Rhipicephalus sanguineus (brown dog tick): 119388382
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Entry
119388382 CDS
T07382
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear cap-binding protein subunit 1-like
KO
K12882
nuclear cap-binding protein subunit 1
Organism
rsan
Rhipicephalus sanguineus (brown dog tick)
Pathway
rsan03013
Nucleocytoplasmic transport
rsan03015
mRNA surveillance pathway
rsan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rsan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119388382
09122 Translation
03013 Nucleocytoplasmic transport
119388382
03015 mRNA surveillance pathway
119388382
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsan03019
]
119388382
03041 Spliceosome [BR:
rsan03041
]
119388382
Messenger RNA biogenesis [BR:
rsan03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
119388382
Spliceosome [BR:
rsan03041
]
Common components
Common spliceosomal components
Cap binding complex
119388382
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
WIT1_2_N
TMF_TATA_bd
Topoisom_bac
Motif
Other DBs
NCBI-GeneID:
119388382
NCBI-ProteinID:
XP_049269889
LinkDB
All DBs
Position
3:complement(231417900..231459811)
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AA seq
782 aa
AA seq
DB search
MSRRRAYEDDDDDDFRVRKRRRVSSEPREIEDRLKSLIERVGEKSTSSLESNLEGLAGVL
DADLPSYKGNILNILVECAIFMPEKTTIYTTLIGLLNARNYNFGGELVELLVKNYKERLK
DCKFEDARIIVRVFADLVNCHVISVGSVVSLFESMLEVTLEENIPQVRSDWYVYAVLTAL
PWVGRELYEKKDQELDRLMRHIDDYISKRQKRHAPALRVWQAEAPHAQEEGLDCLWAQVS
KLRSEKWVERHLVRPYLAFDGVLCEALQHNLPSLPPPPHQPHYIYPFPMVVFRLFDYTDC
PEGPVLPGSHSIERFLGEEQLRHILERNYADRKVCAAQLLSFQGKLKVPLEYMIVEVIFG
ELLRLPTSRQLEICYGSLLLELCKLQPSSLPQVLAQAVELLYEQLDTMNTDCLDRFCSWF
AYHLSNFQFRWTWDDWADAVSLDPLHPKAVFLQQALHRCLRLSYHQRVVELVPASFAPFL
PAKPVPDYRFEKEGADGLPGAPVAARLSSCIRNKCTPEEALEVLAELPNPLQEDEGMEPA
HNPLKIQVFVETLLYIASKSFSHSFAGIAKFHYVFKTLASTEEAQICVLRSTYDLWHNHQ
QMMIGLVDKYLKTQIVECSAVANWVFSKDLAPDFMRPYVWEILHLTIRKMIKHVRKLELE
LEDAKNKLSKGDSGDKDHPTEEMVERMEEKLEATQSDLKNLFLIIFQRFIMTLTEHIGQC
EVEGTNFQTYWFRWTLGRLQEVFFQHHEHVFKYVTTLESLLFTSDIDPHVLEVFQQFAAL
RA
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgagccgaagaagagcgtacgaagacgacgacgacgatgatttccgcgtgcgcaagcgg
cggagggtcagttcggagcccagagaaatagaggatcggttgaagtctttgatagaaaga
gtcggtgagaagagcacatcatcgcttgaaagcaacctagaaggattggctggtgtgttg
gatgcagatctcccaagttacaaaggaaacatattaaatatcttggtggaatgtgccatt
ttcatgccagagaagacaaccatctacacaacgctcattggcctgctcaatgcacgtaat
tacaacttcggtggtgagcttgtggagctcttggtgaaaaattacaaggagcggctcaaa
gattgcaagtttgaagatgcaaggatcatcgtgcgagtctttgcggaccttgtcaactgc
cacgtcatttcagtcggctcagtggtcagcctctttgaaagcatgctggaggtcaccctt
gaggaaaatataccacaggttcgctctgactggtatgtctatgctgtcctcactgcattg
ccttgggtggggcgagagctttacgaaaaaaaggaccaggaattggaccggctgatgcgt
cacattgacgactacatcagcaagcggcagaagaggcatgctccagccttgcgtgtttgg
caggctgaagcccctcatgcccaggaggaggggctcgactgcctctgggcgcaagtgtca
aagctgcgctctgagaagtgggtagaacggcacctggtgcgtccctacctagcctttgac
ggcgtcctgtgtgaggccctccagcacaacctgcccagcctgcccccaccgccacaccag
ccgcactacatctatcccttccccatggtggtgttccggctctttgactacaccgactgt
cccgagggtcctgtgttgccaggctcccattcaattgaacgtttcctgggcgaagagcag
ctacgtcacatccttgaacgcaactacgcagatcgcaaagtctgtgctgcacagctgctg
agcttccaaggcaagcttaaggtgcctctggagtacatgatcgttgaggtgatctttggc
gagctgctgcggctacctacctccaggcaattggagatttgctatggttcgcttctgttg
gagctgtgcaagctgcagcccagcagcttgccccaagtccttgcacaagctgtcgagctt
ctctacgagcaattggacaccatgaacactgactgtttagacaggttctgcagctggttt
gcctatcacctgagcaatttccagtttcgatggacgtgggacgactgggctgatgccgtc
tccttggatcccctccatcccaaggctgttttcttgcaacaagcgttacatcgttgcctc
aggttgtcctatcaccagcgagtggtggaacttgtgccggcctcgtttgccccctttttg
cctgcaaagccagttcctgactaccgttttgagaaggagggagcagacggcctgcccgga
gcacctgttgcagctcggctgagcagctgcatccgcaacaagtgcacacctgaggaggcc
ctcgaggttctggctgagttacccaaccctctgcaggaggacgaaggcatggagcctgca
cacaatcccctaaaaatccaagtctttgtggagaccttgttgtacattgcaagcaaatcc
ttctcgcactcgtttgcaggcattgccaaatttcactatgtgttcaagacattggcatct
acagaggaggctcaaatatgtgttttgcgtagtacttatgatctctggcacaaccaccaa
cagatgatgattggccttgtcgacaagtacttgaagacgcaaattgtggaatgttctgcc
gtggctaactgggtcttctccaaagatctcgcgcccgacttcatgaggccttatgtttgg
gagatcctacacctcaccatacgaaagatgatcaagcatgtcagaaagttggagttagaa
ctggaggacgccaagaacaagctcagcaagggtgactcaggcgacaaagaccatcccaca
gaggagatggtcgagaggatggaggagaagctagaagccactcaaagtgacctcaagaac
ctctttctcatcatatttcagaggttcatcatgacattgaccgagcacattggccagtgt
gaggtggaaggcacaaacttccagacctactggtttcggtggacgctgggtcgcctgcaa
gaagtattttttcagcaccatgaacatgtcttcaagtatgtgaccacattggaatcactt
ttgttcaccagcgacatcgaccctcatgtgctggaagtgttccagcagtttgcagcatta
cgtgcatga
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