Rhipicephalus sanguineus (brown dog tick): 119383263
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Entry
119383263 CDS
T07382
Name
(RefSeq) nuclear pore complex protein Nup54
KO
K14308
nuclear pore complex protein Nup54
Organism
rsan
Rhipicephalus sanguineus (brown dog tick)
Pathway
rsan03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rsan00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119383263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsan03019
]
119383263
Messenger RNA biogenesis [BR:
rsan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119383263
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
CR6_interact
Nup54_C
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
119383263
NCBI-ProteinID:
XP_037507255
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Position
2:84750802..84780246
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AA seq
645 aa
AA seq
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MFGAPAKPTGFGFTGFGTATTTAAPTFGTATPGVGFNMTFGQPANTAAPGTGFTFGQPAA
GTGTGFTFGQPGATTFGQPAAATTTSGFTFGQSAAAPTAATGFGFGQPAATTTSGFSFGQ
SAAGQPAAATTTPSFTFGQPTTAAASTGFGFGQPAATGTGFGFGAQPSTAAPTFNFGSTT
ATTTAPAFTFGATTTTASSTGFQFGGFGANTTTTQSNPFGGTSLFSTGFGSSAAPSFGGA
ASAAGSAAAAAASAASNLTNLATALSLPAVFNDERDNILAKWNQLQAFWGTGKGYFSATA
PPVVFTTENPFCRFKAVGYSRLPQAKPEDGLLALLFEKKLEDVQPMQAQLVEGLQRALGN
KPNVAVCVEGLKSLDVNRCELVVYVMERAPTGQTRRFPSNEVVSYLEQATVKSQLTNMGV
HSVISKAAATKDWLKVYLNNPPCGIDTLLWEQAKLDNPDPERLIPVPMIGFAELRRRFKL
QEHEIKQHQCRLDAIAEDISKLQIQHTNTVAKIEEHKRKQQNLYHRILKVMVHHEVSRKM
GFAIQPEEEHLRTMLESNLGELSAPTQFRGRLNELMSQIKLQNNQMTFTDTTIHCSLEPS
SLSLLKEHLQTQQRGISELVKVIKYDLEELKKMESSLQGTAAPRR
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgttcggcgctcctgcgaaaccaacggggttcggctttaccggatttggcacggctacc
acgacagcggcaccaacgttcgggaccgctacacctggggttgggttcaacatgacgttc
ggacagcctgctaacacagcagcccctgggacggggttcacgtttggacaaccggcagcg
ggcaccggcacaggtttcacattcggccagccgggcgcgacgacatttggccagccggcc
gctgccacgacaacctccggattcacgtttggccagtccgcagctgcccccactgcggca
acgggatttggctttggccaaccagcggccacaaccaccagtgggttctcattcggtcag
tcggctgccggtcaacctgctgcggccacgacaacccccagtttcacatttggccaacca
accaccgccgcggccagcaccggctttggcttcggccagccagcggcaacaggcaccggg
tttggatttggcgctcaaccgagcacagcagcgccgacgtttaatttcggcagcaccaca
gcaaccactacggcaccagcattcacgtttggagctacaacaacaacggctagtagcact
ggctttcagttcggaggatttggtgccaacacgaccacaacgcaaagcaacccctttgga
ggcacttcactattttcgacgggttttggcagcagtgcggccccttcattcggtggtgct
gcctccgcggcaggttctgcagcagcggcagcagcctcagctgccagcaacctcaccaac
ttggcgacggcactgtctctgcccgctgtgttcaatgacgagcgggacaacattttggcc
aagtggaatcagctgcaggcattctggggcaccggcaagggctacttctcggctacggca
cctccggtggtgttcactaccgagaaccccttctgtcgattcaaggctgtcggatatagc
cggctgccacaagccaagccagaggacggcctgttagcactgctgtttgagaagaagctg
gaagatgtgcaaccaatgcaggcgcagctggtggagggccttcagcgcgcattgggcaac
aaaccgaacgttgctgtctgtgtcgaaggtctcaagagcctcgatgtcaacaggtgcgag
ctggtcgtgtacgtaatggagcgtgctccaacgggacaaacacggcggtttccctccaat
gaagtggtgtcgtacctggaacaggcaaccgtgaagtcccagttgactaacatgggagtg
cactctgtaatctccaaggcggccgccaccaaggactggctgaaggtctacctcaataac
ccgccctgtggcatagatacattgctgtgggagcaggccaagttggacaacccagacccg
gagcgactcatccccgtgccaatgattggctttgctgagcttcgccgtcgtttcaagctt
caggagcatgagatcaagcaacaccagtgtcggctagatgcaattgctgaggacatctct
aagctccaaattcagcacaccaatacagtagcaaaaattgaagagcacaagaggaagcag
cagaacttgtaccacaggatactcaaggtcatggttcaccacgaagtcagccgcaagatg
ggctttgcgatacagccggaagaggagcatctgcggacaatgctggagtccaacctgggt
gaactcagcgcgccgacacaattcaggggtcgcctgaatgagctgatgtctcagatcaag
ctgcagaacaaccagatgacattcactgacacgacaatacactgcagccttgagcccagt
tcattgagtctgctcaaagagcacctgcagactcagcagaggggcatctctgagttggtg
aaggttatcaagtacgatctcgaagaactgaagaaaatggaaagcagtcttcaaggaacg
gctgctccaagaagatag
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