Rhipicephalus sanguineus (brown dog tick): 119385958
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Entry
119385958 CDS
T07382
Name
(RefSeq) LOW QUALITY PROTEIN: 3'-5' RNA helicase YTHDC2-like
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
rsan
Rhipicephalus sanguineus (brown dog tick)
Brite
KEGG Orthology (KO) [BR:
rsan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rsan03041
]
119385958
Enzymes [BR:
rsan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
119385958
Spliceosome [BR:
rsan03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
119385958
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
HA2_C
R3H
DEAD
Helicase_C
OB_NTP_bind
HA2_N
AAA_22
ATPase
AAA_19
nSTAND3
Slx4
ABC_tran
PhoH
AAA_23
Motif
Other DBs
NCBI-GeneID:
119385958
NCBI-ProteinID:
XP_049270129
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All DBs
Position
3:complement(149054464..149091283)
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AA seq
1251 aa
AA seq
DB search
MTRKNKRNVAVGEAFRIAVTTALQKFYQTEDQTEYEFPSSFTAEERAFIHKYCQTLGIKS
KSRGKGSNRFLTAYKKVGSTIVQADAGFSMGPLSCRFAMLLLQKFPVNSHERQELLPPTE
RERLVGQEVRDVNRTTARLNCGIPQVPPRCEGTLDAQRQRLPIWQSRQKLLTTIAQNQVT
IIIGETGCGKTTQVPQYLLEQHSSLGNPCRIVCTEPRRLAAVAVAERIATERNEKLGHTV
GYQIRLENRVSPKTLLTVCTNGILLRTLMGNDSAMATISHVIVDEVHERDRFTDFLLTVL
RDLLPKFRNLKVILMSATMDVELFIKYFGGCPVVEVPSRSYEVKAYFLEDVLRLTGYTSQ
AMLNLKKSKPRAEQQKVQLAKWCDSKGITTTSTAPSANRQSPEEKQVCTGYPQIISHSIP
IAKLVFLAGKHTVAVSLAGAILVFLPGFDDMSTLRDKIIADKSFSGQKRYVLYMLHSNVQ
CSEQRLVFNTMPPGVRKIVLSTNIAETSITISDVTFVIDSGKVKEKSFDSLTGTSLLKSV
WVSQASAMQRRGRAGRTHPNGVCFHLMSRQRFCSLAPFQQPELLRLPLQELCLQAKLLVP
PNVPIADFLARAPDPPAFLVTRTAVTLLKTIDALDPSEQLTEMGLHLLDLPIEPHLGKMV
LYAVVLKCLDPVLTIVCCLAVKDPFVLPTQPGQRRPAYIARRKLAGNTYSDHMALLSAFQ
RWQKARAENSEHYFCERNFVSGATMSTALAVRGQLLGQLRASGFVRARGGGDIRDLNTNS
DNWAVIKAALCAGSYPNLLRVDRERRQLVAQRASRVRFSSRSVLSQPDTHSLGAPAAANA
RDGIIASLPTDWLIYGELARAGPTAFANMCTLVSPVTVALFAGPQRLPLDALYEPQSART
SGLGEDSDSEEEEESELQKCMLKLDDWISLKAEPEGGRLALQLRQKLQALFLRRMHSPAK
PWSQSDDAVIRAVVGVLTSEEEALNLPRPPPGIGQRPRPSGPDAYTLPPPAANDHRSQGG
AECFAGRRAVLRRGGSLEYGPSSSPSSRRGSGASLPATPLGMGRSDAGSSWCSDDRSDCS
SLRSTSSGQPSPCGTSPRHTVNGHCRYFIIKAGTHRAVDVSLSTGLWSLGPNTDRKIQAA
IREGKEVILIFSVHGSGQFQGYAVLQGPASNMNWPTDDHDGSSGGRCYFIKWNPRCNLPF
QNTRHLLNPWNENRKVQVSRDGQEVEPSVGEALCHLWDGLPDASAIQSVRR
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgaaaaaacaagagaaatgttgccgtcggggaagcgtttcgcatagccgtcacg
acggcacttcaaaagttctatcagactgaagaccagacagaatatgagtttccgtcatcg
ttcacggctgaagagcgagcttttattcacaagtactgccagacactgggtatcaagtca
aaaagccgagggaaaggatcgaatcgcttccttactgcctacaagaaagtcggttccacc
atagttcaggctgacgctgggttcagtatgggacccctctcgtgccgatttgccatgctg
cttctgcaaaagtttccggtcaattctcacgagcgccaggagctgttgcctcccaccgag
cgagaacgcctcgtcggtcaggaagtgcgtgacgtgaaccgcacaacagcacggctcaac
tgtggcattccccaagttccaccacgctgtgagggcaccctggatgcccagcgccagcgc
ctgcccatctggcagagccgccagaagttgctgaccaccattgcccaaaatcaagtgacc
atcataattggagaaactggttgcggcaagaccactcaggtgcctcagtacctgctggaa
cagcacagcagccttggtaatccctgccgcattgtgtgcactgagccccggcgactcgct
gccgtggctgtggctgagcgaattgctacagaacggaatgaaaaacttggccacactgtg
ggctaccaaatacggctggagaacagggtgtcgcccaagactttgctgacagtgtgcact
aatggaatcctcctgcgcaccctcatgggaaacgactctgcaatggcaacaattagccac
gttattgtggacgaggttcatgagcgtgatcggttcaccgacttcttactaactgttctg
cgggacttgcttccaaagttccgtaatctgaaagttattctgatgtccgctaccatggat
gtagagctgttcatcaaatattttggcgggtgtcctgttgtggaagtgccatcacgatca
tacgaagtgaaagcctactttctggaggatgtcttacgactaacggggtacaccagccaa
gccatgctgaatctgaagaagagcaagccccgagctgagcagcagaaggtgcagcttgcc
aagtggtgtgatagtaagggcataaccactactagtactgccccttcagctaacagacag
tcgcctgaggagaaacaggtatgcacggggtaccctcagattatatctcattccattcca
atagctaaactggtcttcctggccggtaaacacactgttgctgtttctcttgcaggtgcc
attctggtcttccttcccgggtttgatgacatgagcacgctgagggacaaaattatagca
gacaaaagtttttccgggcagaagaggtatgtgctgtacatgttgcactcaaatgtgcag
tgtagcgagcagcgactagtcttcaacacaatgccacctggagttagaaaaattgttttg
tcaaccaatattgctgagacaagcattaccatcagcgacgtcacttttgtcattgattct
ggcaaggttaaggagaagtcctttgacagcctgacaggtactagcctgctcaagtctgtg
tgggtgagccaggcgagtgccatgcagcgtcgaggccgggcaggccgcacccacccgaat
ggcgtctgcttccacctgatgagtcggcagcgcttctgcagcctggctcccttccagcag
cccgagctgctgcgcctgccgcttcaggaactgtgcctccaggcaaagctccttgtgcca
cctaatgttcccattgctgactttctggcacgggctcctgatccacctgcattcttagtt
acgaggacagctgtcaccctcctgaagacaatcgacgcattggacccatctgagcagctg
acagagatgggccttcacttgcttgaccttcccatcgagccacacctaggaaaaatggtg
ctctatgcagtcgtgctcaagtgcctcgacccagtgctcaccattgtttgctgccttgct
gtcaaagacccctttgtgctcccgacccaacctggccagaggcgacccgcatacatagca
aggcgtaagctggctggtaacacctatagtgaccacatggctcttctgtctgcatttcag
cgttggcagaaggcccgtgccgagaactctgagcactacttctgcgagcgaaacttcgtt
tctggcgccaccatgtccactgcactggcggtacgaggccagctgctgggccagcttcgg
gcatcgggctttgtgcgggctcgtggcggtggtgacatccgcgacctcaacaccaactct
gacaactgggcggtgatcaaagcagctctctgtgcgggctcctacccaaaccttctgaga
gttgaccgggagcgtcggcagctggttgcccagcgtgcctcgcgagtgcggttcagctca
cgttccgtcctgtcccagccggacactcacagcttgggtgcaccggcagcggccaacgct
cgcgatgggatcattgcctcactgcccactgactggctcatctacggcgagctggccagg
gcagggcccacagcctttgccaacatgtgtacgctggtttcacctgtcacagtggcactg
tttgctggcccccagcgcctacctctggatgccctctatgagccacaaagtgcaaggacc
agtggcctcggggaggacagcgacagtgaagaagaggaagagtcggagctgcagaagtgc
atgctcaagctggacgactggatttccctcaaggcagagcctgagggtggtcgcctggca
ttgcagctgcgccaaaagctgcaggcgctgtttctgcgccgcatgcattccccagccaag
ccgtggtcacaatcggatgacgctgtgattcgtgctgttgtcggcgtgctcacgtcagag
gaagaggccctgaatctgcctcgaccacctccgggcatcgggcagcgaccacggccttct
ggcccagatgcctacactttacctccaccagctgccaatgatcacaggagccagggtggg
gcagaatgttttgccggtcgtcgggcggtcctgcgccgtggtggatcgttggagtatggc
ccaagctcgtcgccatcctctcgcagaggctccggcgccagtctgccggcaactcccttg
ggaatgggacgttcagacgcaggtagctcatggtgctccgacgatcggtccgactgctca
tccctgcgctcgacaagcagtggccagccgagcccgtgtggcacaagtcccaggcacacg
gtgaacggccactgtcgatatttcatcatcaaggcaggcacgcaccgtgccgtggacgtg
tctctctcaacgggcctgtggtccttggggcccaacacagaccgcaaaatacaggcagca
atcagggaaggcaaggaagtgattctgatattctcagtgcacggaagcggacagtttcaa
ggttatgcggtgctccagggaccagcctccaacatgaactggcccactgacgatcatgat
ggcagttcgggtggccgctgctacttcatcaaatggaatcccaggtgtaacctgccattc
cagaataccaggcatctgttgaacccctggaacgagaaccggaaagtgcaggttagccga
gacggccaggaagtcgagcccagtgttggtgaggccctctgccacctttgggatggcctt
cccgatgcttctgccatccagtctgttaggcgctga
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integrated database retrieval system
