Rhipicephalus sanguineus (brown dog tick): 119386535
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Entry
119386535 CDS
T07382
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
rsan
Rhipicephalus sanguineus (brown dog tick)
Pathway
rsan04140
Autophagy - animal
rsan04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
rsan00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119386535
04148 Efferocytosis
119386535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsan04131
]
119386535
Membrane trafficking [BR:
rsan04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
119386535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
Clathrin
zf-RING_Vps41
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_HPS5
WD40_WDHD1_1st
WDR55
zf_RING_Vps8_fungal
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML_2
WD40
zf_RING_Vps8
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
zf-RING_11
TPR_GEMI5
EIF3I
Gin
zf-RING_5
Beta-prop_EML
Motif
Other DBs
NCBI-GeneID:
119386535
NCBI-ProteinID:
XP_037509731
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Position
3:33048845..33252222
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AA seq
852 aa
AA seq
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MEADNGDQDQEVSDEEEEMEPKLRYERILNDMPEILRHGAASCIAVHPKFIALGMHSGVV
YILDHQGNSIRNKELQLHKDSVLQLSIDEQGDHLASCSRDGKVVVHGLYTSDHNQVLTFD
RPVGAVAIDPNFYRSGSGRRFVTGVDKVVLYEKGFLSRYRTTILHQGEGPVRNISWKGRF
AAWATDLTILVYDMQVLDFICMISRDHDPLLKPELHRCILTWRDERCLLVGWADRVKVCC
IRQRDPSQSTVAEDNVQPKQEPSQRNPADIYVEIVSMFQTDYYVCGLAHLCSGSLVALTV
LKNIDNSAESSRPQLRVMEPHLGESVERSSDILSVRGFRAYRASDYCLDSLPEEGLFFVV
SPKDVIVAKPRDQDDHMDWLLQHEKYEEAVQVALSSRDLKRHTLQGVGMQYLEQLIERKD
FERAAEMCPTVFGADARFWEELVYRFACLRQLRCLAPVLPQGGLDPTAYEMVLNEFLQLD
PEGFLKLITEWDPALYSVPTVVNAVRDRLSYEPSSVPLLKGLAHLYSVEGKFDLAIAIYL
EIGAADAVFSLVQKHGLYGVVQEKLALLIRLDEEKANELLVKSTDQLPPDTVAERLSPQP
QALFRYLDALFRRSPALCEAQHMELARLYAEYAPDKLLPLLRQSHSYPLEEALRLCQERQ
LTPATIFLLKRMGNTKEALHQIMDKLGDVHQAIAFCKEHDDSELWADLIEYSLDKPPFIT
TLLHKIGAHVNPILLILRIPTGLDIPQLRDSLVKIMRDYNLQISLREGCKKILVSDCIGL
LQKLHRQQSRGIAIAYDQLCHACNRRILSKDVRHLEDVVVFFCKHAFHSNCLPSLPMCSL
CSADKQAQSLGA
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atggaagccgataatggtgatcaggaccaggaagtgtcggacgaggaggaggaaatggag
cccaagttacgatatgagcgaatcctcaacgacatgcccgaaatcttgcgccatggtgct
gccagctgtattgcagtacaccctaagttcatagcactgggcatgcactctggtgtggtg
tacatcctggaccaccagggcaatagcatccgcaacaaagagctccagctgcacaaggac
tcggtgctccaactgagcattgacgaacagggtgaccacttggccagctgctcacgtgat
ggcaaggtcgtcgttcatggcttgtacacgagtgatcacaaccaggtgctgacatttgac
cgtcccgtaggtgccgtggccatcgaccccaacttctatcgctctggctcgggaagacgt
ttcgtcacaggtgtcgacaaggtggtgctgtatgaaaagggtttcctgtcccggtaccgc
accaccatcttacaccagggggaaggaccggttcgcaacatctcctggaaaggacgcttt
gctgcctgggcgactgacctgacgatcctggtgtatgacatgcaagtgctcgatttcatc
tgcatgattagcagggaccatgaccccttgctgaaacccgagctccatcggtgcatcttg
acttggcgggacgagcgatgcctgcttgtgggttgggccgaccgtgtcaaggtgtgctgt
atccgccagcgagacccatcgcaaagcaccgtggccgaggacaatgtccagccaaagcag
gaaccctcacaacgcaacccagctgacatctatgtggagattgtgtccatgttccagacc
gactattatgtgtgcggcctagcacacctctgctcggggagtctcgtggctctcactgtg
ctcaagaacatcgacaactcggcagagagcagtcgtcctcagctgcgagtcatggaaccc
cacctgggtgaaagtgttgagcgttcgagtgacatcctttctgtgcggggtttccgggct
taccgagccagtgactactgcctagacagcctcccggaggaggggctgttctttgtagtg
agccctaaggatgtgatagtagccaagcctcgcgaccaggatgaccacatggactggctc
ctgcagcatgaaaagtatgaggaggccgtgcaggttgcattgtccagtcgtgatctcaag
aggcacacactgcaaggtgtgggcatgcagtacctggagcagttgattgagaggaaagac
tttgaacgtgcggccgagatgtgtccgactgtgtttggggcggatgcacgcttctgggag
gagctggtgtaccgctttgcgtgccttcggcaactgcgctgcctcgcccccgtgctgccc
caggggggccttgatcccacggcctatgagatggtgctcaacgagttcctccagctggac
cctgagggctttctcaagctcatcaccgagtgggacccggcactgtacagcgtgccaact
gtggtgaacgctgtgagggaccggctcagctatgagccgtccagcgtgcctctgctcaaa
ggcctggcccacctctactcggttgagggcaagtttgaccttgccattgccatctacctc
gagatcggcgcagcggatgcagtgttctctttagtccagaagcatggcctgtatggtgtg
gttcaggagaagctggcactcctgatccgactggacgaggagaaggccaacgagctgctg
gtgaaatccaccgaccagctgccgccggacaccgtagccgagcgtctgagtccacagcca
caagctttgtttcgttacctggatgcactgttcagacgcagccccgcattgtgcgaggcc
cagcacatggagttggcgcgcctgtatgccgagtacgcacctgacaagctgctaccactg
ctgcgccaatcacacagctaccctctggaagaggcacttcggctgtgccaggaaagacaa
ctcactccagccaccatctttctactcaaacgcatgggcaacaccaaggaggctcttcac
cagatcatggacaagctgggagacgtccaccaagccatcgctttctgcaaggagcatgac
gactcggaactctgggcggatcttatcgagtactcactcgacaagccacccttcatcacg
acattgctgcacaagattggtgcgcatgtcaatccaatcttgctgatcttgcgcatcccc
acggggctggacattccccagcttcgggactctctagtcaagatcatgcgggactacaac
cttcagatctccctgcgtgaaggctgcaagaagattctggtatccgattgcatcggcctg
ctgcaaaagctgcaccggcagcagagtcggggcattgccattgcctatgaccagctatgc
catgcttgcaaccgacggatactctccaaagatgtccgccacttggaggacgtggtagtg
ttcttctgcaagcatgcttttcacagcaactgcctacccagtctaccgatgtgcagcctc
tgcagtgccgacaaacaagcgcaaagcctgggagcctga
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