Rhipicephalus sanguineus (brown dog tick): 119390542
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Entry
119390542 CDS
T07382
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B-like
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
rsan
Rhipicephalus sanguineus (brown dog tick)
Brite
KEGG Orthology (KO) [BR:
rsan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsan03021
]
119390542
Transcription machinery [BR:
rsan03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
119390542
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rrn7_cyclin_N
Rrn7_cyclin_C
Zn_ribbon_RRN7
DUF7564
Motif
Other DBs
NCBI-GeneID:
119390542
NCBI-ProteinID:
XP_037514078
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Position
4:109118979..109124450
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AA seq
644 aa
AA seq
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MVVCASCGGEDFDEVSGLYYCSECNTQSQDVRVEQVDDEGAAPPPHVGRASPRRSRKEMG
DAPQEIKRPYPTNELFNAILVRQVDALISLGASPELRGVVCRLWMDYLVRLEAVSRVEDD
ERTPRIGAANRWSDLRTVEELLGASESSERKRKKLQKALFGSGVRTRLTPRSSRRRKRLK
NRCDVARAPNLDSDCEFESELPATASEGEQASDDDMEDFRSTAAKEYLERVVSRGVDLHD
KKIGRENEVTVVTLQRLLCVLYLGVLITGDPILLTDILRWARDGHLPYLHVLKILPEDAK
LWGQQWRTFVRLSVPTIDDLAAQAAHLAHFLDVRSELRQPPLLPIVMRLVADLNLPLEFV
NVCEQVLLTHPNMVPSWDAPPKRAARSVPLFSPVCEVRAAAVLLLALKLTFGLNGSREVK
LSRAVEELASRHPEANVFVWSRWERNLRSRLLLLRSSCYTFEPEDLDDVRDVGVLFRHPD
SAPADRCMVTKALREGMQRSFREMHGRELVFQRVPATSFAVTPAIRFFCERTAVSSGLRA
VLEESFLHQDVTYLTRATDGVTSVGGWAELCQREPEFVAVLGDGCDQYWTVALKRVYDLK
YSNVVQHSLPKTFLFLLEFMAAITHCPPKELYRDLLRIEALFLR
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggttgtatgcgcgtcctgtggaggcgaggacttcgacgaagtttcgggcctctactac
tgttcggagtgcaacacccagagccaagatgtgcgcgtggaacaagtggacgacgaaggt
gccgcaccacctccgcacgtcggccgggcctctccgcggcggtcgcgcaaggagatgggc
gacgcgcctcaggaaataaagcgaccctacccgaccaacgaactgtttaacgcgatcctc
gtgcgccaagtcgacgcgctcatatcgctcggcgcttctcccgagctgcgcggcgtcgtg
tgtcgactgtggatggactacctcgtcaggcttgaagccgtaagtcgcgtcgaggacgat
gagcgaacgccccgcatcggcgccgctaaccgctggagtgacttgcgaaccgtcgaagag
ctgctcggggcgtccgaatcgagcgaacgcaagcgaaagaaactgcagaaggcgctgttc
gggtcgggcgtgaggacgcgactcacgccgcggtcgtctcgccgtcgcaagcggctcaag
aaccgatgcgatgtcgctagagcgcccaatctcgactcggactgcgagttcgaaagtgag
ctccccgccacagcttcggaaggggaacaggcttccgacgacgacatggaggacttcagg
tcgactgctgctaaagagtatctcgagcgcgtggtgagccgcggagtcgacttgcacgac
aaaaaaatcggccgggaaaacgaagtcaccgtggtgacgctccaacggctgttgtgcgtc
ctctacttgggcgtcttgatcacgggagatcctatcttactgaccgatatactgaggtgg
gctcgagacggccacctgccctacctgcacgtcttgaagatccttccagaggacgccaag
ctgtggggccaacagtggcggaccttcgtgcgactctcagtgcccacgattgacgatctc
gcagcgcaggcggcccacttggctcacttcctcgacgtgcggagtgaactgaggcagccg
ccgctcctgcccatcgtcatgcgtctggtggcggacctcaacctccctctggagtttgtg
aacgtctgcgagcaagttctcctcacgcatcccaacatggtgcctagctgggacgcaccc
cccaagagagcggcacgctccgtgccccttttctcaccggtgtgtgaagtcagagccgcg
gctgtcctgttgctggcgctgaagctcacctttgggctgaacggcagcagagaggtaaag
ttgtcccgagccgtcgaagaactggctagccgtcatcccgaagcgaatgtgtttgtgtgg
tcccgctgggagagaaatctgcggtccaggcttcttttgctgcgttctagctgctacacc
tttgagcccgaggatctcgatgacgtaagagatgtgggtgtcctgtttcggcatcccgac
agtgctccagctgaccgctgcatggtgacaaaggcgctcagggagggaatgcaaaggtcg
tttcgagagatgcatgggagggaacttgtctttcaacgagtgccagcgaccagctttgct
gtcacgccagccatacgtttcttctgcgaaaggactgcggtttcgtcaggcttgagggca
gtgctggaagaatcgtttcttcaccaggacgtgacgtatctcacgcgtgccactgacggt
gtcacatctgttggagggtgggccgagttgtgtcaaagagagcccgagttcgtagccgtt
ctcggggacggctgtgaccagtactggacggtcgctttgaagagagtgtacgacttgaag
tattctaatgtcgtgcagcactcacttcctaaaactttcctatttctgttggagtttatg
gcagccattacacattgcccaccgaaagaactgtacagggacctattgcgcattgaagcg
ctgtttctcaggtag
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