Rhipicephalus sanguineus (brown dog tick): 119386933
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Entry
119386933 CDS
T07382
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
rsan
Rhipicephalus sanguineus (brown dog tick)
Pathway
rsan03020
RNA polymerase
rsan03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rsan00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
119386933
09124 Replication and repair
03420 Nucleotide excision repair
119386933
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsan03021
]
119386933
03400 DNA repair and recombination proteins [BR:
rsan03400
]
119386933
Enzymes [BR:
rsan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
119386933
Transcription machinery [BR:
rsan03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
119386933
DNA repair and recombination proteins [BR:
rsan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
119386933
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
Motif
Other DBs
NCBI-GeneID:
119386933
NCBI-ProteinID:
XP_037510151
EnsemblRapid:
LOC119386933
LinkDB
All DBs
Position
3:109567925..109613695
Genome browser
AA seq
1941 aa
AA seq
DB search
MSQIVTSDSKAPLREVKRVQFGILSPDEIRRMSVTEGGIKYPEIYEGGRPKLGGLMDPRQ
GVIDRTSRCQTCAGNMTECPGHFGHIDLAKPVFHCGFLTKTIKILRCVCFYCSKLLVNPN
NPKIKEIVGKTKGQPRKRLAHVYDLCKGKNICEGGDEIDTKLGPDSQVQEDTNKKQGHGG
CGRYQPSIRRSGLDLTAEWKHVNEDSQEKKIALTAERVWEILKHVSEEECVIMGMDPRYA
KPDWMLITVLPVPPLAVRPAVVMFGSARNQDDLTHKLADIVKANNELIRNEQSGAAAHII
AENIKMLQFHVATLVDNEMPGLPRAMQKSGRPLKSIKQRLKSKEGRIRGNLMGKRVDFSA
RTVITPDPNLRINEVGVPRSIAQNLTFPEIVTPFNIDKMHDLVRRGNNQYPGAKYIIRDN
GERIDLRFHPKASDLHLQCGYRVERHVRDGDIIVFNRQPTLHKMSMMGHKIKVLPWSTFR
MNLSVTTPYNADFDGDEMNLHVPQSLETRAEVEQLAMVPRQIITPQSNKPVMGIVQDTLT
AVRKMTKRDIFLEKDQMMTILMFLPIWDGKMPMPAVLKPKPLWTGKQIFSLIIPGNVNLI
RTHSTHPDEEDDGPYKWISPGDTKVLIEHGELISGIVCKKTVGASSGSLMHVVFAELGHE
VAGAFYGHIQTVVNAWLLLEGHTIGIGDTIADKQTFIDIKNTIEKAKHDVIDVIEKAHND
ELEPSPGNTLRQTFENQVNRILNDARDKTGASAQKSLSEFNNFKAMVVSGAKGSKINISQ
VIACVGQQNVEGKRIPFGFRKRTLPHFIKDDYGPESRGFVENSYLAGLTPSEFFFHAMGG
REGLIDTAVKTAETGYIQRRLIKAMESVMIAYDGTVRNSNGQVIQLRYGEDGLDGGTVEF
QSMPTLKPSNKSFEKKFRFDACNERYLRKVFTEDVVRELMGSATAVSELEKEWERLKKDR
EILRTIFPTGDSKVVLPCNLQRMLWNAQKIFRVNLRAPTDLSPLRVVQGVEELVKKLVIV
PGEDHLSIQANENATFLFRALLRATLCSKRVAEEFRLSTESFEWLLGEIETRFHQSQGQP
GEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINISKKPKTPSLTVFL
TGAAARDAEKAKDVLCRLEHTTLRKVTANTAIYYDPDPQNTVIAEDQEFVNVYYEMPDFD
PTRISPWLLRVELDRKRMTDKKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRIMN
SDDGKFQDEEEQVDKMEDDVFLRCIEANMLSDMTLQGIEAITKVYMHLPTTDNKKRIVLT
ETGEFKAIAEWLLETDGTSLMRVLSERDVDPVRTYSNDICEIFAVLGIEAVRKAVEKEMN
HVISFDGSYVNYRHLALLCDVMTAKGHLMAITRHGINRQDTGALMRCSFEETVDVLLDAA
SHAEVDYLKGVSENIIMGQLARMGTGAFDLMLDAEKCKYGIEIPMNLPMMGSLCGPGVFF
GSAATPMAGMSPQMTPWATGATPAYGSGWSPNVGSGMTPGGAGFSPSASSDASGFSPGAC
SPAWSPQPGSPASSPASPYIPSPSSPNYSPSSPAYAPSSPSLTPASPTYSPTSPSYSPTS
PSYSPTSPTYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS
PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYTPASPSYSPTSPSYSPTSP
SYSPTSPSYSPTSPSYSPSSPNYSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSP
GSPQYTPSSPKYSPTSPTYSPTSPSYSPSSPKYSPTSPKYSPTSPTYTPSSPKYSPTSPQ
YSPTSPQYSPTSPKYSPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSSYSPTSPGY
SPSSPTYSPTSPNIEEDSDND
NT seq
5826 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagatcgtgacctccgactcaaaggctcccttgcgggaggtgaagagggtgcag
tttggcatcctcagccccgatgaaatacggcgcatgtctgtgactgaagggggcatcaag
taccccgaaatctatgagggtggcaggcccaagctggggggcctcatggacccccggcaa
ggggtcatcgaccgcacctcgcgatgtcagacatgcgcgggcaacatgaccgagtgcccg
ggccactttggacacattgacctggccaagccggtgttccactgtggcttcctcaccaag
accatcaagatactgcgatgcgtctgcttctactgctccaagttgctcgtcaaccccaac
aatcccaagatcaaggaaattgtgggcaagacgaaggggcagccgcgcaagcgcctggca
cacgtctacgacctctgcaagggcaagaacatttgcgagggaggcgatgaaatcgacacc
aagctagggcccgacagccaggtccaagaggacaccaacaaaaagcagggtcacggcggt
tgtggccgctaccaaccgagcatccgcaggagtggcctggatttgacagcggagtggaag
cacgtcaacgaggactctcaagagaagaagattgccctgacggccgagcgcgtctgggag
atcctcaagcacgtttccgaggaggagtgcgtgatcatgggcatggacccccgctatgcc
aaaccagactggatgctgatcacggtcctgccagtgcccccgctcgccgtgcggccggcg
gtcgtcatgttcggctctgcccggaaccaggacgacttgacgcataaactggccgacatt
gtcaaggcgaacaacgagctgatccgcaatgagcaaagcggcgcagctgcccacatcatt
gcagagaacatcaagatgcttcagttccacgttgcgaccctggtcgacaacgaaatgccc
ggtttgccccgggccatgcaaaagtccggccgtcccctcaagtcaatcaagcagcggctg
aaaagtaaagaaggccgaattcgaggcaacctcatgggcaaacgagttgacttttcggcc
cgtacagtcatcacccccgacccaaacctgcgtatcaacgaggtcggagtaccccgctct
atcgctcagaacctcacttttcccgagatcgtcactccgttcaacattgacaaaatgcac
gacttggtgcggagaggcaacaaccagtacccgggtgccaaatacatcatccgagacaat
ggtgaaagaattgatcttcggtttcaccccaaggccagcgaccttcatcttcagtgtggc
taccgggtggagcggcacgtccgggacggcgacatcattgtgttcaaccgtcagccgacg
ctacacaaaatgtccatgatggggcacaagatcaaggtgctgccttggtccacattccga
atgaacctcagtgtgacaactccgtacaacgctgattttgacggagacgagatgaacctg
cacgtaccacagtctctggagacgcgtgccgaggtagagcagctagccatggtgccccga
cagatcatcacacctcagtccaacaagcccgtcatgggtattgtgcaggacactctcacc
gctgtccgaaagatgaccaagcgggatatcttccttgaaaaggaccagatgatgacaatc
ctcatgttcttgcccatctgggatggcaagatgcccatgccggctgtgctcaagcccaag
cccctgtggacgggcaagcagatattttccctcatcatccccggcaatgtgaacctcatc
cgaacacacagcactcacccggacgaggaggacgatggaccctataagtggatatcgccg
ggtgacaccaaggtgctgattgagcatggggagctgatcagtggcatagtgtgcaagaag
acagtaggtgcctcgtcgggctcgctgatgcatgtggtgtttgccgagctgggccacgag
gtggcaggggccttctacggccacatccagacggtggtcaacgcctggctcctcctggag
ggccacaccatcggtatcggcgacaccattgccgacaagcagactttcatcgacatcaag
aacaccattgagaaggccaagcacgacgtgatagacgtcatcgagaaggcccacaacgac
gagttggagccatcgccaggaaacaccctcaggcagaccttcgagaaccaggtcaaccgc
atcctgaacgatgcccgtgacaagactggtgccagcgcccagaagtccctgtccgaattc
aacaacttcaaggccatggtggtctctggagccaaaggctcgaaaattaacatatctcag
gttattgcctgtgtgggtcagcagaacgtagaaggtaagcggatcccgtttggcttccgc
aaacgcacactgccccacttcatcaaggacgactacggccccgagagccgtggcttcgtc
gagaactcgtacctggccggtctgaccccttccgagtttttcttccacgccatgggagga
agagagggtctcattgatactgctgtcaagactgccgaaacaggttacatccagcgtcgt
ctgatcaaagctatggaaagtgtgatgattgcctatgacggcacggtgcgaaacagcaac
ggccaggtgatccagctgcgttacggagaggatggcctcgacggaggcaccgtcgagttc
cagagcatgcccaccctgaaaccttccaacaaatcctttgagaagaagttccgtttcgac
gcctgcaatgagcggtacctgcgtaaggtgttcaccgaggatgtggtgcgtgaactcatg
ggcagcgccacagccgtctctgagcttgagaaggagtgggagcggctcaagaaggacagg
gaaatattgcgaaccatcttcccgacaggcgacagcaaggttgtgctgccgtgcaacctc
cagagaatgctctggaatgctcagaagattttccgggtgaacctgcgtgcacccacagac
ctgtctcctcttagggtggtgcaaggtgtggaggagctggtgaagaagctagtgattgtg
cctggtgaggaccaccttagtatccaggcaaacgagaacgccaccttcctgttccgggct
ctgttgcgggccactctgtgctctaagcgcgtggccgaggagttccgactctccacagag
tccttcgaatggcttctgggcgagattgagacccggttccaccagtcacagggtcagcct
ggtgagatggtgggtgctttggccgcccagtcactcggtgagccggccacccagatgacc
ctgaacactttccactacgccggtgtgtcggccaagaacgtcacactgggtgtgccccgt
ctgaaagagatcatcaacatctccaagaagcctaagacaccctcgctcaccgtcttcctg
acgggtgctgctgcacgagatgccgaaaaggccaaggacgttttgtgccggttggagcac
accaccctccgcaaggtgactgcaaacacggccatctactacgaccccgacccgcaaaac
acggtcattgcggaggaccaggagttcgtgaacgtctactacgagatgcccgacttcgac
cccactcgcatatcaccctggctgctccgtgtcgagctggaccgcaagcgtatgacggac
aagaagctcaccatggagcagattgccgagaagattaacgctggttttggtgacgacctg
aactgcatcttcaacgacgacaatgccgagaagctggtgcttcggatacgaatcatgaac
agcgacgatggcaagttccaagatgaggaggaacaagtggacaagatggaggacgatgtc
ttccttcgttgcattgaggccaacatgctgagtgacatgacactgcagggcatcgaagcc
atcacaaaggtgtacatgcacctgcctaccacggacaacaagaagcgcatcgttctcacc
gagactggagagttcaaggccatcgccgagtggcttctggaaacggacggcaccagcctc
atgagagtgctgagtgaacgggacgtcgaccccgtccggacatactccaacgacatttgc
gagatcttcgctgtgctgggaatagaggcggtccgaaaggccgtggagaaggaaatgaac
cacgtcatctcattcgacggctcgtacgtcaactaccgccacttggccctcttgtgcgat
gtgatgaccgccaagggacatctgatggccatcactcgtcacggaatcaaccgacaggac
acgggggccctgatgaggtgttcctttgaagagactgttgatgtgctcctggatgctgct
tcacatgctgaggttgactacctgaagggtgtctctgagaacattatcatgggacagttg
gcacgtatgggcacaggggcatttgacctgatgcttgatgccgagaagtgcaagtatggc
atcgagatccccatgaacctgccaatgatgggatccctctgtggccctggagtgttcttc
ggcagtgcagccacaccaatggctggaatgtctcctcagatgacaccgtgggcgacaggt
gccactccggcttatggcagtggttggtcacctaacgtgggaagtggcatgacaccagga
ggtgctggcttctcaccctctgcatcaagtgatgctagcggcttcagtccgggtgcctgc
agccctgcatggtcaccgcagccaggctcgccagcctcgtcacctgcatcaccttacata
cccagccccagctccccaaactactcgccctcgtcacctgcttatgcaccttcctccccc
tctctcactccggcttccccaacctattccccgacatctccgtcatactctcccacatct
ccatcctattcgccaacgtcacccacgtactcgcccacttcccccaactactctcccaca
tcgccgagttactcgccaacgtctccctcatactccccgacaagccccagctactcccca
acgtcaccatcctactccccaacatccccatcttattctccaacaagcccgagctactcg
cccacttccccttcctactcgccaacctccccgtcttactctcctacgtctccttcctat
tcccccacttctccgtcctactcaccaaccagtccaagctactctccaagttctcccaac
tacacccctgcgtcgccttcctactcgccaacctcgccttcttactccccgacatcaccg
tcctattctcccacctctccatcctactccccgaccagcccgtcctactcgcctagctct
cccaactattctcctcagagtcctagctactctccaggtagccccagttactcgccaagc
agtcccaagtactctccaacatctccgtcttactctccaacaagtccaagctattctccc
ggatcgccacagtacacaccgtcgtcccccaagtattctccgacctcgccaacgtattca
ccgacgtctccgtcgtactctccatcaagtccgaagtattccccgacgagtccaaagtac
tcgccaacgagtcccacttacacgccttcgtcacccaagtacagtccgacctcgcctcag
tacagcccaacgtcgccgcagtacagccccacatcgccgaagtactctccgacatcaccc
aagtattctccgacatcgccgacatattctcctacttcaccgaagtattcgcctacttcg
cctacttactctcccaccagtcccaagggctcaagctactccccaaccagtccgggctat
tccccatcctcgccaacttatagccccacgagccccaacattgaagaggatagcgacaat
gactaa
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integrated database retrieval system
