Rhipicephalus sanguineus (brown dog tick): 119389487
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Entry
119389487 CDS
T07382
Name
(RefSeq) nucleoporin 88
KO
K14318
nuclear pore complex protein Nup88
Organism
rsan
Rhipicephalus sanguineus (brown dog tick)
Pathway
rsan03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rsan00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119389487
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsan03019
]
119389487
Messenger RNA biogenesis [BR:
rsan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119389487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup88
Lig_chan
DUF1664
Motif
Other DBs
NCBI-GeneID:
119389487
NCBI-ProteinID:
XP_037512704
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All DBs
Position
4:complement(16310764..16323153)
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AA seq
672 aa
AA seq
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MAASWKGPAGDNSFLHKLSLHGDKYCSSIHTRMLIAAYDDYIVAWSQDQQRLFAVSAKAF
SSTAEPDDCLELLLSNPPAYDVDNVLVSCTKHLLLSGPHGITVVSLPKTPATLVKERKTS
CKSWTLGEHFFLCHKSVSLVDIAWHPDSESGLHVLALTSDNNLRLYDIVEPQSAQLVLPV
GVNHSLSGTLSASVGDAAVSFDFGDLPAEGKARQVFVLGGSGDIYLTHVSPQDDNRSHLR
PVFGPLSMQPQAEDNYGVDGFSIICLPGAVPVLAIATTGGTLYHCLALGTRNFSNGTREE
CEDVSLYVFEKIRLDLTFSLSTAEEEIFSCPIRLHKDPTNHQRYICVHNAGVHAVAVPFI
DHLQAFAEDDTGMQMVSQLHTEMSIVESLLCTRALASSKPAPPVGVVVLPEHPGPLLIVL
TASWKIVTMMLMQGYQSYLPALLSQSQQDTPLQSMHGTSSSSSLVAHVKQLLEGRSLPTL
SQAAEDCTPQQSLELLLTATQRIREQWLQKLEACQLLIARRVQAAHDQRDLQLEKLSVLL
EELALLQQRDRALKTRYEALYSTQQKLVKRVEDVLHQLQRQVPVLSAAEQAMTEELKAIQ
EQLKVFKESLEQAQAKQRYQQQSHRDQQASRTSGQYQRRNLMPNQVEQIAKALKQEGDII
SELVQRVTALMD
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggcggcatcgtggaagggtcccgccggggacaattcgtttttacacaagttatcgctg
catggcgacaagtactgttcgtctattcacaccagaatgcttatcgctgcttacgatgat
tatattgtcgcttggagccaggaccagcaacggttgtttgctgtcagcgcaaaagcattt
tcaagcacggctgaaccagatgactgcctggagctgttgctgtctaacccaccagcgtac
gatgttgacaacgttctcgtcagttgtaccaagcacctgctgctctctgggccgcatggc
ataaccgttgtatcgctgccgaaaacgccagccactttggtgaaggagaggaagacttca
tgcaaatcatggacgcttggtgaacacttcttcctgtgccacaagtccgtttcactcgtc
gacatcgcctggcatcccgacagcgagtctggcctccatgtcctcgcactgacgagtgac
aacaatctgaggctttatgacattgtggaaccacagtctgctcagctggtgctgccagtt
ggtgttaatcacagcctcagtggtacactcagtgcctccgtcggagatgctgcagtcagc
ttcgactttggggacctccctgctgaaggaaaagctcggcaggtctttgtacttggtggt
agcggagacatctacctgacccacgtttcaccacaagatgacaacaggtcacacctgcgg
cctgtgtttggtccactgagcatgcagcctcaagcagaggacaactacggcgttgacggc
ttttccattatctgtttgccaggtgccgtcccagtgttggcgattgccactactgggggc
acactttaccactgtcttgctcttggaacacgcaatttttctaatggcaccagggaagag
tgtgaggatgtctctttgtacgtgtttgagaaaatcaggctcgatttgaccttttcattg
tccactgctgaggaagaaatattttcttgcccaattcgacttcacaaagaccccaccaac
catcaacgatatatctgtgtccacaatgctggtgtacatgctgtggctgtaccctttatt
gaccatctgcaagcatttgctgaggacgacacaggcatgcagatggtgtcccagctgcac
actgaaatgtccatagtagagagcctcttatgcactcgtgccttggccagcagcaagcct
gcacctcctgttggtgtagttgtgttaccggaacacccaggaccactgctgattgttctc
actgcttcctggaagatagtcaccatgatgcttatgcagggttaccagagctacttgcca
gcactgctctcccaaagccagcaggacacaccactgcagagcatgcacggcactagcagc
agcagcagtctggtggcccatgtaaaacagctgctggaaggccgtagcctccctacactt
tcgcaggcagcggaagattgcacacctcagcagagcctcgaacttctactgactgccacg
cagcgcatccgtgagcagtggctccagaagcttgaggcttgccagctactcattgcacga
agagttcaggctgctcatgaccaaagggatctgcagctggagaagctgagtgttctactt
gaagaacttgcactgcttcagcaacgtgacagagcactgaaaaccagatatgaagccctg
tactccacacagcagaagcttgtcaaaagggttgaagatgtgttgcatcagctgcagcgc
caggtacccgtgctttctgcagctgaacaagcgatgacagaggagctgaaggccattcaa
gaacagctcaaagtgtttaaggaatcgctggagcaagctcaggccaagcaaagataccaa
cagcagagccatagggatcagcaggccagcagaacttccggccaataccagcgaaggaac
ctaatgcccaaccaagtagagcaaattgccaaggccctcaaacaggagggtgacataata
tccgagcttgtgcagcgagtcacggccttgatggactaa
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