Rhipicephalus sanguineus (brown dog tick): 119388199
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Entry
119388199 CDS
T07382
Name
(RefSeq) aladin
KO
K14320
aladin
Organism
rsan
Rhipicephalus sanguineus (brown dog tick)
Pathway
rsan03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rsan00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119388199
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsan03019
]
119388199
Messenger RNA biogenesis [BR:
rsan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119388199
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
eIF2A
Beta-prop_CAF1B_HIR1
Beta-prop_IFT122_1st
WDCP
Beta-prop_EIPR1
Motif
Other DBs
NCBI-GeneID:
119388199
NCBI-ProteinID:
XP_037511787
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Position
3:209554669..209597911
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AA seq
521 aa
AA seq
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MCSLSSFPRPPPRGLITLFEKDGDLHEGNEREWKELAERFSAYPRVSIVRETTRHPAFAE
SAAGAFLQQPESIWKQAFVSWQEKGFIGFLEQLSTYNESSIVLSLARFAAKSILFGTRWF
YKQGLLFPHLLLSSEDMCKEFSLTLNWMRGHVRAFAWHPQCPKFAVASHGDMIRVYAPNM
SITPVLKHRSQRNITDMAWKPYSSAVLAVACQEGVLLWQVEPTSLIARPSSAYASLLSRE
GHNPVSSIAWHPKGTLLASASAADCSLLIWNVAMEECVPLTHISGGGVSLIRWSPDGCRL
LAASPQSLFRVWHTNQWQFDKWSTQQGRCRAACWSPDGRWLLCSFSDKPHLYALSFPPPV
AASVDEGEGKSSTWSPHPDATFGTGLPVADLTEVDLPLHSDAGEGIRVGGLVQNMAWDKH
GERLAISFRDHSEYVALFRTKTSPVFQMFPCGFVSGPPGESAQLISFYNGFEGGSLLTVC
WSNGLVSHVPLCYCPISPCDSSDTAASLPFTPLRPPHLYST
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgtgctcgttatcgtcatttcctcgaccgccaccgagaggtctcatcaccctcttcgag
aaggacggcgacttgcacgaaggaaatgaacgtgaatggaaagaactcgcggaacgattt
tcagcatatccacgtgtatccatagtccgggagaccacaagacaccccgcttttgcagaa
agtgctgctggtgctttccttcaacaacctgaatccatttggaaacaagcctttgtgtca
tggcaagagaaaggattcattggcttcttggaacagttatcaacatacaatgagtcatcc
attgttttatctttagcacgatttgctgcaaaaagtattctgttcggcacaagatggttt
tacaagcagggactgttgttcccacatctgcttctgtccagtgaagatatgtgcaaggag
ttttcattgacattgaactggatgaggggccacgtacgagcttttgcctggcatccccag
tgccccaagtttgctgtggcatcacatggcgacatgattcgtgtgtatgcacccaacatg
agcattacacccgtgctgaagcacaggtctcagagaaatatcaccgacatggcttggaag
ccttacagctctgcagttctcgctgtggcttgccaggagggagtccttctttggcaagtg
gaaccgacatctcttattgcaagaccatcatcagcatatgcatcactcctttctcgtgag
gggcacaacccagtcagcagcattgcatggcatcctaagggaacactcctagcatcagct
tctgcagctgactgctcacttcttatttggaatgttgcaatggaagagtgcgttccattg
acacatatatctggtggaggagtctctcttattcgatggtcgcctgatggctgtcgactc
cttgcagcgtcaccacagagtctcttcagggtatggcatacaaaccagtggcagtttgac
aagtggtcaactcagcagggccgctgccgggcggcctgctggagccccgatggccgctgg
ctgctgtgcagcttttccgacaagcctcacctgtacgcgctgagcttcccacctccagtt
gcagcctctgtcgacgagggtgaaggcaagtcgtccacttggtccccacacccagacgct
acctttgggacaggcttacccgtcgctgacctcactgaggtagacttaccactgcactcc
gatgctggcgaaggaatcagggtcggaggacttgtgcagaatatggcctgggacaagcat
ggagagcgcttggccatttcttttagagatcacagcgagtacgttgctctgtttaggacc
aagacctcccctgtctttcaaatgttcccatgcggctttgtatctggtccccccggtgag
tcggctcagctgataagcttctacaatggctttgaaggtggctcactgcttactgtgtgc
tggagcaatggactggtgagtcacgtgccactctgttactgccccatctcgccttgcgac
tcatcagacacagcagccagccttccctttacaccgctcaggccaccgcatttgtacagc
acgtga
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