KEGG   Rhipicephalus sanguineus (brown dog tick): 119389632
Entry
119389632         CDS       T07382                                 
Name
(RefSeq) roquin-1
  KO
K15690  RING finger and CCCH-type zinc finger domain-containing protein
Organism
rsan  Rhipicephalus sanguineus (brown dog tick)
Brite
KEGG Orthology (KO) [BR:rsan00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rsan03000]
    119389632
   04121 Ubiquitin system [BR:rsan04121]
    119389632
Transcription factors [BR:rsan03000]
 Eukaryotic type
  Zinc finger
   Cys3His zinc factors
    119389632
Ubiquitin system [BR:rsan04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    119389632
SSDB
Motif
Pfam: Roquin_1_2-like_ROQ ROQ_II zf-CCCH zf-CCCH_UNK zf-CCCH_4 zf_CCCH_4 PaaA_PaaC Vesi_VP2
Other DBs
NCBI-GeneID: 119389632
NCBI-ProteinID: XP_049268014
LinkDB
Position
1:complement(15881302..16146060)
AA seq 817 aa
MPVQAPPPHSWGSVAAAAAPNACCCCRGRAPPPEGGCHAPQCRALQQQQPQQRCHLPENG
LPPHLHLVSAPPPPPVAAAVAAGASVIPAVVPAGAPAVPEESAEQVVARCVHEMALFLRP
AAQGGCWLSRPLQRKLVSLVHCSLSEPEGRARAARAARSLGERCALELLLQHHQHHQAGA
GAGGGGQQLSAALWAAVRARGCQFLGPHMQEEVLRLVLLALEDGSPLSRKVLVLFVVQRL
APHFPQASKTSIGHVVQLLYRASCFKVSKREGDSSLMQLKEEFCTYEALRREHDAQIVQI
ASEAGLRIAPEQWSSLLYGDAAHRSHMQSLVDKLQSPQSFAQSVHELSLALQRTGDPAGL
AALRPHFDLLAHWEPPPDGGAPTWEELSRCALAARACLQGLVAFMGAFGGRRGGGGSSSP
GRGRAEAGGGSPSHNPGGSRYKTSLCRDVAQRGSCPRGAHCTFAHSQEEMDRKPPCVRQN
RYRKVFTAKKHRAPVQNSPPSERYRARRPPRTSVDMPKPSVGNESRPASARRKQQNLSID
ANKSMAFEFNFWHFMNHADPGIREAGRSPDHRLASCPPVAVSLCESPPLSRRLDPGPPSV
SVGLNPESPAFHPDEPWRNPSPPCRPFFFLSQDDDDDWGSSHGSCDSSTSSHHPTRPCPS
EEDPLVPFDPPLVSKYGPISRCARTLVRGPAPIQVTSRQPQELTSPTAALRLPLASAAAA
PSLYAQGFALLPTDLACGALADPPPPLLFPFKGTPPFTPPTGALLAAPPALVTPPTKGSE
SWAGQPQVPTSVGPWLLNQLEESAQLCSDNCWTHQGH
NT seq 2454 nt   +upstreamnt  +downstreamnt
atgcctgtgcaggctccgccccctcactcgtggggcagcgtggctgcagccgcagccccc
aatgcctgctgttgctgccgtggccgtgctccaccgcccgaagggggatgtcacgcaccc
cagtgccgcgccctccaacagcagcagccacagcagaggtgccacctgcctgagaatggg
cttcccccgcaccttcaccttgtctctgcgccccctcctccacccgtggcggcagcagtg
gcagctggtgcctcggtgattccagcagttgtgcctgctggtgcccctgcagttccagag
gagagtgccgagcaagtggtcgcacgatgtgtccacgagatggcactctttctcaggcct
gctgctcagggtgggtgttggttgagccggcccttgcagcgcaagttggtctccctggtg
cactgctcgctgtccgagccagaggggcgggcccgtgcggcccgtgcagcacgctcgctg
ggcgagcgctgtgccctcgagctcctcctgcagcaccaccagcaccaccaggccggggcc
ggagcgggtggagggggccaacagctgagcgctgccctgtgggcagccgtccgtgcccgt
ggctgtcagtttctggggccccacatgcaggaggaagtgttgaggctggtcctccttgcc
ctcgaggatgggtcacccctgtcccgcaaggtgttggtgctgtttgtggttcagcgcctg
gcaccccatttcccccaggcatcaaagaccagcattggccatgtggtgcagctgctctac
agggcatcttgtttcaaggtgtccaagcgagaaggtgactcgtcgctgatgcaactcaag
gaagagttttgcacgtacgaggctctgcggagagagcatgacgcgcagattgtccagatt
gccagtgaggcaggcctgcggatcgcacccgagcagtggtcctcgcttctctatggggat
gcggcccaccggtcacacatgcagtcgctggtcgacaaactgcagagcccacagtcgttt
gcccagagcgttcacgagctgtcgcttgcgttgcaacggacaggcgaccctgcgggactg
gctgcgctgcggccgcactttgatctcctggcccattgggagccaccgccagacgggggt
gcaccgacgtgggaggaactgagccggtgtgcgctggccgcccgtgcctgccttcaagga
ctggtggccttcatgggggcctttgggggtcggcgagggggcggaggatcctcttcgccc
gggaggggcagggccgaggcaggtggtggcagccccagtcacaacccgggggggtcccgc
tacaagacgagcctgtgccgcgatgtggcccagcgtggctcgtgcccccggggggcccac
tgcacctttgctcactcccaggaggagatggacagaaaaccaccttgtgtccgacaaaac
cggtacagaaaagtcttcaccgcgaaaaagcacagggcacctgtgcagaattcgccgcca
tccgaaaggtaccgtgcaaggcggcctccaaggacatctgtagatatgcccaagcctagt
gtcggtaatgaatcccggcctgccagtgctaggcgcaagcaacagaatctttcaattgat
gcaaacaaaagcatggccttcgagtttaacttctggcatttcatgaatcatgctgaccca
gggatccgcgaagcaggccgaagccccgaccaccggctggcgtcctgtcccccagtggct
gtcagtctgtgcgagtcgcctcctctgtcccgacgtttggatcccgggccaccatccgtc
tcggtcggcctcaatcccgaaagcccagccttccaccctgacgagccctggcgcaacccc
tctccaccatgccggcctttcttcttcttgtctcaggatgatgacgatgactggggctcc
agccatgggtcctgtgacagctctacctcgagccatcatccaactagaccttgcccatct
gaggaggaccccctggtgccctttgaccctcccctggtctctaaatatggccccatctcc
cgctgtgcacgaaccctcgtcagagggcctgcccccatccaggtgacgtcccggcaaccc
caggagctgacaagccccactgctgccttgcgtttgcccttggcatctgctgcagctgcc
ccttcgctctacgcacagggttttgccctcctcccgactgacctggcctgtggagctttg
gccgatcctcccccaccactgctgttccctttcaaggggacaccccctttcaccccccct
acgggagccctgctggccgctccgccggcacttgtcacacccccgacaaagggaagcgag
tcctgggcggggcagccccaggtgccgacgtcagtgggtccctggctcctgaaccagctg
gaagagtcggcacagttgtgctccgacaactgctggacccaccaaggacattag

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