Rhipicephalus sanguineus (brown dog tick): 119390814
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Entry
119390814 CDS
T07382
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3 isoform X1
KO
K22611
spliceosome associated factor 3, U4/U6 recycling protein
Organism
rsan
Rhipicephalus sanguineus (brown dog tick)
Brite
KEGG Orthology (KO) [BR:
rsan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rsan03041
]
119390814
03036 Chromosome and associated proteins [BR:
rsan03036
]
119390814
Spliceosome [BR:
rsan03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
119390814
Chromosome and associated proteins [BR:
rsan03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
119390814
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
HAT_PRP39_N
Suf
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
RRM_7
LSM_int_assoc
RRM_11
RRM_occluded
HAT_Syf1_M
Lsm_interact
Rep3_C
TPR_14
Motif
Other DBs
NCBI-GeneID:
119390814
NCBI-ProteinID:
XP_037514445
LinkDB
All DBs
Position
4:153072053..153122282
Genome browser
AA seq
951 aa
AA seq
DB search
MAGAEEDLSDEMETIMETNDSINEEDAMSDDSSCSEDDKDADAEEEKQIEELQAKITANP
YQYDSHTALIAYLRNTGNLERLRDAREAMAKIFPLTPELWLEWIKDESTLCESDEEKEKV
MPLFERAVQDYLSVALWLEYAQFSIGLMNAEQGLERVRQVFERAVTAAGLHVSQGSLLWE
AYREFEICLLSTVQVGASEESTQEQREQYVAQRNRVYSLFKRQLSVPLFGMEKTYRELKE
WSEAAIEPAVEQLYKKAKLKLEKIQEYETALLSEDDKGVPDLSLYLPYLEWEQVQGDPAR
IQCLYERALAQHCLVADLWERYMTYLDNQLKVESVSLPCHERSVRNCPWSANLWASYLKA
LERSHAEHGKVKEAMEQALQAGFSQGQDYQRLWLAFLDYLRRRIEAHSAQGDELLAPYLE
DLRAAFQKAVEHLLQYASTESDVCGPVLKYWAKVEAKVCHNLPRARELWNDITNQGRATD
AQTWLDYANFERTFGDDKHYRKVLFRGMYAAVDWPETLGDLLLLFEREEGTLETLDTATE
KYEAHMRRVLDKREKAAAREAAREAEQEAQKKMHRAEKKAEKKAERQAEKRREAEAKVFQ
RETPGQAKRKAQPPEPPPDTQEQETDKDGFKVPSVPAAKATTGEEPPSKKQKTEGEESGE
EKKERPKHGEVVKPDPLKEIRTVFLSNLAYDTEESHIEEAFKEVGEIEELRLVRDYKGRS
KGFGYLVFTHMQSVEAALKMDRTPVNGRPVFVSKCNERNQFKFRTGMEKNKLFVKGIPFS
VTEKELEELFGKYGELKGVRLVTYRNGHSKGIAYVEYANETSATVALVQTDGMTMGNQTL
QVAISNPPARGYRQQGKEDAAEDGQQRTQYPLASQVASLGGGPKETGLRGRGRTQVSLMP
RALQQRSSTAVTKKPEPKQEPQEQPMEVSGLSSEGSKGLSNEDFRSMLLKK
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtgccgaagaagatttgagcgatgagatggaaactataatggaaacaaacgac
agcatcaacgaagaagatgcaatgtctgacgacagctcttgctcggaagacgacaaggac
gccgatgccgaagaagagaaacaaatcgaggagttacaagcaaagatcacggccaatccg
taccagtacgacagccacacagctctgatcgcctacttgcgtaacacgggaaacctcgag
aggctgcgggatgcgagggaagcaatggccaagatcttccctcttacgcctgagttgtgg
ctggagtggatcaaagacgagagtacgctgtgcgagagtgacgaggagaaagagaaagtg
atgccactcttcgagagagccgttcaagactacctgtcggtggccctgtggttggagtat
gcccagttctccatcggcctgatgaatgccgaacaagggctcgaacgggtgcggcaggtg
tttgagcgtgcggtcaccgctgccggccttcacgtctcccagggctccctcctgtgggag
gcctaccgcgagtttgagatctgcctcctgtccaccgtccaggtaggtgcgagtgaagag
agcacgcaggagcagcgggagcagtacgttgctcagaggaaccgtgtctacagcctcttc
aagaggcagctctcggtcccactttttggtatggaaaagacgtacagggagctcaaggag
tggagtgaggcagccatcgagccagctgtggagcagctgtacaagaaggccaagctgaag
ctagaaaaaattcaggaatacgaaacggctctgttgtccgaagacgacaaaggtgtaccc
gacctgtcactgtacctgccatacctggagtgggagcaggtgcaaggtgaccccgcccgc
atccagtgcctctacgagcgtgctctggcacaacactgcctggtggccgacctctgggaa
cggtacatgacgtatctggacaaccagctgaaggtggaatctgtgtccctgccctgccac
gaaaggtctgtgcgcaactgtccatggtctgccaacctctgggcctcctacctcaaggcc
ctcgagcgctcacatgctgaacacggcaaagtgaaagaggccatggaacaagcacttcaa
gctggattcagccaaggccaagactatcagcgcctgtggctagcctttctcgactaccta
agaagacgcatcgaagcacactcagcgcaaggtgacgaactgctggctccttacttggag
gacctgcgagcagctttccaaaaagcagttgaacaccttttgcagtatgcgtcaacagag
agtgatgtatgtggtcctgtgctcaagtattgggcaaaagtggaggccaaggtttgccac
aacctgccgcgagcacgtgagctctggaacgacatcaccaaccagggacgtgccactgat
gcccagacatggctcgattatgcaaattttgaaaggacttttggggacgacaagcactac
cggaaggttctgttcagaggcatgtatgcggctgtcgactggcccgagaccctcggggac
ctactgctgctcttcgagcgtgaggaagggaccttggaaaccttggacacggcgacagaa
aagtacgaagcccacatgcggagagtgctcgacaagagagaaaaggcagcagcacgggag
gcagcccgtgaagctgagcaagaggcccagaagaagatgcatcgagccgagaagaaggcg
gagaaaaaggccgaacgccaagctgagaagcggcgagaagcggaggccaaggttttccag
agagagacacctggccaagccaagcggaaagcgcagccaccagagccaccccctgacact
caggagcaggaaacggataaagatggcttcaaagtgccgtcagtacctgctgctaaagca
acgactggggaggaaccaccttctaagaaacaaaaaaccgagggagaggaatcgggcgag
gagaagaaggagcggcccaagcatggcgaggttgtcaagccagaccccctcaaggagatt
cgcacggttttcctcagcaacttggcatacgacacggaggaatcgcatatcgaggaggcc
ttcaaagaggttggcgaaattgaagaactgcggctcgttcgtgactacaagggcagatca
aagggatttggctacttggtcttcacccacatgcaaagtgtggaggcagctctgaaaatg
gaccgaactccagtcaacggtcggcctgtctttgtgtctaagtgcaacgaacgaaaccag
tttaagtttcgaacgggaatggagaagaacaagcttttcgtcaagggcatacctttctcg
gtaacagagaaggaattagaggagctctttggaaagtatggtgaactgaaaggcgttcgg
ctagtcacataccgcaacggtcactcaaaaggaatagcttatgtggagtatgccaatgag
acatccgccacggtggcactagtgcagaccgacggcatgaccatgggcaatcagacactc
caggtagccatcagcaacccccctgcacgtggatatcggcagcagggcaaggaggatgcg
gccgaggacggacagcagaggacccagtatcccctcgcatcccaggtcgcatcgttgggt
ggcggaccgaaggagaccggcctgagaggtcgcggacgcactcaggtgtcgctgatgccc
agggcactgcagcagcgctcgtctaccgcggttacgaagaaaccggaaccgaagcaggag
ccgcaagagcagccaatggaagtgtcaggcttgtcatccgaaggcagcaaaggcctcagc
aacgaagacttccggagcatgctgcttaagaagtga
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