383126
Transcription machinery [BR:
rsan03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
119383126
DNA repair and recombination proteins [BR:
rsan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
119383126
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_TFIIH
BSD
Motif
Other DBs
NCBI-GeneID:
119383126
NCBI-ProteinID:
XP_037507061
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All DBs
Position
2:68811234..68868161
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AA seq
535 aa
AA seq
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MGTSSEDVLLMVSNVRYKKNNGTLYLMAERIAWMLEGKDSFSVSHKYADIKMQKISPDGK
AKVQLQVVLHGAEGSATTFHFVNPLGTQAQLEDRNSVKELLQQLLPKFKRTLNSDLEEKN
RILQEDPRLFELYRNLVVSRVITPEEFWANHAPKKAGSTQVSPASQPVGVSAAFLVDVQP
QTDGTEGLKYNLTADIIDSIFRTYPAVKRKHLENVPERMTESEFWTRFFQSHYFHRDRLH
TSTRDLFSDCARSDDKDIQEAIAKGFRDPFVDISSFQDIESFNERDLPGSVASAGSVANH
SMIRRFNHHSMMVLRACGNDKDAPMEPSSQEENPLAIKHAKVWEKTQLEDLVGNNGSGSG
FPVRLGQGERHQRGPTAGDSSATPEAHVAPSILQRELSNWTPSGQGILPASAALSVLGEL
SPGGALMKNAQQVPLKDTVSLDVQRDLRSIYTAQFELLRHFWTCFPSTSAQLEEKAINMR
STLERFQYAQLQPFRDKLLREHHAPDLAGHLDDLLQAAYTKFSSWQSRRLSLGRR
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgggcacatcgtcggaagacgtcctcctgatggtgagcaacgtgcgctacaagaagaat
aacggcaccctctatttgatggcagagcgcattgcgtggatgttggaaggcaaggactcg
ttttccgtgagccacaagtatgcggacatcaaaatgcaaaagatatcccccgacggcaag
gccaaagtgcagctccaagttgttctgcatggtgccgagggctccgcaaccactttccat
tttgtcaatcctctgggcacccaggctcaactggaagacaggaacagtgtcaaggagctg
ctacagcagctgctgcctaagttcaaaaggaccctgaattctgaccttgaagaaaaaaac
aggattcttcaggaagacccacgcctgttcgagctgtacaggaacttggttgtcagtcgt
gttatcaccccggaagagttttgggccaaccatgctccaaagaaggccgggagcactcag
gtgtcccctgcatcacagcctgttggagtctcggcagcatttctcgttgacgtccagccg
cagacagacggcacagagggcctcaagtacaatctcacagctgacatcatcgactccata
tttaggacgtatcccgctgtgaagcggaaacatctggaaaatgttcccgagcgcatgacc
gaatcggaattttggacgcggttcttccagtcccattactttcaccgagaccggctacac
acgagcacacgggacctgttttctgactgtgctcgcagtgacgataaagatatacaggag
gctattgcaaaaggattccgtgatccctttgttgacatctcatctttccaagacatagaa
tcatttaatgaacgggacctgccaggttcagtggcatctgcggggagtgtcgcgaatcac
tctatgattcgtagattcaaccatcattcaatgatggtcctacgagcctgcggtaatgac
aaggacgcccctatggagccttcttcccaagaagaaaatcctcttgctataaagcatgcc
aaagtgtgggagaagacacagctggaggacctagtgggtaacaacgggagtggcagtgga
ttcccggtgcgactgggccagggtgagcggcaccagcggggacccacggctggcgacagt
tcggcaacgcccgaggctcacgtggcacccagcatcctgcaacgagagctctcgaattgg
acgccctcggggcaaggaatattgcctgcctcagccgccctgtcggtcttgggtgaatta
tctcccggtggcgctctcatgaagaatgcacagcaggtgcccctcaaagacacagtgagc
ttggacgtgcagcgagatcttcgcagcatctacacagcccagttcgagcttctgcggcac
ttttggacatgcttccccagcaccagtgcgcagctcgaagaaaaggcaattaatatgagg
tctaccctggaacgcttccagtatgctcaacttcagcccttccgagacaagctgcttcgc
gagcatcatgctcctgatttggcgggccatctggatgaccttctgcaggctgcctacacg
aaatttagcagctggcagtctcggcgtttatcgctcgggcgaaggtga
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