Rhipicephalus sanguineus (brown dog tick): 119386875
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Entry
119386875 CDS
T07382
Name
(RefSeq) PAN2-PAN3 deadenylation complex catalytic subunit PAN2
KO
K12571
PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:
3.1.13.4
]
Organism
rsan
Rhipicephalus sanguineus (brown dog tick)
Pathway
rsan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rsan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119386875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsan03019
]
119386875
Enzymes [BR:
rsan01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
119386875
Messenger RNA biogenesis [BR:
rsan03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119386875
mRNA degradation factors
3'-5' decay
Pan complex
119386875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH_1
PAN2_N
RNase_T
UCH
Beta-prop_THOC3
DNA_pol_A_exo1
Beta-prop_WDR36-Utp21_1st
DUF7476
Motif
Other DBs
NCBI-GeneID:
119386875
NCBI-ProteinID:
XP_049269230
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All DBs
Position
3:complement(103060284..103133247)
Genome browser
AA seq
1196 aa
AA seq
DB search
MEYAVPKYPVVGETGLEQFPGGLAHGQDYSFLQNILVDGGSQFGVTALAFDTQEELLWMG
NQGGHVTSYYTWQLQKYTSFQVHAANEVRQLLTIDAGVLSLTCNTLRLNNRRGLIAFHHS
SEELEDMNCMALSPSGSLLMGGNQTSLIELDLATGEQTTVADVGENGCAVIRRHPRFICC
ADFTGKVALRDPSTFKVEYTLESLSETGVLSDFDVLGNMVVTCGFTNRHGTLAVDPFIKV
YDLRVMRAVAPIQMMFPPLLLRFVPAFTSRLFVVSQTGQFQLVDTSTLTQASYIYQLETG
GAALHAFDTSSSCQALAFGDVAGYLHLYGASAHVNFNNFSQPTEFADPEEPLHPIDINDE
IAPLSTIPMPYCSGKLVSDLPKEFIKYVYRRPVPIDPVILNTMKMVGSIGYAPNPGLWKR
NEVRYPHEAHHRRTKETREETDMIPQWYKKIDVKYSKMGIEDFDFNLYNRTCFAGLETNL
PNAYCNNMIQVLYFTEPLRCAIMNHSCQREFCLACELGFLFHMLDTAQGIPCQASNFLRA
FRTIPEASALGLLLSDSDDARKKVNFPRLVQSWTRFVLQQIHSETPEVQDDEMQKTEKAG
EMGSQVSKLFGWTLLNSNQCRCGNIREKESTTLLCSLVYPEPLPPVPERVTPHYPFTEIL
KRSLCLESTMPAWCDKCEKYQPTLQSKRLKSLPEILTVSSGLENQQDLNFWQTQTEMFGN
KDSKAMSFCSSAPVPKRCRYGNCCTRAGCKFFHEKDKGKRYVASKVDVDTSVQSACSWLP
LSILVTLNHDGTVDICRADCKTEASTSQDTSSDTGKDDSIVGKDKKPSAGKEGQAGNGNE
GDDSEMKEDEVDVQREEEEAKAVLYELTSVVSVVNNSRTNIVSCIRVGPSYHIHHQGGPA
TQWYLFNDFTIVPISPEEAVWLPLDWKLPCVLHYTVADISNKPPPTVKAAVSAEVFQQDI
SLAANGGRRHVTFTPLSPSEILKQGDIVAMDAEFVTLNQEEAEIRSDGTRSTIRPSHMSV
ARISCIRGQGPLEGIPFIDDYIATQEQVVDYLTQFSGIQPGDLDVTISSKHLTTLKATYR
KLRYLVDEGVIFVGHGLKNDFRVINLVVPADQVIDTVLLFQLPNKRMVSLRFLAWHFLGL
KIQSKMHDSIEDAKTALRLYRKYQQLEREGRVTESLKEMYEAGRKSSWKVPGADEE
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atggagtatgctgtgcccaagtacccggttgtcggggaaactggcctggagcagttccca
ggtggcctggcccatggccaggactacagcttcttgcagaacatcctggtggatggtggc
agccagttcggtgtcactgcactggcctttgatacccaggaggaactcctttggatggga
aatcaggggggccacgtgacgtcctactacacctggcaactgcagaagtacacgtctttc
caagtgcacgccgctaacgaggtgcgccagttgctgaccatcgatgccggtgtcctgtct
ctcacctgcaacactcttcgcctcaacaaccgcaggggactgattgcattccaccacagc
tccgaagaattggaggacatgaactgcatggcactgtcgccctctggctcgttactaatg
ggcggtaatcagacaagcctcattgagctggatcttgccacgggtgagcagaccacagtt
gctgatgttggggagaacggctgcgctgtcataaggaggcacccacgctttatctgctgt
gctgacttcacgggcaaggttgcactgcgggacccgtcaacttttaaggtggagtacaca
ttagaatcactttcggaaactggtgtgctgtctgactttgatgtgcttgggaacatggtc
gtcacatgtggctttaccaacagacatggtacgcttgcggtggatccattcataaaagtc
tacgacctgcgtgtcatgcgtgctgtggcaccaatccagatgatgttcccacctttgttg
ctgcgctttgttcccgccttcacttctcgcctcttcgttgtgtctcagaccggtcagttc
cagctggtggacaccagcaccttgacccaagcgtcgtacatctaccagctggagactgga
ggtgcagctcttcacgcctttgacacttcctcatcctgtcaggccttggcttttggggat
gttgctggctaccttcatctctatggggccagtgctcatgtcaacttcaataatttcagc
caaccgactgaatttgctgacccggaagagccactgcacccaattgatatcaatgacgag
atagcccccctgtccaccatacccatgccctactgcagtggcaagctggtctctgacctt
cccaaggagttcattaaatatgtctacaggaggccagttccaattgaccctgtcatactg
aacaccatgaagatggtgggctccattgggtatgccccaaaccctggtctctggaagcgc
aacgaagtgcgctacccacacgaagcacaccaccgcaggaccaaggagacccgtgaagag
actgacatgatcccacagtggtataagaagattgacgtgaagtattccaaaatgggcatt
gaggattttgactttaatctctacaaccgcacatgcttcgcaggcctcgagacgaaccta
cctaatgcgtactgcaataacatgattcaggttctgtacttcacggagcccctgcgctgt
gccatcatgaaccacagctgccagcgagagttctgcctcgcatgtgagctgggctttctc
ttccacatgctggacactgcccagggcataccttgtcaggcgagcaactttcttcgtgca
tttcggacaattccggaggcatctgccttaggcctcttgctttccgattcggatgatgct
cgcaagaaggtcaacttcccacgactcgtgcagagctggacacgatttgtgcttcaacag
atacactcggaaacaccagaagttcaagatgatgagatgcagaaaacagagaaagctggt
gagatgggcagccaggtgagcaagctgtttggctggacgctgctcaattccaatcaatgt
cgttgtggcaacatcagggagaaggagtcgaccaccctactgtgctccctcgtctacccc
gagcctctgccccctgtacctgaacgtgtgacacctcactatcctttcaccgagatactg
aaacgaagcctttgcctcgaaagcaccatgcctgcctggtgtgacaagtgcgagaaatac
cagcccacgctgcaaagcaagaggctaaagtcattaccagaaatactgactgtcagctcg
ggtttggaaaatcagcaggacctcaacttttggcagacccaaactgaaatgttcggcaac
aaagatagcaaagcaatgtccttctgttcctcggctcctgtgcctaagcggtgtcggtac
ggcaactgctgcactcgggctggctgcaagttcttccacgaaaaagacaaaggaaagagg
tatgtggcttctaaagtggatgtggatacaagtgttcaaagtgcttgttcctggcttccc
ttgtctatactcgtcaccttgaatcacgatggaactgtggacatttgtcgagctgactgt
aagaccgaagcctccacatcccaagacacaagctcggacaccggaaaagatgacagcatt
gttgggaaagacaaaaagcccagtgcagggaaggaaggacaagctggtaacggcaacgaa
ggagatgactctgagatgaaggaggatgaagttgatgtgcagagggaagaggaagaagcc
aaagcagttctgtatgagctgacatcagtggtgtccgtggtaaacaacagccgcaccaac
attgtgagctgcatccgggtggggccctcgtaccacatccatcaccaggggggaccggcc
acccagtggtacctcttcaacgacttcaccatcgtgcccatttctcccgaagaagcggtg
tggcttcccctggactggaagctaccctgtgtcctgcactacacagtggctgacatctcc
aacaagcctccaccaacagtgaaggcagctgtgtcagcagaagtgttccagcaagacatc
tctttagcggcgaatggtggtcggcgtcacgtcaccttcactccgctttcaccgagtgag
atactgaaacagggcgacattgttgccatggatgcagagttcgtcaccctaaaccaagaa
gaagcagagatacggagtgatggaacaaggtctaccattcgtccatcccacatgtccgtc
gccaggatctcctgcattcgagggcaagggccccttgaaggaattccatttattgacgac
tacattgcaactcaagaacaggtggtggactacctgacccagttctcgggcatccagcct
ggtgacctggatgttaccatctcgtccaagcatctgaccacacttaaggctacttaccgc
aaacttcgctacctcgtggacgaaggagttatctttgtgggccacggcctcaagaacgac
tttagagtcatcaaccttgtcgtgcctgctgaccaagtgattgacaccgtgcttcttttt
caactgccaaacaagagaatggtatctctgcgtttcctggcctggcatttccttggactg
aagatccaatccaagatgcatgactccattgaggatgcgaagacggcgctgcgactgtac
cgcaagtaccagcagctcgagagggaagggcgggtcaccgagtccctgaaggagatgtac
gaggctggccgcaagtcctcgtggaaggttcccggtgccgacgaggaatga
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