KEGG   Rhipicephalus sanguineus (brown dog tick): 119389602
Entry
119389602         CDS       T07382                                 
Name
(RefSeq) LOW QUALITY PROTEIN: cleavage stimulation factor subunit 1-like
  KO
K14406  cleavage stimulation factor subunit 1
Organism
rsan  Rhipicephalus sanguineus (brown dog tick)
Pathway
rsan03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:rsan00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    119389602
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rsan03019]
    119389602
Messenger RNA biogenesis [BR:rsan03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     119389602
SSDB
Motif
Pfam: WD40 Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WDR55 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_Gbeta ANAPC4_WD40 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st EIF3I Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_EML NBCH_WD40 Beta-prop_Aladin Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st Beta-prop_VPS8 WD40_RFWD3 Beta-prop_IFT140_1st WDR90_beta-prop_4th CSTF1_dimer Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_NUP159_NUP214 eIF2A Beta-prop_SPT8 Beta-prop_WDR19_1st Cytochrom_D1 VID27 PROPPIN Beta-prop_DCAF12 Beta-prop_NWD2_C
Other DBs
NCBI-GeneID: 119389602
NCBI-ProteinID: XP_037512876
LinkDB
Position
4:complement(22922814..22945777)
AA seq 396 aa
MVKAHPACPPSDRLLNIVSAGLRVEQESKGSKVSNADQPYMGPGIDLEYETEAASLAPEP
ALYETCYVTSHKAQCRAGTFSRDGQLVATGSADASIKILDVDRMLAKSAMPPEVAAQESA
QQNMETHPVIRTLYDHIEEVTCLEFHPREQILASGSRDYTVKFFDYSKPSVKRAFKTVHE
AEMVRSLAFHPSGDFILVGTQHPTLRLYDVNTAQCFVSSIPSDQHKGPINALRYNNSGKL
YVSASKDGDLKLWDGVSNKCVCTFPQAHDGNEVCSVVFSRNGKYVLSSGKDSIVKLWELS
MSRCLIAYTGAGATGKQAHRAQGIFNHTEDYVLFPDEKTTSLCSWDSRNAERQRLLSLGH
NNTVRHLVHSPTGPAFLTCSDDFRARFWYRRVEAVD
NT seq 1191 nt   +upstreamnt  +downstreamnt
atggtgaaagcgcaccctgcgtgccccccgtccgacagattgctgaacatagtcagtgct
ggcctacgagttgaacaagagtcaaagggcagcaaggtctcaaatgcagaccagccctac
atgggacctggaattgacttggagtacgaaacagaagctgcctccctcgcacctgagccc
gcgttgtacgaaacctgttacgtcacatcccacaaggcgcagtgcagagcgggaacgttc
agccgtgatggacagctcgttgcaaccggctcggccgatgcttcgattaagatcctcgac
gtggaccgtatgcttgcgaagagtgccatgccccccgaagtggcagcacaggagtcggcc
cagcagaacatggagacgcacccagtcattcgcaccctctatgaccacattgaggaggtg
acatgcctcgagtttcacccacgggagcaaatcctggcatctggtagcagggactacacc
gtcaaattctttgactactcaaagccatctgtgaagcgagccttcaagacagttcatgag
gcggagatggtgcgatccctagcgttccacccgtccggtgacttcatattggtgggaacc
cagcatcccaccctacggctctatgacgtcaacacagcccagtgtttcgtgtcaagcatt
ccttcggatcagcacaagggtcccataaatgcgcttcgttacaacaactccggcaagctg
tacgtgtcagcttccaaggacggcgacctgaagctctgggacggtgtgagcaacaagtgc
gtctgcacatttccccaggcccacgacggcaacgaggtctgctccgtggtcttctctcgc
aacgggaaatacgtcctgtcgagtggaaaagattccatcgttaagctgtgggagctgtct
atgtcccggtgcctcattgcttacacaggagcaggagctacgggaaagcaagctcacagg
gctcagggtatcttcaaccacacggaggactatgttctcttccccgacgagaagactacc
agcttgtgcagctgggactcgagaaatgctgaacggcagcgtttgctctccttgggccac
aacaacacagtccgtcatttggtccactctccaaccggcccggcttttctgacgtgcagc
gatgatttcagggctcgtttctggtatcgccgtgtggaggctgtggactga

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