Rhipicephalus sanguineus (brown dog tick): 119389994
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Entry
119389994 CDS
T07382
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
rsan
Rhipicephalus sanguineus (brown dog tick)
Pathway
rsan03030
DNA replication
rsan03410
Base excision repair
rsan03420
Nucleotide excision repair
rsan03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rsan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
119389994
03410 Base excision repair
119389994
03420 Nucleotide excision repair
119389994
03430 Mismatch repair
119389994
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rsan03032
]
119389994
03400 DNA repair and recombination proteins [BR:
rsan03400
]
119389994
DNA replication proteins [BR:
rsan03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
119389994
DNA repair and recombination proteins [BR:
rsan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
119389994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
AAA_22
AAA_14
AAA_30
AAA_5
RCF1-5-like_lid
AAA_16
RNA_helicase
AAA_7
RuvB_N
nSTAND3
AAA_17
AAA_33
Motif
Other DBs
NCBI-GeneID:
119389994
NCBI-ProteinID:
XP_037513420
LinkDB
All DBs
Position
4:52256412..52295389
Genome browser
AA seq
1059 aa
AA seq
DB search
MDIRKFFSATGPAPVKRAAEDTKKQSDEKTKPKQSTKAVKEPAKPKASEKEEKKAAPVEA
SKRERNEPAKPASTKEKKESGKKPRQRIVMLDSDSDDEEPIPKKAKKQAKECKAAAVDSD
EESEEPIVSKKPTDRTQAAVSKDAPPKKPATKVNGKEPPKQKLVPVSADDFFASASISPA
SKLSLKAAQAKKVSTAKESHEDDDFQKTLEKLDEKTEEKKLTIRSSPRKTTKDPESSMAK
KLSPSKGSAAQKPEHSKKPEKEKAAAKHSPEIRRAELPAPASQSSKKPDKKPTPKKESPK
KVPEKTERVTPGKQAAKKEKPAPAKEKVPKEEKPAAATVPAFRRGNAASYQSYLNREGPR
LLGTRDIPEGAPGCLKGVTLVVTGVLECIERDDAKELLERCGAKVTQSVSRNTTYVVAGR
DSGPAKIRKAEECKVEIIDEDALYELIESRSGGDGKRKAKEAEVKEEPEEASTPKKKRKV
DPDDSSEEHWVKGSPRVGESVISPTKKSKDTSTTETPSTSCSQKSWTPAEMWVDKYKPQT
TKQIIGQQGDKSNCGKLLLWLRNWHKSRAGPKKPIPKWGGGGGDGSAFKAALLSGAPGIG
KTTTATLAAREAGYSILEMNASDTRSKKSLAEHVAETLRNRTFTGSGTTSKHVLIMDEVD
GMAGNEDRGGVQEMIALIKSTRIPIICICNDRSHPKMRSLVNYCFDLRFQRPQVKQIQAA
LMSIACKEGLSITPAVVQEIVMASNQDVRQALHNLSLWSSRTKTMSVSQVKADAGKGTKD
IKMGPFEVVRKILSSTEGGQSMTLNEKAALFFHDYNMVPLFVQDNYLHVQPLEAKGDRQK
HLRLVSEAADCISYGDLVERQIRQHGSWSLLPMQAFFSSVIPGELVRGHMREMITFPAWF
GKNSSTTKRHRLLRELKHHTHTRVSADRTQLSMDYVGPLLDSLTRPLIDKGADGVPSVVR
RMHHYYLQRADLDNLCDLALWPGMKDPMANIDSKVKAALTRTLNKEAFMTPYSTEDIVKK
KAKKGAGKSEKLAASQDDEENAEEEEEEAEPDPTLVDYE
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atggatatccgcaagtttttctcggctactgggccggcgcccgtgaagagagccgctgaa
gacaccaaaaagcaatctgacgagaaaaccaagccaaagcagtcgacgaaagcggtgaag
gagcccgctaaaccgaaggcctcggaaaaggaggagaagaaggctgcacccgtggaagct
tcgaagagagaaagaaatgagccggccaagccagcgtcaacgaaggaaaagaaggaatct
gggaaaaagccacggcagaggattgtcatgcttgattcggattcagacgatgaagaaccg
attcccaaaaaggccaagaaacaagccaaggaatgtaaagctgcagctgttgactctgat
gaagagtcggaagaaccaattgtttcgaagaaacctactgatagaacgcaggctgcagtt
tcaaaagacgcacctccgaagaagcctgcaaccaaagtcaatggcaaggaaccgccgaaa
cagaaacttgtgcccgtttctgcggatgactttttcgcaagcgcttccataagtccagcc
tcaaagttgtcactcaaggcggctcaagctaaaaaggtttcgactgcgaaggagtctcat
gaggatgacgatttccaaaaaacactcgaaaaactggatgaaaaaacagaggaaaagaag
ctgaccatacgttcaagtccccggaagaccaccaaggatccagagagctccatggcgaaa
aagttatcgccttctaaaggcagtgcagcacaaaagccagagcacagcaagaaaccggag
aaggaaaaggccgcagctaaacattcaccagaaatacgaagagctgaattgccagctcct
gctagccagtcatcgaagaaacctgataaaaaaccaacacctaaaaaggaaagcccgaag
aaagtaccagagaagacggaaagagtaacacctggcaagcaagctgccaaaaaggagaaa
cctgcacctgccaaggaaaaggtacccaaggaggagaagccggccgctgctaccgtgcct
gcctttcggagaggaaatgctgccagctaccagagttacctcaacagagaaggtccaagg
ttgctgggaacacgagacatacctgagggtgcccccggctgcctgaaaggtgtgacgtta
gttgtgaccggagtgttggaatgcatcgagcgtgatgatgccaaggagctgctggagcgc
tgcggcgccaaggtcacgcaaagtgtcagccgtaacaccacctacgtcgttgcgggcagg
gactcgggcccagccaagatacgcaaggcagaagagtgtaaggtggaaataatagatgaa
gatgcactgtacgagctgattgaaagtcgttctggcggggacggtaagcgcaaagccaaa
gaagctgaagtcaaggaggaaccagaggaggctagtacaccgaagaaaaagcgaaaagta
gaccctgacgacagctctgaggaacattgggtaaaggggtcgccaagggtcggagagtct
gtcatttccccaaccaagaaatcaaaagataccagcaccacggagacgccatcgacatcc
tgcagtcagaagtcatggacacctgccgagatgtgggtcgacaagtacaagccacagaca
accaagcagatcataggccagcagggagacaagagcaactgcggcaagttgctcctctgg
ttgcgcaactggcacaagagccgcgcgggacccaagaagcccatacccaagtggggagga
ggtggaggtgatggctccgctttcaaggcggcacttctgtccggagctcctggcatcggc
aagaccaccacggctacactcgcagcacgggaagctggctacagcatcttggagatgaat
gcatctgacactcgttccaagaagagtcttgctgagcacgtagctgagaccctgaggaac
cgcacgtttacaggatctggcacaacatccaaacacgtgcttatcatggatgaagtggat
ggcatggcaggcaacgaggacaggggtggagttcaggagatgattgctttgataaagtcc
acgcggatccccatcatatgcatctgcaatgaccgctcacacccgaaaatgcgctccttg
gttaactattgttttgacttgcgatttcagcggccgcaggtcaaacaaattcaggctgcg
ttaatgtccatcgcatgcaaggaaggtctctccatcacccctgccgttgtgcaagagatt
gtcatggcctccaaccaagatgtgcgacaggctttgcacaacctctcactttggagctcc
cgaacaaagaccatgagcgtgtcacaggtgaaggcagatgccggcaagggcaccaaagac
atcaaaatgggtccatttgaagtggttcgcaagattctgtcgagcaccgagggtggtcag
tccatgacgctgaacgagaaggcagcactcttctttcacgactacaacatggtgcctctg
tttgtacaggacaactacttgcacgttcaaccgttggaagccaagggcgaccgtcagaag
cacctgcgattggtcagcgaagcagctgactgcatcagctacggcgacttggtggagcgg
cagatccggcagcatggcagttggtcgctgcttcccatgcaggcattcttttccagcgtg
attcctggagaactggttcgtggtcacatgcgagagatgatcaccttcccagcctggttc
ggcaagaactcctccacgaccaagcgacaccgcctgctgcgtgaactcaagcatcataca
cacactcgagtgtccgctgaccggacgcaactgtccatggactacgtgggccccttgtta
gactcactgaccaggccactgatcgacaagggtgcagacggtgtgccaagtgtcgtgcgc
cgcatgcaccactactacctgcagcgagccgacctggacaatctttgtgacctggccttg
tggccgggcatgaaagaccccatggcaaacattgactccaaggtaaaagctgcactgaca
cgtaccctgaataaggaagcctttatgaccccctattccactgaagacatcgtcaaaaag
aaagcaaagaaaggcgctggaaaatccgagaaactggctgcgtcacaggacgatgaggaa
aatgccgaagaagaggaagaggaagccgagcctgacccaacacttgtcgattacgagtag
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integrated database retrieval system
