Rhipicephalus sanguineus (brown dog tick): 119389948
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Entry
119389948 CDS
T07382
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
rsan
Rhipicephalus sanguineus (brown dog tick)
Pathway
rsan03030
DNA replication
rsan03420
Nucleotide excision repair
rsan03430
Mismatch repair
rsan03440
Homologous recombination
rsan03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rsan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
119389948
03420 Nucleotide excision repair
119389948
03430 Mismatch repair
119389948
03440 Homologous recombination
119389948
03460 Fanconi anemia pathway
119389948
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsan03000
]
119389948
03032 DNA replication proteins [BR:
rsan03032
]
119389948
03400 DNA repair and recombination proteins [BR:
rsan03400
]
119389948
Transcription factors [BR:
rsan03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
119389948
DNA replication proteins [BR:
rsan03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
119389948
DNA repair and recombination proteins [BR:
rsan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
119389948
MMR (mismatch excision repair)
119389948
DSBR (double strand breaks repair)
HR (homologous recombination)
119389948
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
RADX
Motif
Other DBs
NCBI-GeneID:
119389948
NCBI-ProteinID:
XP_037513335
LinkDB
All DBs
Position
4:complement(50277497..50294361)
Genome browser
AA seq
603 aa
AA seq
DB search
MENRLTAGAVERILNNQQVDKPVLQVLNFKPISSNTADRYRLLLSDGVQCHTYAMLGTQL
NGMINNNEIDKFAVVQLDKYMCNVVSPDKKVLIVLDLTVVAKGSTVGCRLGSPVIPTSSS
SGAAQPTDGGASKPPFQPNGGNAPPSAAPSFGNRAYPASTSDVVVVPIASLTPYQNRWTI
RARITNKSNIRTWSNSKGEGKLFSMDLLDESGEMRATAFNAECDRFYDVIEVNKVYYISR
AVIKNVKKGYSFSSIKNDFEMSLIPETTITPCDDVTPNIPTLQFNFVPIARLQEVSKDSV
IDVIGVCKSAGDVQTVTRRTTNQELKKRDVNLVDRSGTEVSLTLWGDQAEKFDGSDNPVV
AVKGARVSDFSGVSLSLISSSMLQVNPDIPESHALMGWYSREGTLLQTRSLSTQRGGPMG
GNSNWKSIAQAKAEGLGQGDKPDYYSVKACVSIIRKENCLYKACPSENCNKKVVDLQTGY
YRCEKCAQETMEFKWRLLVSANLTDFSDGQWVTCFGKEAETLIGASAEDLGEMYSNSSKE
DSRYEDILNDVPFKPFIFRLRTKMEVYNDESRLKTSVMSVSPVDYVEYTKKLLKDIAELQ
KNL
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggagaaccgcctgactgctggcgcggtagagcgtattctcaataatcagcaagttgac
aagcccgtactgcaagttttgaacttcaaacccattagcagcaacacagccgataggtac
cggctgctgctgtcggatggagtgcagtgccacacatatgccatgctgggcacgcagctc
aacggcatgatcaacaacaacgagattgacaaatttgctgtggtgcagttggacaagtat
atgtgcaacgttgtcagtcctgacaagaaagttctgattgtgttggacttgactgtggta
gccaaagggtcaacagtgggctgcaggctggggagccctgtaataccaacgtcgtcctcc
tctggtgctgcccagcctacagatggaggagccagcaagccaccgttccagccgaatgga
ggaaatgctccaccttcagcagcaccatcatttggaaatcgagcgtaccccgcttctacc
agtgatgtcgtagttgtccccattgccagccttacaccatatcagaacaggtggaccatc
agagcgcgcatcacaaacaagtccaacattcgtacgtggagcaactccaagggtgaaggg
aagctcttttcaatggaccttctggatgagagtggggagatgcgtgccacggccttcaat
gcggaatgtgaccgcttctacgacgttattgaagtgaacaaggtgtactacatttcaaga
gccgttatcaagaacgtcaaaaaaggctactcgttttcgtctatcaagaacgacttcgag
atgtcactcattccagagacaactattacaccatgcgatgacgttactccaaacatccct
acactgcagttcaactttgtgcccattgcgcgtcttcaggaagtaagcaaggacagtgtc
attgatgtcattggagtctgcaagtcggcaggtgacgtacagacagtgacacgtcgcacc
accaatcaggagctcaagaagcgggatgtaaacctggtggatcgaagcggcactgaggtg
tccctcacactttggggagatcaggcagaaaagtttgacggctctgacaaccctgtcgtg
gctgttaagggagcacgtgtatctgacttcagcggtgtatccctctccctgatcagctca
agcatgctgcaagtgaacccagacattccagagtcccatgccctgatgggttggtatagc
agagagggaacactcctgcagacacgctccctttccacacagagaggcggaccaatggga
ggcaactcaaactggaagtcgatagcgcaggcgaaggcagaaggtctgggccaaggcgac
aaaccggactactacagcgttaaggcatgcgtgtcaatcatccgcaaggagaattgcctc
tacaaggcctgtccaagtgagaattgcaacaagaaggtggtcgacctgcagactggatat
taccgctgtgaaaagtgtgcccaggagaccatggaattcaagtggaggcttctcgtctcg
gcaaatttgacagacttcagtgatggccagtgggtaacctgttttggcaaggaggctgag
acacttattggggcttctgcagaggacttgggcgagatgtactcaaattccagcaaggag
gacagtagatacgaagacatccttaatgatgtccccttcaagcctttcatcttccggctt
cgcaccaaaatggaggtctacaatgatgaaagccggttgaagacttccgtgatgtccgtt
tccccggtcgactatgttgaatatacaaaaaagctgctcaaggacattgctgaactgcag
aaaaacttgtga
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