Rhipicephalus sanguineus (brown dog tick): 119387289
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Entry
119387289 CDS
T07382
Name
(RefSeq) CDK-activating kinase assembly factor MAT1
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
rsan
Rhipicephalus sanguineus (brown dog tick)
Pathway
rsan03022
Basal transcription factors
rsan03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rsan00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119387289
09124 Replication and repair
03420 Nucleotide excision repair
119387289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsan03021
]
119387289
03400 DNA repair and recombination proteins [BR:
rsan03400
]
119387289
Transcription machinery [BR:
rsan03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
119387289
DNA repair and recombination proteins [BR:
rsan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
119387289
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-UDP
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-P11
zf-RING_6
zf-C3HC4_2
TRAF3_RING
DUF3818
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
119387289
NCBI-ProteinID:
XP_037510558
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All DBs
Position
3:complement(140235313..140273856)
Genome browser
AA seq
314 aa
AA seq
DB search
MDELACPRCRTTKYRNPSLRLLVNVCGHALCENCVELLFVKGSGACPQCNVPLRRGNFRL
QIFEDSKVEKEVDIRRKILKDYNKREEDFETLRAYNDYLEEVETIIYNLANEIDVEATRR
KVEQYKRENKAQIQKGKLKASKDEEYLEEILEQERQETELRRDQLAEVEKAAQREKLKQK
ESLIDDLMFSDMPASKILASHGDKLKQVAGPKPLPPKPLAAEFSTGIKFRHKEAFLPIPK
VVEGPLYKYTAPTLDLCGPTAPSLESLSPLGYTNHVRATVEAEEAGGFLAGLACQRALQD
AFCGLHFKVAEEVS
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggatgagctggcatgtccacgatgccggacaacaaagtatcgcaacccttcattgcgg
cttttggtgaatgtctgcggccatgccctgtgtgaaaactgcgttgagcttctctttgtt
aaaggttcaggggcctgcccacagtgcaatgtgcctttgagaagaggcaatttccggctg
caaattttcgaagattcgaaagtagagaaggaggtggacatacggcggaagatactcaag
gactacaacaagcgtgaggaggactttgagacattgcgggcttacaatgactacctcgag
gaagttgaaaccataatttacaaccttgctaatgaaatcgatgttgaggcaacacgacgg
aaagttgagcaatacaaaagggaaaacaaggcccaaatacagaaaggaaagcttaaagca
tcaaaagatgaagagtacttggaagagattttggagcaagagcgacaggagaccgagctg
cgacgagaccagctggcagaagtggagaaagctgcacagcgtgagaagctgaagcagaag
gagtcgctgatcgatgacctgatgttctcggatatgccagccagcaaaatccttgccagc
cacggagacaagcttaaacaggtggcaggtccaaagccactacctccgaagccacttgcc
gcggagttctccacgggcattaagttccgacacaaggaggctttccttcccataccaaag
gttgtcgaaggcccactgtacaagtacacagcccccacactggacctctgcgggccaaca
gccccgagcttggagtctctttcacctttaggctacacaaatcacgtgcgagccacagtg
gaagcggaggaggccggaggtttcctggcagggctagcgtgccagagggcactgcaagat
gcattttgcggtctacatttcaaggtggctgaagaggtctcatga
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