Rhipicephalus sanguineus (brown dog tick): 119383294
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Entry
119383294 CDS
T07382
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
rsan
Rhipicephalus sanguineus (brown dog tick)
Pathway
rsan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rsan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119383294
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsan03019
]
119383294
Messenger RNA biogenesis [BR:
rsan03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
119383294
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
119383294
NCBI-ProteinID:
XP_037507290
LinkDB
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Position
2:complement(86424106..86430705)
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AA seq
275 aa
AA seq
DB search
MAAEFRLLQSRLHLAQRQGPYERSDGRELNERRPTALNIGSISTADGSALVKMGCTTVVC
GVKAELAEPAVTAPKQGFIVPNVDLLPLCSPMFKPGPPCEQAQALSKMMLDILNSSESVN
LEKLCIEEGKLSWCLTIDLTCLDYDGNMAEACILAATAALCSLTLPKVDTSDGEVNVLLE
REKVDISDGPLAATFAVLADDTIVVDPTHEEECLAAETFTVVLNANDNICGVHKPGGFAL
GTDQMCQHVETARKLVKDTRDLLSTALSNVTQCTA
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagagttcaggctactacaatctcggctccatttggctcaacgccagggaccg
tacgaaagatccgatgggagggagctgaacgagagaaggccaacggccttaaacataggg
tctatatcgaccgctgacgggtccgcgcttgtcaagatgggatgcacaacagtagtctgt
ggcgtgaaagcggaacttgctgaaccagcggtcactgcaccgaaacaagggtttatagtg
ccaaatgtggatctgctgcccctttgctctcctatgtttaagccaggacccccgtgtgaa
caggcccaggccttaagcaagatgatgctcgatattttgaacagttcagaaagtgtaaac
cttgagaagttgtgcatagaggaagggaagctttcttggtgccttaccattgatctgaca
tgtctggactatgacggaaacatggcggaagcgtgcatcttagctgccactgcggcactc
tgttcattaacgctgcccaaagtagacacgagtgatggtgaagtcaatgtgctgctggaa
agagagaaagtagacatcagcgacggacccctggcagccacatttgcagtccttgctgac
gacactattgtggttgacccgacgcatgaagaagaatgtcttgccgcagagaccttcacg
gttgttttgaatgccaatgacaacatttgtggagtccacaaaccaggtggctttgcgcta
ggcacagaccagatgtgccaacatgtggaaaccgcaaggaagctagtgaaggacactcgt
gatttgctttctacagcgctgtcgaatgttactcagtgcactgcctag
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