Rhipicephalus sanguineus (brown dog tick): 119383311
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Entry
119383311 CDS
T07382
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
rsan
Rhipicephalus sanguineus (brown dog tick)
Pathway
rsan03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
rsan00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119383311
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsan03021
]
119383311
03036 Chromosome and associated proteins [BR:
rsan03036
]
119383311
Transcription machinery [BR:
rsan03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
119383311
Coactivators
SAGA/TFTC/STAGA complex
119383311
Chromosome and associated proteins [BR:
rsan03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
119383311
STAGA complex
119383311
TFTC complex
119383311
SAGA complex
119383311
SLIK complex
119383311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
TFIID_NTD2
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_Nup120_160
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_DCAF12
PROPPIN
Beta-prop_SPT8
PEP5_VPS11_N
Beta-prop_WDR19_1st
Beta-prop_WDR75_2nd
WDR54
Beta-prop_NWD2_C
WD_LRWD1
Thioredoxin_6
ARM_KNTC1_1st
Mala_s_1-like
Motif
Other DBs
NCBI-GeneID:
119383311
NCBI-ProteinID:
XP_037507317
LinkDB
All DBs
Position
2:complement(87515547..87531631)
Genome browser
AA seq
606 aa
AA seq
DB search
MKKNRNEMVAAAVGRYLKGRQYMDCDSFKKADVKLQQSVADYALNGTVASETGAKNVLSY
SPVNKDAQAVEQQFSKLKNFIADACEPFKSELTFMLFPVFVHLYLELISNGQKSSAQKFH
NRHRSTFQSSDQYRMIMDMLPSITSASDVPSHPHVKEFRENKYSVKLSDDSLEYVLNFLR
DSDNLILLQVFNLHIDIDVQLAHEKMNGDAQALGLQQQLVSSSTAARAGSADNKQAPSIE
HCKESLTSLRQAIKNVKEGAPCIPSICLYTVNDRLSGLCSASQVEDGSLLACGFEDSSIR
LWSLLPRPLRTDPPDVDISRVRLYCDDDEMGHCGAPQESDSRLLRGHRGPVYDLDFLPGK
ELMLSCSEDTTVRAWSLKTHSNVSIYRGHSYPVWDLDVGPLGLYFATASKDSTAKIWTLE
RTYPLRILAGHNMDVDCVKFHPNSNYVATGSSDRCLRLWSVQDGRVVRSLPAHRGTIFAL
AFSPDGQLLASAGEDRRIKVWDLGSSSLLKELRGHTDAVYSISFSRDGSVLASGGAEPLV
HLWDLRRSVGSSPSDADPNGHMSPEHLASFPTSTSALHLVRYAPRNLLTLAGSAAAGTGA
DISSIS
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagaacagaaacgaaatggttgctgcagcagtcggtcgctacttaaaaggaagg
cagtacatggactgcgattccttcaagaaagctgacgtgaagctgcagcaaagcgtagcc
gactatgcattgaatggaacggtggcttccgagacgggagccaaaaatgttctaagctac
agccctgtaaataaggatgctcaagctgtagagcagcagtttagcaagctcaagaacttc
attgccgacgcttgcgaacccttcaagtccgaactcaccttcatgttgttcccagtgttt
gtgcatttgtaccttgaactcatcagcaatggtcaaaagtcttcagctcagaagtttcac
aatcgtcatcgaagcacatttcaatcatcagaccaatatcgtatgatcatggacatgctg
cccagcataacttctgcatcagatgtaccgtcccatcctcatgtaaaagaattcagagaa
aacaagtattcggtaaaactctcggatgacagcttggagtatgttttaaattttttgagg
gatagcgacaacctcattttgctacaagtcttcaacttgcacattgacattgatgtacag
cttgcgcatgaaaaaatgaatggggatgcgcaagccttgggcttgcagcagcagttggtc
tcatcatcgacagcagcgagagctggcagtgctgataacaagcaggcaccttccattgaa
cactgcaaggaatcattaacctccttacgtcaggccatcaagaacgtcaaggaaggggcc
ccctgcattccttccatctgcctctacacggtcaacgaccgtctgtctgggctctgttcg
gcgtcgcaagtggaagacggcagcctcttggcttgtggctttgaagactcatctattcgg
ctctggagtctgctgccacgtcccctcaggacagacccacccgatgtggacatcagcaga
gtcaggctgtactgcgatgatgacgagatgggtcactgcggcgcaccccaggagagtgat
agcagattgctgcgaggccaccgcggccccgtgtatgaccttgacttcctgcctggaaaa
gagttgatgctatcgtgctccgaagacaccacagtgcgagcgtggagcttaaaaactcac
agcaatgtttccatctaccgaggtcactcatatcctgtctgggaccttgatgttgggcca
ttggggttgtactttgccacggcgtcaaaagacagcacggcaaagatctggacacttgag
agaacgtacccactgaggatactagctggccacaacatggacgtggattgcgtgaagttc
catcccaacagcaactacgtggcgactggttcgagtgaccggtgcctgcggctctggtca
gtgcaggacggccgggtggtgcgcagtttgcctgctcaccggggaaccatctttgctctc
gccttctctcccgacgggcagctgcttgcctcagctggtgaggaccgcaggatcaaagta
tgggacctggggagctctagcttactcaaggagctgcgaggccacacggacgcagtctac
agcatctctttcagtcgtgatggctcagtgcttgcctctggtggtgcagagccacttgtt
cacctctgggaccttcgacgcagcgttggatcttcaccgagtgacgcagatcccaatggc
cacatgtctccggagcatctggcaagctttcccacatccacatctgcacttcatctggtg
cgatacgcacctcgaaacctcctcacccttgctggttctgcagcggctggtaccggtgcc
gacatctcttccatttcttga
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integrated database retrieval system
