Rhipicephalus sanguineus (brown dog tick): 119383475
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Entry
119383475 CDS
T07382
Name
(RefSeq) transcription intermediary factor 1-alpha isoform X1
KO
K08883
tripartite motif-containing protein 33 [EC:
2.3.2.27
]
Organism
rsan
Rhipicephalus sanguineus (brown dog tick)
Brite
KEGG Orthology (KO) [BR:
rsan00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
rsan01001
]
119383475
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsan04121
]
119383475
Enzymes [BR:
rsan01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119383475
Protein kinases [BR:
rsan01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
119383475
Ubiquitin system [BR:
rsan04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
119383475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_5
CDC45
Motif
Other DBs
NCBI-GeneID:
119383475
NCBI-ProteinID:
XP_049268490
LinkDB
All DBs
Position
2:101886659..102059655
Genome browser
AA seq
1261 aa
AA seq
DB search
METHDGAQTTTEQVTGGPAEDAGLDTKCVFCKQDVSETSEPQLLPCLHTACKLCIPTDPT
VRCAECQQEISSTDVISHLFLMEHLASNSEAKTGETTGTHTCTSCEDSATATGFCVDCQD
WLCQACIDAHQRVRVTKDHTIRAKDELEGDKPAALGQKYMFCENHKQEQLKLYCETCDKL
TCRDCQLQEHKDHKYQFISSACEQQKSNLNGLLAKIREKQSYIEGARNLVSKRHHEITQQ
EQKVTSDIKMFAVRFITEINKRGKLLLQELNDICNKKKLQLSSKNEELMALSLKLAQCHK
FAEAAINRGSDVALVFSKKTICNQMRTVLKTRCEIPNPQHVVDIKFLYEADFLTNYIGDL
GCILVDQQAIVGNPPWSASAKAAALNQHRGGPPPDTVSSAQQQQQQQQTQQQQQQQPVPR
YPEGFHPAMPTGPGPGLYHHLPYSQMWPAMSEQFSPQQRQGPMGAVHGIPPGVRPPPYPG
PNPYAVPGGGYPGAPPPQLRHLLNQGPMNQKGGASMAALSHMARMGPSAAGGTYTLQKSP
HPPPQHPSQAMRPQPGVRQQHGMPSHQALAAQQAAMMRQQQLHHMQQQQQHHQQQQQHHQ
QQQQQHHQQQQHHQQQQQQQQHHQQQQHHQQQQQQQQQQQQQQQQQQQQMPTSASVPITL
NSSITISPVTTDKSRPAPVSGLPRPPPLAPGVQIIPQPAPKVIMLDTAAARAAALQQQQM
RRASSSRDGTPPSTSRLPSHLVAGSTSSGSGSPRLPETSVLERVLLGAVGDASDLSGRNS
AITITPVGAAPSSTSSSSSSRTASPSVSVVRIKEEPKSPEQQLPSCSGDAGPSSNTLRSS
ASPAETAAGLASRSLNDFANRSIGNLLQSTGSKDTSQEKGSQGGQPQADSSCSPSSIAEP
VCSSSSRTASTVSASTANSTTVAPAGSGGVQDCFEDLSTLEELLKIGDKSFDLPAQDASS
SSSSTMAVATSNGPTAASNGSSAAQASPSSRTPPTQNSGGGDTANGTGLKIVETHSLQSS
DPNEDWCSVCHDGGELLCCGSCPRVYHLQCHVPSLGATPSEDWTCLLCLDILKCNIPRES
AGSKRKTPVGLSGRELLICERILLHLFCHELSVPFHIPVSRTVPNYYKVITKPMDLTTIK
QKLSPSHFNHYEDVPEFLADVKLIFKNCYTFNHKAIDGYKVWNKGNIYKAFAKESQVCQQ
ARTLERDFDALVQQFLPEHYAELRDAQPDPQPGYESDPERRKRARTSSTSSSPPEQTVIL
S
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atggagacgcacgacggcgcacagaccaccaccgaacaggtgactggcggtcccgctgaa
gacgccggactggacacgaagtgtgtattttgtaagcaggacgtttcggaaactagcgag
ccacagctactgccgtgtctgcacaccgcctgcaagctatgcatcccgacagatcccacc
gtccggtgcgcagagtgccagcaggagatctccagtacggacgtgatcagtcacttgttc
ctaatggagcacctggctagcaacagcgaggccaagacgggtgagacaacagggacacac
acgtgcacaagctgcgaggacagtgcgaccgctacaggcttctgcgtggactgccaagac
tggctgtgccaagcttgcatagatgcccaccagcgcgtccgcgtcaccaaggaccacaca
atccgtgccaaggatgaactcgagggagacaagccggccgctctcggtcaaaagtacatg
ttctgcgagaatcacaagcaggaacaacttaaactgtactgcgagacatgtgacaagctg
acatgtcgtgactgccaactccaggagcacaaagatcacaagtatcagttcatttcatca
gcatgtgagcaacaaaagagcaaccttaacggcttgctggccaagatccgtgagaagcaa
tcgtacatcgagggcgcccgcaacctggtgagcaaacggcaccacgaaatcacccagcaa
gagcaaaaggttaccagtgacatcaaaatgttcgctgtcaggttcatcactgaaatcaac
aagcgaggcaagttgctgctccaggagctcaacgacatctgcaacaagaaaaagttgcag
ctctcgtccaagaatgaggagctgatggctctctcgctgaaactcgcacagtgccacaag
tttgccgaggccgcgattaaccgtggaagcgatgtggcactcgtttttagcaagaaaacc
atctgcaatcagatgcggacggtgctgaagactcgctgtgaaatccccaacccacagcat
gtggtggacatcaagttcctatatgaggccgacttcctcacaaactacattggggacctg
ggttgcatcctggtcgaccaacaggccattgttggcaacccaccgtggtctgcctctgcc
aaggcagcagcccttaaccagcatcgtggtgggccgcctcccgacacagtgtcttcagca
cagcagcaacagcagcagcaacaaacacaacaacaacaacaacaacagcctgtcccccgg
taccctgaaggtttccaccctgcaatgccgactggcccagggcctggactttatcaccat
ttgccctattcacagatgtggccggctatgtcggagcagttctctccgcagcagcggcag
ggacctatgggtgcagtgcatgggatacctcctggcgtgcgcccgcctccctatcccggc
cccaacccgtatgcggtgccgggagggggctacccgggggctcctcccccacagctgcgt
catctgctgaaccagggccccatgaaccagaagggaggtgccagcatggctgccctcagc
cacatggctcgtatggggccctcagcggcaggtggaacgtacaccctgcagaagagccct
catccaccacctcaacatcccagtcaggcgatgcgcccacagccaggcgtgcggcagcag
catggcatgccgtcacaccaggcgcttgctgcccagcaggcagccatgatgaggcagcag
cagctgcatcacatgcaacagcaacagcagcatcaccaacagcaacagcagcatcaccag
cagcagcagcagcaacatcaccagcaacagcagcaccatcagcagcagcaacagcagcag
caacatcaccagcaacagcagcaccatcagcagcagcagcaacaacagcaacagcaacag
caacagcagcagcagcagcaacaacagatgccgacctctgccagtgttcctatcactctt
aactcgagcattaccatatcccccgtgactaccgataagtcgaggccagcgcccgtgagt
ggtctacccaggccaccgccgctggcacccggcgtacaaatcataccacagcctgccccc
aaggtgatcatgttggacacggcagccgctcgagcagcggccctccagcaacagcagatg
cgcagagcgtcaagctcgcgggacggcacgcctccctccacgagccgtcttccgtcgcac
ctggtggcaggcagcacgagctcggggtctggttcgccacgcctgcctgaaaccagcgtt
ctcgaacgagtcctcctaggagctgtcggggatgcgtctgatttgtctggcaggaacagt
gccatcaccatcacgcctgtgggggcagcgccctcttccacttcgtcctcctcgtcgtca
cgcactgcgtccccatcggtgtccgtggtgcgcatcaaggaggagccaaagtcgcctgag
cagcagctgccctcgtgcagcggtgacgcgggtccgtcatcaaacacgctgcgcagctca
gcatcgccagccgagacagccgcggggctcgcctctaggtctctgaatgactttgcaaat
cggtctataggaaacctacttcagtctactggctcgaaggacacaagtcaggagaagggt
tcccaaggtggccagccccaagcagacagcagctgcagcccttcctccatagctgagccg
gtctgcagcagttcctcccgcaccgcatctacggtgtccgcgtccacggccaactcgacc
accgtggcgccggcaggttccgggggcgtccaggactgcttcgaggacctctcaactctg
gaggagctgctcaagatcggcgacaagagcttcgacttgcccgcgcaggacgcctcttct
tcctcttcttcgaccatggccgtggccactagcaatggcccaacggctgcctccaacggt
tcttctgcagcgcaggcctcgccttcctcgcgcaccccaccgacacagaacagcggcggg
ggcgacacagccaatgggacgggactgaagatagtagagacgcacagcctgcagagctcg
gacccaaacgaggactggtgctcagtgtgccacgatggcggcgagctgctttgttgtggc
tcctgtccgcgtgtctaccacctacagtgccatgtgccctccttgggggcaacacccagt
gaggactggacctgccttctatgcctcgacatcctcaagtgtaacattcctcgggagtca
gcgggctccaagcgaaagactcccgtgggactcagtgggagggagcttttgatatgcgaa
aggatcctgcttcacctgttctgccacgagttgagtgtaccgttccacattcctgtcagt
cgaacggtccccaactactacaaggtgatcactaagcccatggatctgacgacaataaag
cagaagctctcgccgtctcacttcaatcactatgaggatgtgcccgagttccttgcggat
gtcaagctcatcttcaagaactgctacaccttcaatcataaggctattgatggttataaa
gtatggaataaaggcaatatctacaaggcattcgcaaaggagtctcaggtgtgtcaacag
gcacgaaccctggagcgggactttgatgccctggtccagcagttcttgcccgagcactac
gccgagctaagagatgcccagcccgacccgcagccgggctatgagtctgaccccgagcgc
cgcaagagggcccgcacgtcctccacatcttcctcacctcctgagcagacagtgattcta
tcctga
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