Rhipicephalus sanguineus (brown dog tick): 119391402
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Entry
119391402 CDS
T07382
Name
(RefSeq) LOW QUALITY PROTEIN: THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
rsan
Rhipicephalus sanguineus (brown dog tick)
Pathway
rsan03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rsan00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119391402
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsan03019
]
119391402
03041 Spliceosome [BR:
rsan03041
]
119391402
Messenger RNA biogenesis [BR:
rsan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
119391402
Spliceosome [BR:
rsan03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
119391402
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
LutB_C
DUF5101
Motif
Other DBs
NCBI-GeneID:
119391402
NCBI-ProteinID:
XP_037515013
LinkDB
All DBs
Position
4:complement(92998328..93044044)
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AA seq
692 aa
AA seq
DB search
MSRDKKVKRSKTGNDVSNSGSGPNLHMDYFLIEEEDSKTRDPQDDEAVFRRICGEIQANM
KKILEMKLQRRPVADVEKLRVETSLLFLGLKKINRLDKHRLKAAKDAVNEKKQKVDNFHL
QLQNLTYEVMHLQKEVTKCMEFRSRDEEIDLVPVEEFRREAPAEVLKKVRECSKLCSAGK
LLNSNSLEQQCLMRQPQQFTSDSSDVGFRTLSQKLRGLESLREQYDREIERKRECLSGIQ
PTLQAVLEAAQPLQADLGLPLQAHQGEHANAQYLSRPLYVLYVQAAAYQHAYGDCFEVGM
EGSVEESKALLETTQEKQEEDSGESDQEESNKGKRHRRLTRSGTGLSSVAKCLQKHPLTV
VITLQHKGYHLQITFTYIIALHIVTVTAKVTEPHGVSSGVSASPVMSPSTILDNLFGDDN
GLCSPNPGNHFQLKKNGLEDFSKVVAEVGKAYRWAQRLAGLEFLQGSVASVVANHEVGRA
FVEEFAHSIAARFAARVGLYEQLLSLEKGLVQVPAQLASHFPSKVTSMLKQWTQVTHADV
ESHPSHKEMEELGLIRGDELVYQAVLRRGSAMVKALVLLRDNYPREAPLFLLVLQLREEC
SSRDDDAVKELERELNLHCVEQGRCRQXDQLLSCQLQQLLVSMDILLESLCDQLDAPREF
SRDKVLARTARGPGRSRPYKFLPKPGIFTQRT
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgagccgagacaagaaagtaaagcgctcaaaaaccggtaacgatgtctccaactccggt
tcggggccgaatctccatatggactacttcctgatagaggaggaagactcaaagacacgt
gacccccaggatgatgaggctgtcttccgcaggatctgcggcgagattcaggcgaacatg
aagaagatactggaaatgaaactgcagcgtagacccgtggctgacgttgaaaaacttcga
gtggagacatccttgctgttcctgggactgaagaaaatcaatcgcctggacaagcaccga
ctcaaagcggcaaaggatgccgtcaatgagaagaagcagaaagtggacaacttccacctc
caactgcagaacctgacctacgaggtgatgcatctgcagaaagaggtgaccaagtgcatg
gaattcaggtcccgggacgaggagatcgacctggtacctgtggaggagtttcgcagggag
gcaccagcagaggttctcaagaaggtgagagaatgctcgaaactgtgctcagccggaaaa
ttgctgaacagcaattccttggagcaacagtgcctcatgaggcagccgcagcagttcacg
agtgactcctcggacgttggattcagaacgctgtcccagaagctgcggggcctggagtcc
ttgcgtgagcagtacgaccgcgaaattgagcgcaagcgtgagtgcctctccggcatccag
ccaacactgcaggcagtgctggaggcagcacaacccctgcaagccgacctgggcctgcct
ctgcaggcccaccagggggagcacgccaacgcccagtacctgtcgaggcccctgtacgtg
ctgtacgtccaggcggccgcctaccagcatgcctacggtgattgctttgaggttggcatg
gaaggcagcgtggaggaatccaaggcacttcttgaaacgacgcaagagaagcaagaggag
gacagtggagaatcggaccaggaggaatcaaataagggaaaacggcacaggaggctgacc
cgcagtggaaccggtctgtccagtgtggccaagtgtcttcagaagcaccccctcaccgtt
gtgatcactcttcagcataaagggtaccacttgcagatcacgtttacgtacatcattgcc
ctgcacattgtcacagtcacagccaaagtcactgagccccatggtgtctccagcggtgta
tctgcaagcccagtgatgtccccatccacgattcttgacaacttgtttggtgatgacaac
ggtctctgttctccaaaccccggcaatcattttcagctcaagaaaaacgggttggaggac
ttctccaaggtagtggccgaggtgggcaaggcttaccgctgggcacagcgcctggcaggc
cttgagtttcttcagggttccgtagcttccgtggtggccaaccacgaagtggggagggcc
tttgtggaggagtttgcgcactccatcgccgcccgcttcgcggctcgagtaggtctttac
gagcagcttctgtccctggaaaagggcctggtgcaagttcctgcccagctagccagtcat
tttcccagcaaggtgacctcaatgctgaagcagtggacgcaggtgacccatgcggacgta
gagagccacccatcacacaaggagatggaagaactaggccttatacgaggggacgagctt
gtctaccaggccgtgcttcgccggggatctgccatggtaaaggccttagtgctgttgcgt
gacaactacccgagggaggcacccctgtttctgctggtgcttcagctgcgggaggagtgc
tccagccgagacgacgatgccgtcaaggagttggagcgcgagctcaacctgcactgcgtg
gagcagggcaggtgcaggcagngcgaccagctgctgagctgtcagctccagcagctgctg
gtctccatggacatactgctcgagtcactgtgcgaccagctggacgcaccacgcgagttc
tccagggacaaggtgctcgcccggacggcgaggggtccaggaagaagccggccatacaag
tttctccccaaaccgggcattttcacgcaacgaacataa
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