Rhipicephalus sanguineus (brown dog tick): 119387808
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Entry
119387808 CDS
T07382
Name
(RefSeq) regulator of nonsense transcripts 3A isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
rsan
Rhipicephalus sanguineus (brown dog tick)
Pathway
rsan03013
Nucleocytoplasmic transport
rsan03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rsan00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119387808
03015 mRNA surveillance pathway
119387808
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsan03019
]
119387808
Messenger RNA biogenesis [BR:
rsan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
119387808
mRNA cycle factors
P-body specific factors
119387808
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
119387808
NCBI-ProteinID:
XP_037511249
LinkDB
All DBs
Position
3:183603773..183624665
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AA seq
489 aa
AA seq
DB search
MTQEKAKDECSPRSRSSSEASKSKEKKERPFLTKVVVRRLPPTMTEEQFLEQISPVPESD
YMYFVKGDLSLGPHAFSRAYINFVNQDEIFIFKEKFDDYIFVDEKGNEYPALVEYAPFQK
IPKRRTRKKDPKCGTIEQDPEYIKFLESLEQPEEVTLPSIDTYIEEIEARDKEIKANNGC
LKVVTPLIEYLQQRKLEKLAAQKLREERREERKRREVEKKRLRDEEKRRRKVDRDRATKE
PSMQRESSSAHYDDDMPQFDDVEPAPAKPQVVKVLRNPVREHEPPSATTAKDSGTGVVPK
SSAGTGGSHSKAPPVRSSMGGGSNARKDWERPKVPRPSKDYQGPKEYSKHKSEQPASSHS
RRGSTGSDGRGQEAGAPKASATTPATDDERTIAEGSRGAAPSTSTPAEGKNASSEKDRER
PSAHEESSQSRTKDPRAERRIRNKDRPSIEIYRPGMRRLSQKATSAQEESPSAGTKPSKS
ANSSSKPPT
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaggagaaagcgaaagatgaatgctcgcctcgaagtcgcagttcgagcgaggcg
tccaagtctaaggagaaaaaggagaggccatttctcacaaaggttgtagtccggaggctg
ccaccgacgatgacggaagagcagttcctcgagcagatatcccctgttcctgaaagcgat
tatatgtacttcgtcaaaggagacttgagcctgggcccccacgcgttctcaagggcttac
atcaatttcgtcaatcaggatgagatattcatcttcaaggagaagttcgacgattacatt
ttcgtcgatgagaaaggcaatgaatatccggcactagtcgagtatgcacccttccagaaa
ataccgaagcgcaggactcgcaagaaagatccaaagtgtggaacgatagaacaagacccg
gagtacatcaagtttctggaaagcctagagcaaccagaagaagtgacgctaccttctatt
gacacctacatagaggagatcgaagctagagataaggaaatcaaagcaaacaatggctgc
ctcaaggtggtaactcctctaattgaatatttgcagcagaggaaactggaaaagctggcg
gcccagaaactgcgcgaggagcgtcgggaggagcgcaagaggcgggaggtggagaagaag
cgcttgcgcgatgaagaaaagaggcggcggaaggtggaccgtgaccgtgcaactaaagag
ccaagcatgcaaagggagtcatcgtcagcccattatgatgatgatatgccccaattcgac
gacgttgagccagcaccagctaagccgcaggtcgtcaaggtgctgagaaaccctgttcga
gagcacgagccgccatcggcaacaactgcaaaggactcgggaaccggagtagtaccgaaa
tcgagcgcaggcacgggtggcagccattccaaggccccaccagtgcgcagttccatgggc
ggtggcagcaatgcacgcaaggactgggaacgtcccaaggtgcctagaccgagcaaggac
taccagggtcccaaagagtacagcaagcacaagagcgaacaacctgcttcctcccacagc
aggcgtggatcgacaggttccgacgggagaggccaggaagcgggcgccccgaaagcatca
gcaacgactccggccacagacgatgaacgaaccattgctgaaggctctcggggtgccgca
ccttccacgagcactcctgccgagggcaagaacgccagttcagagaaggatcgcgagcga
ccatcggcacacgaggagtcctcgcagtcccgcactaaagaccctcgagcagagaggagg
atacgcaacaaggatcggccatctattgagatataccggcctgggatgcgaaggctatcg
caaaaggccacatcagctcaagaggaatctccatctgccggcacaaaaccatcaaaaagc
gccaacagtagtagcaagccaccaacttga
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