Rhipicephalus sanguineus (brown dog tick): 119390119
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Entry
119390119 CDS
T07382
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
rsan
Rhipicephalus sanguineus (brown dog tick)
Pathway
rsan03440
Homologous recombination
rsan03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
rsan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
119390119
03450 Non-homologous end-joining
119390119
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rsan03032
]
119390119
03400 DNA repair and recombination proteins [BR:
rsan03400
]
119390119
DNA replication proteins [BR:
rsan03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
119390119
DNA repair and recombination proteins [BR:
rsan03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
119390119
BRCA1-C complex
119390119
NHEJ (non-homologous end-joining)
MRX complex
119390119
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
SMC_N
SbcC_Walker_B
AAA_21
Prominin
ABC_tran
AAA_13
CC2-LZ
AAA_29
Trm56
AAA_16
Motif
Other DBs
NCBI-GeneID:
119390119
NCBI-ProteinID:
XP_037513599
LinkDB
All DBs
Position
4:63780492..63784700
Genome browser
AA seq
1305 aa
AA seq
DB search
MSMLEKLQIQGIRSFGPQEADRQIITFFSPLTLILGSNGTGKTTIIECLRNATTGDLPPG
QGKVFIHDPKLNSETEVNAQIKLKFIDVTGCANVLTRSFLLRQSKTNTTFKTVDSALVQY
AKDGTKTVATPRCFDVGATVIELLGVPRAILENVIFCHQTDSNWPLSEGQALKTKFDNIF
AATQYIKALEQIRKQKIEYTSGMKMMKETIKFLQANKEKADEYEDEVAKSEQRLEDCAST
IRDIQDRLEPLSTAWKALEEKLDKERNLQQKLSAEKEQLQYTENEIKRITLNLKDVFAGT
EEQLKQEIENFQIKMLEDKASLEREKTALQEACSLLSTNSDEHKKLLPVLGHLQSEQQAV
QETSQKVELKLERLNKNQCLNVDVMSSDSLKDKVMAVLAGLERKKNETQRRFQDAKQESE
EQEKALQGRIDSARELKSKCEQKLDSARKSIDENSKEIMRIRKELLDAKTYSSQVRDLNS
EIERFKQEIGALEGEDTREGLREKIDSSQALKDEIAGKLDKLNADLLSAQRFSKEQAELD
RIRQDIEEKSAALKSLIDENKEKFAELLGSVPTSDFGKRVKEVTAQIESDVSCLRSTVSK
LHAKKSSLEAQLKMHAEDLRNKENELEKSRKKIVAVCGSENLDESISDLSQFIEKVREET
GSLSGKLALYKSYARSLRAKPCCPLCKRDFDKRELVKNLIADLEKSIDTLPYETKRKSDE
ISEKENLFNAMQRLKGDETKMAQLRTHDIPKLKQKIEKLKAEQASLEAQLAKEEEIMENR
LFDVAMANSVANEAEHIDRLELDINSLRRSLASKSPRLQQLGSVKSTESILSEIQDLTSQ
GKVYDKNLHACRSKLEQLHSLDMSLKDAQSAKLRLESKMKEESILHEQKTKLESDSVTLK
SSLEALRKELQEHQHKLDKAQKAKSNAAGETENLLDRLRSEVSQRALEIEDLRKHFDKIQ
EYSASGNPQRLLDVRKKLESLREHGRKLETEKEEKAAHVRRLEQGLSRQELRERELKDNL
HVKELQKRKQQHVDKMEEIRDDMRRCGLGNLDAEKQKILEKIEKLKRDKRATEIQEGELR
VKIAAAKKELSGHFKDAGKKYTKALTEMHVKEFISKDLDMYYRALNYAVLKYHEQKMKDI
NRVIKELWQDTYCGDDIDYIQIRTDTDNKGLESSRRSYNYRVVMVKGKVEQDMRCRCSAG
QKVLASLIIRLALAENFCHNCGILALDEPTTNLDRSNIHGLALSLGKIVQARMNQRNFQM
IVITHDEEFMRLLSERNGHAEYFYKVEKSDEGCSRLTKCRLSTIM
NT seq
3918 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgctcgaaaagctacagattcagggcataaggagcttcggtccgcaagaagct
gacaggcaaattataacctttttctccccgctgacgctaattcttggcagcaatggcacg
ggcaagacgaccatcatcgagtgtctgcgcaatgcgactacgggcgacttgcctccgggt
caaggtaaagtgttcatccacgacccgaagctcaacagtgagaccgaggtgaacgcccag
attaaattgaagttcatcgacgtcacgggctgcgccaacgtgttgacgcgaagtttcctt
ttgcgtcaaagcaagacgaacactacgttcaagaccgtcgactcagcgcttgtccagtac
gcgaaagacggcacgaagaccgtcgccacgccgaggtgcttcgacgtcggcgccactgtc
atcgaacttttgggcgtcccgcgtgccatactggagaacgtcatcttctgccaccagact
gattctaactggccactctcagagggtcaggcgctcaagaccaagttcgataacatattc
gcggcaacccagtacataaaggccctggagcagattcgcaagcagaaaatagagtacaca
agcggcatgaagatgatgaaggaaaccatcaagttcctgcaagcgaacaaggagaaagcc
gacgagtacgaagatgaggtcgcaaagtccgagcagcgacttgaagactgtgccagcacg
atacgcgacattcaagataggctggaaccgctgagcactgcttggaaggcgctcgaagag
aagctggacaaggagcgaaaccttcagcaaaagctctctgctgaaaaggagcagcttcag
tacacagaaaacgagatcaagcgaatcacattgaacctgaaagatgtctttgccggtact
gaggagcagttaaagcaggaaatcgaaaattttcaaattaagatgcttgaggacaaggca
tctctagagagggagaagacagccctccaggaagcgtgctcgctgttgagcacaaatagc
gacgagcacaaaaagctgctgcccgtgttgggtcacttgcagagtgaacagcaggctgtc
caggagacatcgcagaaagttgaactaaagttggaacgactgaacaaaaaccaatgttta
aatgttgatgtcatgtccagcgattctctcaaggacaaggttatggctgtccttgccgga
cttgagaggaaaaagaatgaaacccaaagacgttttcaggatgcaaagcaggaaagtgag
gagcaggagaaggctctgcaaggaagaatagactctgcacgtgagctgaagtcaaagtgt
gagcagaaactagattctgcacgaaaaagcattgacgaaaacagcaaggagattatgagg
attcgcaaggaactccttgatgccaagacttacagctctcaggtgagagatctgaacagt
gagatcgagaggttcaagcaggagatcggagctctggaaggggaggacacccgtgaaggc
ctgcgagagaagattgacagcagccaagcactgaaagatgaaatcgccggcaagctggac
aagctcaatgcagacctccttagtgcccagcgtttcagtaaagagcaggcggagctcgat
aggatcagacaggacattgaagagaagtctgcggcacttaaatcgcttatagatgagaac
aaggaaaaatttgcagagcttctcggcagtgtgcccacatcagactttggcaagcgtgtg
aaggaagttacagcacaaattgaaagtgatgtcagttgcctccggagcacggtaagcaag
ctccatgcgaaaaagagctctctggaagcgcagcttaagatgcatgctgaggacttgaga
aacaaggagaacgagcttgaaaagagccggaaaaagattgttgcggtctgtggttccgaa
aacttggatgaaagtataagcgacctcagtcagttcattgaaaaagtgcgcgaagaaact
ggctcgctgagtgggaagcttgccctgtacaaaagttacgccaggtccctgagagcaaaa
ccgtgttgcccgctctgcaaacgagattttgacaaaagggagttggtgaaaaacctcatt
gccgacctggaaaagagcatcgacacacttccctatgagaccaaaagaaagtctgacgag
atttccgaaaaggaaaacctctttaatgccatgcagcggcttaagggtgatgaaacaaag
atggcacagttgaggactcacgacattccaaagctgaagcagaagattgagaaactgaaa
gctgagcaggcatccctggaagctcaactggccaaggaggaagagattatggaaaaccgc
ctgtttgacgtggccatggcgaattctgtggcaaacgaagccgagcacattgatcgcctg
gagctcgacataaactcgcttcgtcgcagcctggcatccaagtcgcccagattgcaacag
cttggctctgttaagtccacggaaagcatcctttccgaaatacaggacctcacgagccaa
ggcaaagtgtatgacaagaacctgcatgcctgccgttccaagctggaacagctccacagc
ttggacatgtctctcaaggacgctcagagtgcaaagttgcgactcgagtcaaaaatgaag
gaggagtcaatattgcacgagcaaaagactaagctggagtctgatagtgtgacattgaag
agttcgttggaagccctcagaaaggagctgcaagagcaccaacacaaactggacaaggca
cagaaggccaaaagcaatgcagcaggcgaaactgagaacctgctggacagactgcggtca
gaggtaagccagcgcgcattggaaatagaggaccttcggaagcactttgacaagattcag
gagtacagtgccagcggaaaccctcagaggctgttagatgtgaggaagaagctggagtcg
ctgagggaacatggtcgaaaactagaaactgaaaaggaagagaaggctgctcatgtgagg
cgccttgagcaaggtctgtcgcggcaggaactgagagagcgtgaactaaaggacaacttg
catgtgaaggagcttcagaagagaaagcagcagcatgttgacaagatggaggaaatcagg
gatgacatgaggcgctgcgggctgggaaacctcgatgccgagaagcagaagattttagaa
aagattgagaagctcaaaagggacaagagagcaacggagattcaggaaggcgagctcagg
gtgaagatcgccgctgccaagaaggagctcagcgggcacttcaaggacgccgggaaaaaa
tacacgaaagcgctgactgagatgcacgtgaaggagttcataagcaaggaccttgacatg
tactaccgagctctcaactatgccgtgctgaagtaccacgagcagaagatgaaggacatc
aaccgcgtcatcaaggagctctggcaggacacctactgcggcgatgacattgactacatc
cagatcaggaccgacacggacaacaagggccttgagagctctcgccgttcctacaactac
cgggtggtcatggtgaagggaaaagtggagcaggacatgcgatgccgctgcagcgcgggc
cagaaggtgcttgcgtcgctcatcattcggctggcacttgcagagaacttctgccacaac
tgcggcatactcgctctggacgagccgaccacgaacctggaccggagcaacatccatggc
cttgcgttgtcgttgggaaagattgtccaggcacgtatgaaccaacgaaacttccagatg
atcgtcatcacccacgacgaagagtttatgcggctcctgagtgagcgcaacggtcacgcc
gagtacttttacaaggtcgagaagtccgacgaaggctgctcacgcctgaccaagtgccgg
ctcagcaccatcatgtag
DBGET
integrated database retrieval system
