Rhipicephalus sanguineus (brown dog tick): 119390233
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Entry
119390233 CDS
T07382
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
rsan
Rhipicephalus sanguineus (brown dog tick)
Brite
KEGG Orthology (KO) [BR:
rsan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsan03021
]
119390233
03036 Chromosome and associated proteins [BR:
rsan03036
]
119390233
Transcription machinery [BR:
rsan03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
119390233
Chromosome and associated proteins [BR:
rsan03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
119390233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
SH2
S1
Spt6_S1
HHH_9
HHH_3
Tex_YqgF
S1_RRP5
Tex_N
Motif
Other DBs
NCBI-GeneID:
119390233
NCBI-ProteinID:
XP_037513728
LinkDB
All DBs
Position
4:complement(71786478..71838925)
Genome browser
AA seq
1729 aa
AA seq
DB search
MADFLESEAEESEDEEVTGKRPLVDDDDEEEEEEEDDDERLREEMKDLINDEEEEVEEDS
DEDVGGKKKRRHHDDFDDNLEDEDYDLIEENLGVKVQRKKKFKRVRRIEDEESDNEESKD
STNRDAIATELFEGSDAEAPADQEEERGEGEEEEREGSGSELESDPDDFIVDDDGQPITK
SKKKRHIKYTDHALQEAQDIFGVDFDFDEFSKYQDDYDEEMEEEEYEDEEEEGETRPRPK
KTSRKRQTKKSIFEVYEPVELERGHFTDRDNEIRTTDIPERFQLRAVPVTSAPEDEIARE
AEWIYKQAFGNPTISVQSTVDEGAKGSSAASNLAGRHQPPAGRKSVTAVAKIAEALKFMR
NQLFEVPFIAFYRKEYVEPDLNINDLWTVYKWDEKWCQLQQRKKNLQQLFQRMQEFQCDQ
ILQEDPDKPLPENVRPIDENDFQRLKEVQTPEELRDVYQFFLLYYAQDIPEMQETMRKRK
RKEAEAENGENDENAPAKEADDMDDENQRLKHPVRKRLFDICRDMGLDGLAKKFGLTPEQ
FGENLRDNYQRHEVDQFPVEPLVAATDFVSKRFTTAEEALKAARYMVAVMIAMDPLVRRC
IRETFFERAKISISPTKKGLKEIDETHPCYPVKYLKNKPVRDLVGAQFLNMTQAENEKLL
KITISMDGSTQSNPGVYLDEIKQLYYRDEFSNNVQEWNNQRSEALSFALSKFLYPSFEKE
LKAQLLVEAQEGIIKACCRKLYNWLKVAPYQVDAQMEEDEDFDTRDGIRVFAIAYENNWE
VPAFGALIDGTGEMMEYIRLPHLLKRKNAWRERERELKELDLKVLRKFIRNKKPHVICVG
AQSREALMVVEDIKGVVADLAENEQMPLINVELQDNDLAMVYMNSKKAENDFRDYPLLLR
QAISLARRMQDPLVEFSQLCTPDEEIFCLKYHPLQDLVPRDDLTNALNLEFVNRTNEVGV
DINLAISHIHTSFLVQFVCGLGPRKGASLLKTLKQAHQRLESRTQLVTVCHMGPKVFINC
AGFIKIDTTSFENSTNAYVEVLDGSRVHPEAYEWARKMAVDALEYDDVTEDVNPAEALEE
ILENPEKLRDLDLDAFAVELERQGYGNKSITLYDIRAELNHRYKDLRTAFRPPNPEETFN
MLTKETPQTFYIGKMVTCQVVGIARRKPHGQQLDQANPIRNDDTGLWQCPFCLKNDFPEL
SEVWNHFDAGSCPGQSMGVRVRLDNGVNGFILTKFISDKKVTNPEERVQIGMILHCRITK
IDIERFTVDLTCRSSDLSDVNNEWRPAKDLYYDYESEEKDRKVDDDSKKKQNRQTYVKRV
IVHPSFHNISYKEAEKLLSTMDQGDVIIRPSSKGVDHLTVTWKVYDGILQHIDVKEQGKE
NAFSLGSSLMINNEEFEDLDEIIARHVQPMASFARDLTTFRYFRDAEGGKREVIEKLLTE
EKKRNPSKIHYFVSVSREFPGKFMLSYLPRVKVRHEYVTVTPEGFRYRQQMFHSVGSLFR
WFKEHFRDPIPGTPSSVTAVRTPMGQSSYIGTTPSINISNVDPQAIQRAAANISSHMFAS
LSQVAGQTPSFPTPYGGTYANAYPYHQQPYTPSQAMATPLVTPSYHHAVATPSVTPRYPQ
TPQTSWAAAQQTPRGAHTPRHTPAAAAAAAQAVIQANPIPTVVSGTKSTGNPSIADWKRM
AEQWAKQRMEQQEASNRAAARRTPTTRASPSPMIESTPAGDATPLIDEQ
NT seq
5190 nt
NT seq
+upstream
nt +downstream
nt
atggcagacttcttggagagcgaggccgaggagtcggaggatgaggaggtgactggaaaa
cgtccattggtggatgatgacgatgaagaagaggaggaagaagaggatgatgatgagagg
ctgagagaggagatgaaggatctcatcaatgatgaagaggaagaagttgaagaagactcg
gatgaagacgtagggggcaaaaagaaacggcggcatcacgatgactttgatgacaatcta
gaagatgaagattacgaccttatagaggagaacttgggagtcaaagtacagaggaaaaag
aagttcaagcgtgtgaggagaatagaggacgaagaaagcgacaacgaagagagtaaggac
agcaccaatcgtgatgccattgccaccgagctgttcgaaggatctgatgcggaggcaccc
gcagaccaggaagaagagagaggagaaggagaagaggaagaaagggaaggctcaggttct
gagcttgagtctgatccggatgacttcatcgttgacgatgatggccagcctatcacaaaa
agcaagaagaagaggcacatcaagtacaccgatcatgccctgcaagaagctcaggacatc
ttcggtgttgattttgactttgatgagttctccaagtaccaggacgattatgatgaagaa
atggaagaggaagagtacgaggacgaagaggaggaaggggagacccggccacgccccaag
aagacgtcgcgcaagcgccagacgaagaagagcatatttgaggtgtacgagccagtggag
ctggagcgaggccacttcactgaccgggacaacgaaattcggacgacggacataccggag
cggttccaactgcgggccgtgccagtaacatctgcacccgaggacgagattgcgcgggag
gccgagtggatctacaagcaggcatttgggaacccgacaatctcggtgcagtcgactgtc
gacgaaggggccaaggggtcttccgccgcttccaacttggcaggtcgacaccaacctcct
gcgggccgcaagagcgtgacggctgtggccaagattgccgaggcgctgaagttcatgaga
aatcaacttttcgaggttccattcatcgccttctaccggaaagaatacgtggagcctgac
ctcaacattaatgatctctggacagtctacaagtgggacgaaaagtggtgccagctacag
cagcgtaagaagaacctgcagcagctgttccagcgtatgcaggagttccagtgtgatcag
atattgcaagaggacccggacaagccactgcctgagaacgtgcgccccattgacgaaaat
gacttccagaggttaaaggaggttcagacgcccgaggaactgcgcgatgtgtaccagttc
ttcctgctgtactatgcacaagacatacccgagatgcaggagacgatgcgcaagcgcaaa
aggaaagaggccgaagccgaaaacggggaaaacgatgagaacgcaccggccaaggaagcc
gacgacatggacgatgagaaccagcggttgaagcatcctgtccgcaagcgactgttcgac
atttgtcgcgacatgggtcttgacggccttgccaagaaatttggcttgacgcctgagcag
tttggtgagaatctccgagacaactatcagcggcacgaggttgaccaatttccagtggaa
cccctggtggctgctactgattttgtcagcaagcgcttcacaacagccgaggaggcgcta
aaggcagcgcggtacatggtggcagtaatgattgccatggaccctctggtacgaaggtgc
atacgtgagaccttcttcgagagggccaagatcagcatttcacccacaaagaagggcctc
aaggaaattgacgagacccacccatgctatccagtcaagtacctgaagaacaagcctgtt
cgagatttggtcggggcacagtttctcaacatgacgcaggctgaaaatgagaagctgctc
aagatcacaatttccatggatggaagcacccagtcgaatcctggagtttaccttgatgag
atcaagcagctctactatagggacgagttcagcaacaacgtccaggagtggaacaaccag
cgcagcgaggctctcagctttgccctgagcaaatttctttacccgagcttcgagaaggag
ctcaaggcacagctgctcgttgaggcgcaggaaggcatcatcaaggcttgctgccgcaag
ctgtacaactggctcaaggtggccccctaccaggtggacgcccaaatggaggaggacgag
gacttcgacactcgtgatggcattcgggtgtttgccattgcctacgagaacaattgggag
gttcctgcctttggtgcccttatagacggtaccggtgaaatgatggagtacatcaggctt
ccccatttgctcaagaggaaaaacgcctggcgggagagggaacgtgagctcaaggaactt
gatctcaaggtcctcaggaagttcattcgcaacaagaaacctcacgtaatctgcgtagga
gcacaatccagagaggcactcatggttgtcgaggacatcaaaggcgtagtagctgatcta
gcagagaacgaacagatgcccctgatcaatgttgagctgcaggacaacgacctggcaatg
gtctacatgaactccaagaaagctgagaacgacttccgagactacccgctgctgctgcgg
caagccatctcgctggccaggcggatgcaggatcccttggttgagttctcacagctctgt
acaccagacgaggagattttctgtctcaagtatcaccctctgcaggacttagtgccgagg
gatgacctcaccaatgcgctgaacctggagtttgtcaatcggaccaacgaagtcggtgtg
gacatcaacctggcaatctcgcacatacacacatccttcctggtgcagtttgtgtgcggc
ctcggacctcgcaagggtgcttcgttgctcaagacactgaagcaagcccaccaacgcctc
gaaagtaggacccaactcgtgacagtctgccacatgggacctaaagtgttcatcaactgt
gcgggtttcatcaagattgacacaacttccttcgagaacagcactaatgcctatgtggag
gtgttggatggatcgcgggttcatcccgaagcttacgagtgggctcgcaagatggctgtg
gatgccctagagtatgacgatgtcaccgaagatgtgaaccctgccgaagctctcgaggaa
attttggagaaccctgaaaagctcagggacttggatctcgacgcatttgcggtggagcta
gaacgtcagggatacggcaacaagagcatcacgctgtatgacattcgggcagaattgaat
cacaggtacaaagacctgcgcactgcgttccggccccctaaccctgaagaaacgttcaac
atgctcacgaaggagactccacagaccttctacattggcaaaatggtgacgtgtcaggtg
gtgggcattgcacgtcgcaagcctcacggacagcagctggaccaggccaatccgatccga
aatgacgacactggcctttggcagtgccccttctgtctcaagaacgacttcccggagctc
agtgaagtgtggaatcactttgatgctggcagctgtcctggacagtctatgggtgtgcga
gtgcgactggacaatggggtgaatggcttcatcttgacaaagttcatcagtgacaagaag
gtcaccaatcctgaggagagagtacagattggcatgattcttcactgcagaataacgaag
atcgacattgaaaggtttacagttgatctgacttgccgatcttcagacctttctgatgtc
aacaatgagtggaggcctgcaaaagacctgtactatgactatgagtctgaagagaaagac
aggaaggttgatgatgactccaagaagaagcagaatcgacagacgtacgtgaagcgtgtg
atagttcatccatcgttccataacatctcttacaaggaggctgagaagctgctcagcact
atggatcagggcgatgtgatcattcgtcctagcagcaagggtgttgaccacctgacagtg
acatggaaggtgtacgatggcattctgcagcacattgatgtgaaagagcaggggaaagag
aatgcgttcagtctggggtcttcgctgatgatcaacaatgaggagtttgaggacctggac
gaaatcatagccagacacgtgcagccaatggcgagcttcgcgcgggacttgacgacgttt
cggtacttccgggatgccgaaggtggcaaacgagaggtgattgagaagctgctcacggag
gaaaaaaagcgcaatccttccaagatccactactttgtctcagtctcgcgagagttccct
ggaaagtttatgctttcctacctgccacgagtcaaggttcgccacgagtatgtgacggtg
acccccgagggcttccgctaccgccagcagatgttccactccgtgggctccttgttcagg
tggtttaaggaacacttccgggaccccatcccgggcacgccaagcagtgtgactgcagtg
cgcacaccaatgggccagtcgtcttacatcggcaccacgcccagcatcaacatttcaaat
gtcgacccccaggcgattcagagagcagcagccaacatttcgagtcacatgtttgcctca
ttatctcaagtggccggccagacaccatcgttcccaacaccgtacgggggaacttatgca
aatgcgtacccttaccaccagcagccgtacacgccctcacaagcgatggcgacgccactc
gtgaccccatcataccaccatgcggtagccacaccatcggtgacaccccgctacccgcag
accccacagacttcgtgggcggctgcccagcagacaccacggggtgcgcacacaccacgg
cacacaccagctgcagctgccgcagctgctcaagctgtcatccaggccaaccccatcccc
accgttgtgtctggcaccaagagcacaggcaacccatcgattgccgactggaagcgcatg
gcggagcagtgggcaaaacaacgcatggagcagcaagaggcgtcaaatcgtgcagctgca
cgacgtacgccgacaactcgcgcatcgccgagccccatgatcgaatccactccagccggg
gatgccacaccgctcatagacgagcagtag
DBGET
integrated database retrieval system
