Rhipicephalus sanguineus (brown dog tick): 119383589
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Entry
119383589 CDS
T07382
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
rsan
Rhipicephalus sanguineus (brown dog tick)
Pathway
rsan03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rsan00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119383589
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsan03019
]
119383589
Messenger RNA biogenesis [BR:
rsan03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
119383589
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
119383589
NCBI-ProteinID:
XP_037507759
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Position
2:119907356..119928440
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AA seq
611 aa
AA seq
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MASATEDDDAWLYGDNEKADTGASNERSSDSKSQADDPTLLQNKDESQQDDREAGELSCE
DEQGQQSEDGPVTDPVEADSEAKGPSSEADKNGDAGDGADEDEDDDDDDDDDVQVTIRDI
KTSPYTTYPGPTQTVNLNIKRGPPFASNLGPGSGVPGVGKTKGLDIDEVALINGTSIYEF
NIESLEDKPWRKPGADITDYFNYGFNEDTWKIYCDRQRKLRSDNNVPIKDWRTGRNEVFL
GDAQLAWQQQRQQQQQQQQGTLPPEPLLPQVPIPPVNENSKYTGMGIGIPPPPLGSKKAG
PPPGRKMSGSIDVIGGGAPSLPSRRPGAAKEGVIQVIGSGDQPLGGITLPPTHMPPPGYM
GMGLDGLGVPPPIPGMIPGVPPPGYETGAFPPPRFTHPPPPLPGSAGGGPGGDRGSSYGD
DGRSSYYNGAGGYGQSYGDDGGGSGGGSWSGRERSERGHGSERGDRGDRERDRERERPSS
RRDYDDEERRESRRYREYYRERERERDRDRERDRRERGGGGEDEYEETSSSSRYERRHRE
HRGDKEERERHRSSRRRHHRGGDDEEEEERRSSKHKHKRSKKERPPVEEVEAPSSEAGGA
PDAGGDESKAD
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgccacagaggacgatgatgcttggttgtacggtgataatgagaaagcggac
actggtgcatcgaatgaaaggagcagtgattcgaagtcacaggcggatgatccaacactt
ttgcaaaataaagatgaatcgcaacaggatgacagagaagccggagagctcagctgtgag
gatgagcaggggcagcagtcggaggatggtccagtcacggaccctgtggaggccgatagt
gaagcgaagggtccaagttctgaggctgacaagaatggtgacgctggagatggagcggat
gaggatgaggatgatgacgacgatgacgacgacgatgtccaggtgacgatacgagacatc
aagacctccccgtacaccacctatccggggccaacgcagacggtgaacctgaacataaag
cgggggcccccgtttgctagcaatctgggtcccggatcgggggttccgggcgtgggcaag
accaagggcctcgacatagatgaggtggcactcatcaatgggacgtccatttacgagttc
aacatagagtccctagaggacaaaccgtggcgcaagccaggtgccgacatcaccgactat
ttcaactacggcttcaacgaggacacctggaagatctattgcgaccggcagcgtaagctt
cggtccgacaacaatgtgcccatcaaggattggcggacggggaggaacgaagtgtttttg
ggcgatgcccaactggcctggcagcagcagaggcagcagcaacagcagcagcagcaaggg
acccttccccctgaacctctgctgccgcaggttcccatccctccggtaaacgagaacagc
aagtacacgggcatgggcataggcatccctccgcccccactgggctccaagaaggcagga
cccccaccggggcgcaagatgtccggcagcatcgacgtcattggcggcggcgccccgtcc
ctgccaagccggcgaccgggcgccgccaaggaaggggtcattcaggtgattggctccggg
gaccagccactgggcggcatcacccttccaccgacacacatgccaccaccaggctacatg
ggaatgggcctggatgggcttggtgtgccaccgcccattccaggcatgatccccggcgtt
ccaccaccgggctatgagaccggtgccttcccaccaccacggttcacgcatccgccgcca
ccgctgccaggaagtgctggaggcggccccggcggagatcgtggctcgtcttatggtgat
gatggtcgctcgtcctactacaacggtgccggcgggtacggccagtcgtacggggacgac
ggcggaggcagtggcggcggctcttggtctggacgggaacgcagtgagcgcggccacggc
agtgagcgtggtgatcgtggtgaccgggaacgcgaccgggaacgcgagcggccctcgtcg
cgccgtgactacgacgacgaggagcggcgcgagtcacggcgctaccgcgagtactaccgc
gagcgggagcgagaacgcgacagggaccgggagcgtgaccggagagagcgaggaggtggc
ggcgaggacgagtacgaggagacatcgtcgtcgtcacgctacgaacggcggcaccgcgag
caccgtggggacaaggaggagcgagagaggcatcggtcgtcacgtcgccgccaccaccgt
ggtggtgacgatgaagaggaggaagaacggcgctcgtccaagcacaagcacaagcggtcc
aagaaggagcggccacccgttgaagaggtcgaggcgccgtccagtgaggccggtggtgcg
cccgatgctggtggtgatgagtcgaaggctgactga
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