Rhipicephalus sanguineus (brown dog tick): 119389976
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Entry
119389976 CDS
T07382
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
rsan
Rhipicephalus sanguineus (brown dog tick)
Pathway
rsan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rsan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119389976
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsan03019
]
119389976
03012 Translation factors [BR:
rsan03012
]
119389976
Enzymes [BR:
rsan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
119389976
Messenger RNA biogenesis [BR:
rsan03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
119389976
Translation factors [BR:
rsan03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
119389976
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_C
HA2_N
nSTAND3
AAA_19
AAA_22
ATPase
ResIII
AAA_16
AAA_23
PhoH
T2SSE
NACHT
TsaE
Motif
Other DBs
NCBI-GeneID:
119389976
NCBI-ProteinID:
XP_049270561
LinkDB
All DBs
Position
4:51317857..51359256
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AA seq
947 aa
AA seq
DB search
MAPVNMSFHERRGGRHGRGSGRGSGSNRGGPGRGKRPSHIPEGLRGKEIGLYFARRGRAR
KAWAATHQKVAVSIDYQSQQELQHLIRCINLEEGPSHERLESINTVAVDYLSNASSSFDP
KDDVVKLKIERDTALDERLRQGMQAKVQSREYQSMLDFRKQLPAYTMREEIIEVIERNRV
VVISGETGSGKTTQVPQFILDSYIEKGLGSLCKIICTQPRRISAISVAERVAAERAERCG
ESAGYQIRLECRAPRDRGSILFCTTGILLQQLQSDPYILAASHVILDEVHERDLQTDFLS
IILKDLLAVRPDLRVILMSATINADLFSEYFGNCPRLEIPGIAFPVDVIYLEDILEHTGY
RGNSLFDGTSAVRRKDRRKFEDSIEDVMPFIRSLEGKYSNKTLGTLSEWNEMRIDMDLVH
ALISEICAKKPEGAILVFLPGWEQINDLNKLLTADRNLKSSLIIPLHSMMPTVNQRQVFE
RPPAGVRKIVLATNIAETSITINDVVYVIDCGKIKMTNFDVDKNLATLNAEWVSRANAQQ
RKGRAGRVQPGVCYRLYTTWRESQLEAYQLPEMLRTRLETLILKIKILKLGSAEAFLQKA
INPPSSEALHLSLQFLITLATLNEDETLTPLGYHLAKLPLDPQTGKMIIMASIFSCLDPI
LTVAASLSFKDAFMVPLGKEKLVDKVKKQFAGDSKSDHIMLVNVFSQWEEAVKHRNGNDF
CYANFLSWNTLKMLSNMRQQFAEYLQELNFINSKNIKAREFNQNSDNLKVLQAVICAGLY
PNVAKGIFARSKRLMRCSTKTDAKTSLHPKSVNVGAAGFDTQWFVYYTKIRSTRTYLHDI
TPVYPIPLLLFGGFFRHSGDTITLDDWITIHCDYNLAKLVQDLRQEFDRILEKKITAPGL
KAGTMSSNQRRLLAAIIQVLSQETTDVPEVPDSFDDDDTDVPGIDET
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctgtaaatatgtcatttcatgagaggcgtggaggacggcatggcaggggatcg
ggcagagggtcaggatcaaacagaggtggaccaggcaggggcaagcgaccctcccacatt
cccgaaggcctgagaggaaaggaaattggcctttactttgctcgcagaggacgcgcccgc
aaagcatgggcagctactcaccagaaggttgccgtgtcaattgattatcaaagtcagcaa
gagctacagcacctcattcgctgcattaacctggaagaaggcccaagccatgagcgactt
gagtcgatcaacacagtggcggtggactacctgtcaaacgcctcgtcatcctttgatcca
aaggacgatgttgtcaaactgaaaatagagcgtgacactgccctggatgaaaggcttcgc
caaggcatgcaagcaaaggtgcagtcgcgggaataccaaagcatgcttgacttcaggaag
caactgcctgcctacacaatgagagaggaaataattgaagtaattgagagaaatcgggtc
gtggtcatcagcggtgaaactggatccggaaaaactactcaggtcccacagtttattctg
gactcgtacattgagaaaggcttggggtcactctgtaaaatcatctgcactcaaccgcgc
cgtatcagcgcaatctctgtggcagagcgggtggcagccgagcgagcagagcggtgcggt
gaatcggctggctatcagatacgactggaatgcagagcacctcgagatcgtggctccatc
ctcttctgcaccacaggaatcctcttgcagcagcttcagagcgacccgtacattctggca
gcgtctcatgtgatactcgacgaagttcacgaacgagacctgcagactgactttctcagc
atcatcctcaaagacttgctcgccgtgaggcctgacctgcgcgtgattctcatgagcgcc
acaatcaacgcagatctattctctgaatattttggtaactgcccacggttagaaatacca
ggcatcgcttttcctgtggacgtcatctacctcgaagatattcttgaacacactgggtac
cgagggaacagcttgtttgatggcactagtgctgttcgaaggaaagacagaagaaagttt
gaggactcaattgaagatgtcatgccatttattaggagcctcgaaggaaagtattcaaac
aaaaccttgggcaccttatcagaatggaatgagatgcgtatagacatggacctggtacat
gcattgatttcagagatctgtgccaagaaacctgaaggagcgatactagtcttcctaccg
ggatgggagcaaatcaacgacttgaacaaacttctgacagctgaccgaaatctgaaaagt
tcactgataattcccttgcactccatgatgccaactgtcaaccagagacaagtgtttgag
aggcctccagctggagtgcgtaaaattgttctggctaccaacatagccgaaacaagcatc
accatcaatgatgttgtgtacgtgatcgactgcggaaaaatcaagatgaccaacttcgat
gtggacaaaaatcttgctaccctgaatgccgagtgggtgtcaagggcgaatgctcaacag
cgcaaaggacgagcagggagagtgcagcccggcgtgtgctaccggctgtacactacctgg
agagagtctcagctggaggcctaccagctgccagagatgctccggaccaggctggaaaca
ctcattctgaagatcaagatactgaagctcggaagtgcagaagcttttctccaaaaggca
ataaatcctccttcttctgaggcactgcatctttctcttcagtttttgattacactggca
accttgaatgaagatgaaactctgactcctctgggctaccacttggccaagctgcccttg
gatcctcagacgggcaagatgatcatcatggcgtccatcttctcttgcctcgaccccatc
ctcacggtggccgcaagtttgagctttaaggatgcctttatggtgccactgggaaaagag
aagcttgtggataaagtaaagaagcagttcgctggagacagcaagagtgaccacataatg
ctcgtcaacgttttttctcagtgggaagaagcagtgaagcatcgcaatggcaatgatttc
tgctatgcaaatttcctttcgtggaacacactcaagatgctttcgaacatgcgacaacag
tttgccgagtacctgcaggagctgaacttcatcaactcaaagaacatcaaagcccgagag
ttcaaccaaaattctgacaacttgaaagtcttgcaagctgtcatctgtgctggcctgtac
ccaaatgttgctaaaggcatttttgccagaagtaaaagactcatgaggtgctccacaaag
accgatgcaaagacatcactacacccaaagtctgtaaacgttggcgcagcgggctttgac
actcagtggtttgtgtactacaccaaaatccgatctacaaggacgtacctgcacgacatc
actccagtctatcccattccactgctgctctttggaggctttttcaggcacagtggcgac
accatcactcttgatgattggatcaccattcattgcgactataatcttgcaaagctagtc
caggacttgcggcaggagtttgatcgcatcctcgaaaagaaaatcactgcgcctgggctg
aaggccgggaccatgtcgtccaaccagcgacggcttcttgctgccatcatccaagtcctg
tcacaggagaccactgatgtgcccgaggtgcctgattcttttgatgatgatgacacggat
gttccaggcattgatgaaacctag
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