Rhipicephalus sanguineus (brown dog tick): 119393658
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Entry
119393658 CDS
T07382
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 1 isoform X1
KO
K21643
HMG box transcription factor BBX
Organism
rsan
Rhipicephalus sanguineus (brown dog tick)
Brite
KEGG Orthology (KO) [BR:
rsan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsan03000
]
119393658
Transcription factors [BR:
rsan03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
119393658
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Paralog
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Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
119393658
NCBI-ProteinID:
XP_037516694
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Position
5:55439292..55749954
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AA seq
882 aa
AA seq
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MSHGGENRCETRLPAATAPPTAGPSSSAEALVVRDDVEEEGCCRGEEDWCGGAGGAGVRR
PMNAFFLFCKRHRSVVRERYPHLENRAITKILGEWWASLEPHEKHTYTELAKQYKEAFMK
ANPDFKWCKMPTLPTRSPVTRTKGATTKGDTLRWSPEQTNCPRSDMPRVPTLTKDPLSIS
RQNNSSPVLQQQGSNSLDEPPTTKPMTESGGNAAEQSGAPNPTPPSNPQPVSCKPPKKRY
LENLENGTYGGGNAGRIKESSSSPSPTPSPVPCAPPQRAASTDQQTNNACSALLELAEGC
QGGKKPPTAGGRQKTGDLNTKSQDNGSSTLSSATTTTTTTSTSTSSNGSSSLCGGGNMPP
AGYGPIPMFNVGAANRFIDQAFSQPTTASSKSVSPPPPFTALSTSSTSTPPTISSSVTGL
DSGGGSGSAAANARERERERERFFNVSSALSLAQSLNRGDEEQPLNLCKERPMTTIKTCQ
QDIINHIIDKFLCGPSNVEPLDGTVFSAHGSARHPDDSPAVPAVVAAAVPGTVPTPNAGL
YRGGADEEVYDVQKKVAAGSHKSGVRRKGLAGSSPSKRARVNTSSAGDEDGGSSPERARK
SQRSCKGQRYQALVSEGVLPGSKERKGLVRKSDEEGDDEPSRLGGAGRREDGAKMPRKNS
GSFNLDAQIAALPKCSMESFTRRKNKKKIGRPEDEGRDDRPSSDAAEPGGMDPDFRTSLA
RGVRQRSESGASGTDEAVDDPSSPPPVSSPSDHSSVTPRKFKTGDFDLDEHLAALPKCDI
EVLSRRKKELRRDSGSSSGRQDSKADDSGTESDHAGASESTEENGVREWHSGEEEEMEEA
GRTSPKKDKRKRRKGALMEEDFPSSLATLADIALSQKEKMQE
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgtctcatggaggcgagaaccgctgcgaaaccagattgcccgcagcgacagcgccaccg
acggcgggcccttcttcttcagccgaggccctggtggtgcgggatgatgttgaggaggag
ggctgctgccggggggaggaggactggtgtggcggagcgggcggagccggggtgcgcagg
cccatgaatgccttcttcctgttctgcaagcggcaccgcagcgtggtgcgcgaacgctac
ccgcacctcgagaaccgcgccatcaccaagatcctgggcgagtggtgggccagccttgag
ccccacgagaagcacacctacacggagcttgccaagcagtacaaggaggcttttatgaag
gccaatccggacttcaaatggtgcaagatgcccaccttgcccacgcggtctccagtgacg
cgcactaagggggccaccacaaagggagacacgctgcgctggagccccgagcagacaaac
tgtccccggtcggacatgccacgggtgcccacccttacgaaggacccactgagcatctcg
aggcagaacaacagtagcccagtgctgcagcagcagggctcaaactctttggacgagcca
ccgacgacaaagccaatgaccgagtctggtggcaacgcggccgagcagtctggtgctccc
aacccgacacccccaagcaacccgcagccagtcagctgcaagcctcccaagaagcgctac
ttggagaacctcgagaacggcacgtacggcgggggcaacgcgggccggatcaaggagtcc
tcgtcgtcgccgtcaccgactccctcgccggtgccctgtgcaccaccgcagagggctgcc
tccacggatcagcagactaacaatgcctgttcggctctgctcgaacttgccgagggatgc
cagggtgggaagaagccaccaactgctggaggtcgccagaaaactggtgacctgaacacc
aagtcacaagataatggcagcagcaccctgtcctctgccacaacaaccaccacgacaact
tcgacgagcactagcagcaacggaagcagcagtctatgtggaggcggcaatatgccccca
gccggctatgggccaatccccatgttcaatgtcggtgctgccaaccgcttcattgaccag
gcattcagccagcccaccactgccagcagcaagtccgtgtcaccgccgccgccattcacg
gcgctgtcgacttcgtccacgagcacgccgccgactatctcgagcagtgtgacgggccta
gatagcggaggtggaagcggctcggccgcggccaatgcgcgggagcgggagcgtgagcgc
gagcggttcttcaacgtgtcgtcggcgctgagcctcgcacagtcgctcaaccggggcgac
gaggagcagccgctgaacctgtgcaaagagcgccccatgacgacgatcaagacctgccag
caggacatcatcaaccacatcatcgacaagttcctctgcggacctagtaatgtggagccg
ctggacggcaccgtcttctcggcgcacggctctgcgcggcatcccgacgacagccccgcc
gtgccagccgtcgtggccgctgccgtcccaggcacagtgcccacgccgaatgccggactg
taccgtggcggtgcggacgaggaagtgtatgacgtgcagaagaaggtagccgccggaagc
cacaagagtggcgtgcggcgtaaggggcttgccgggagttcgccgagcaagcgtgcacgg
gtcaacacatcttcggctggggatgaggacgggggcagcagcccggagagagcgcggaag
agtcagcggtcgtgcaagggtcagcgttaccaggctctcgtgtcagaaggcgtgctgccg
ggctccaaagagcgaaaggggcttgtccgcaagtcggatgaagaaggggacgatgagccc
agcaggctgggtggtgcaggacgcagggaggacggggccaagatgcctcgcaagaacagc
ggcagtttcaacctggatgcccagatagcagcactgcccaagtgtagcatggagtcgttc
acgagacgcaagaacaagaaaaagattggccgtccagaggacgaaggcagggacgatcgc
ccctcttccgacgccgcggaaccaggaggcatggacccagacttccggaccagcttagcc
aggggtgtgcggcaacgcagcgaatcgggggcgtctggcactgacgaggcagtagatgac
ccctcgagccccccacctgtatcctcacccagtgaccattcgtctgttacgcccaggaag
ttcaagacaggggactttgacctggatgaacatcttgctgcccttccaaagtgtgacatt
gaggttctgagccgacgaaaaaaggaactacggcgagattctggctcatctagcggcaga
caagactccaaggccgatgattcggggacagagtcggaccatgcgggtgcctcggagtcc
accgaggagaatggagtgcgagaatggcatagtggtgaggaggaggaaatggaagaggct
gggcggaccagccccaagaaggataagcggaagagacgcaaaggtgcgctgatggaggag
gacttccctagcagcttggcgactctggccgacatcgcgctgagtcagaaggagaagatg
caagaatga
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