Rhipicephalus sanguineus (brown dog tick): 119385240
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Entry
119385240 CDS
T07382
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
rsan
Rhipicephalus sanguineus (brown dog tick)
Pathway
rsan03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rsan00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119385240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsan03021
]
119385240
03019 Messenger RNA biogenesis [BR:
rsan03019
]
119385240
Transcription machinery [BR:
rsan03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
119385240
Messenger RNA biogenesis [BR:
rsan03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
119385240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCHC
Torus
zf-CCCH_3
zf-CCCH_4
zf-CCCH_2
zf-CCHC_3
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
119385240
NCBI-ProteinID:
XP_037508664
LinkDB
All DBs
Position
3:complement(207387452..207388381)
Genome browser
AA seq
277 aa
AA seq
DB search
MEEVVARVGNVVFELEVALDRQLGALPLPFPGMDKSGAAVCCFYLKGSCSKGSACPFRHV
KGDRTVVCKHWLRGLCKKGDQCEFLHEFDMTKMPECYFYSRFNACCNKECPFLHIDPESK
IKDCPWYDRGFCRHGPLCRNRHTRRVMCIKYLCGFCPDGPECKFMHPMFDLPVPDPAQQG
RNIVCHYCGETGHKALFCQKMPDDTRDEHQFRVQFINHHSGAYRRDHDDGGGPSTGRGKR
NLRPLDQVTCYKCGEKGHYANKCPKGHLAFLSSALHN
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagtagtagcccgagtagggaacgttgtcttcgagctggaggtggctctggat
cgacaactcggtgcgttgcctctgccttttcccggcatggacaagtctggagcagccgtg
tgctgtttctacctgaagggcagctgcagcaaaggatccgcgtgtccctttcggcacgtt
aagggcgaccggacagtggtatgtaaacactggcttcgcggtctttgcaagaaaggtgac
cagtgcgaattccttcacgagttcgacatgacgaagatgccagaatgctacttctactcg
cgtttcaatgcatgctgtaacaaggagtgcccatttctgcatatagatcccgaatcaaaa
attaaagattgcccctggtatgaccgagggttttgtaggcacggcccgctctgtcgcaat
cgacacacgcggcgcgtcatgtgcattaagtatctttgcggattttgccccgatggaccc
gagtgtaaatttatgcaccccatgttcgatctgcctgttccggaccctgcgcaacaagga
aggaacattgtgtgtcattattgtggtgagaccggtcacaaagcattattttgccaaaag
atgcccgatgatacgcgcgacgagcaccaatttcgtgtgcagttcatcaaccaccacagc
ggagcttaccgacgtgatcacgacgatggtggaggacccagcactggacgagggaaacga
aacctcaggccactggatcaagtcacctgctacaaatgtggtgaaaaaggacactacgcc
aacaaatgccccaagggacatttggctttcctcagtagtgctctccataattaa
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integrated database retrieval system
