Rhipicephalus sanguineus (brown dog tick): 119393740
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Entry
119393740 CDS
T07382
Name
(RefSeq) paired amphipathic helix protein Sin3a isoform X2
KO
K11644
paired amphipathic helix protein Sin3a
Organism
rsan
Rhipicephalus sanguineus (brown dog tick)
Pathway
rsan04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
rsan00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
119393740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rsan03036
]
119393740
Chromosome and associated proteins [BR:
rsan03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
119393740
REST complex
119393740
Heterochromatin formation proteins
Other heterochromatin formation proteins
119393740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
HHD_RTEL1
APO_RNA-bind
Motif
Other DBs
NCBI-GeneID:
119393740
NCBI-ProteinID:
XP_037516797
LinkDB
All DBs
Position
5:71523767..71593420
Genome browser
AA seq
1379 aa
AA seq
DB search
MSRRLEEHHPGLNSSAGAVFPGRNHASSGGFHRPTLGGVAPGGGGIVGGSAVGSRAKPPS
QQRQPLALLQDSTHSGAPAVADNRENMQGPGVQFTVQSSGFQPRLGAGSLTQLGHNHSPS
SVHHPMGGQSHTTQAHTPQLHGQQQFQRLKVEDALSYLDQVKLRFGNQPQVYNDFLDIMK
EFKSQSIDTPGVIQRVSNLFKGHPELIVGFNTFLPPGYRIEVQANEQVNVSMPGSLSTTL
TAGGGPVVPAQPAAPQGPPTAAPAGGAAPSLVPPASVAASPPSGIKSGHLPISGPPPSGL
GGGQPPHSSPPSHGAPMAPQPPAVASGGQSTTAPASQASQPVEFNHAINYVNKIKNRFQG
QPDIYKQFLEILHTYQKEQRNLKEGVQTGAKPLTESEVYAQVAKLFQNQEDLLQEFGQFL
PDANGASTHSLVTHSLDFGFQPVKAVNNDHTAAAKKPSTGLTKPSLVSGLSTSLKQAGPP
LKRPLSHLSGSVTKKQKMTSLKDVSLAEAGKHGTLNEFAFFDKVRRALRGQEVYENFLRC
LILYNQEIVSRSELVHLVTPFLGKFPELFKWFKDFIGYKDLGGQIEPIPNKVVQQERISG
DPSMEIDYSSCKRYGASYRALPKNVVQPKCSGRTPLCKEVLNDTWVSFPSWSEDSTFVSS
RKTQYEEYIYRCEDERFELDVVVETNLSTIRILEAIQKKLQRMSAEDRQRFQLGDNLGGS
SNVLQQQAIRRIYGDKAADIIEGLKRNPTIAVPLVLRRLKAKEEEWREAQKSFNKVWREQ
NEKYYLKSLDHQGITFKQNDVKFLRSKSLLNEIEAIYEERREQMEEGTGEVPTGPHMSLA
YLDRSILEDAANLIIHHVKRQTGINKEDKQKIKQLLRQFIPDLFCLPRGELSDDEVDKDD
DMETEDGESQPLPSTPNHRPDDSFPKDGDKGALRTGSEDCTGSMDGSSQLSAPQMQNLYS
DDSYALFFVNDHWYLFFRLHHLLCERLTKIYRQSTNLAADEAKERKDRKESTAVALRLKP
RSEVEVEDYYPVFLDMVKSLLDGNMDGTQYEDTLREMFGIHAYTVFTLDKVVQNAVRQLQ
HIVCDEACQRCTELYVEEQRAGGAGGACATAAHRAHLESSYQKKAEQALVNDNCFKLVLY
QKETKLTIELIDTESDMSEDPVEIEKWSEYVDKYVAGEDSISDELRDQLSKKPVFLPRNV
RARRQQVKKQESEAKKLASSANGNGNNNGTCNKSPCTNDESTNDEVPFSAAVGGAALGSS
VSAGAGKTDLVEDSQCKFNLNSYKMVFVVNSSSYIYNRRALRRAQQSHRKVSQRMHHSFN
KWHQGWLDKNVDIEQNRLCEDWLLGLGYECTTNCIQLQDCSRPPYRPFRRFRTSPSVRS
NT seq
4140 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgccgtttggaggagcaccaccctggactgaactcgtcggccggtgcagtgttt
ccaggtcgaaaccacgcgtcgtcgggtggcttccacaggcccactcttgggggtgtggcc
cctggtgggggcggcatagtgggcggcagtgcagtggggtcgcgcgccaagcctccctcg
caacagcggcaacccttggccttgctacaggactctactcacagtggtgcccctgcggtc
gccgacaatcgtgaaaacatgcaaggacccggtgtccagtttaccgtgcagtcgtctggc
ttccagccacgtttgggtgccggcagcctcacccagttgggtcacaaccacagcccatcg
tcagtgcatcaccccatgggtgggcagtcccacacaactcaggcgcacacgcctcagctg
cacgggcagcagcagttccagaggttgaaagtagaagatgccctctcataccttgaccag
gtcaaactgaggtttggcaaccagcctcaagtatacaatgatttcctggacatcatgaaa
gaattcaagtcgcaaagcattgacacaccaggtgtgatccagcgggtctcgaacctcttc
aagggccatccagagctcattgttggcttcaacacgttcctgccacccggctaccggatt
gaagtacaggctaacgagcaggtgaacgtgagcatgccaggctccctgtcgacgaccctg
acggcaggggggggccccgtggtgcccgcacagcctgcggccccgcagggtccccccaca
gcagctccggcggggggcgcagctcccagtcttgtgccacctgcctcggtggcggcgtcg
ccgccctcaggcattaagagtggccatttgccgatcagtgggccccctcccagtggcctg
ggtggagggcagcctccccacagtagccctccatcacatggggcccccatggcgccacag
ccgcctgcggtggccagcggtgggcagagcaccacggccccagcgtcgcaggcaagccag
ccagtcgagttcaaccatgccatcaactacgtgaacaaaatcaagaatcgtttccaaggc
cagccagacatatacaagcagttcctggagatactgcatacttaccagaaggagcagcga
aacctaaaagagggtgtgcagacaggtgccaagccgttaacggagtccgaagtatatgcc
caagtggccaagcttttccaaaatcaggaagacttgctccaagagtttggtcagttcctg
cctgatgcaaatggagcctctacacactctctggtgacgcacagtctggactttggcttc
caaccggtgaaagcggtcaacaacgaccacactgctgcagcaaagaaaccaagcacgggc
ctcaccaagccaagtcttgtgtccggcctgagcacgtcactgaagcaggcaggcccaccg
ctcaagaggccattgtcgcacttgtcgggatctgtgacaaagaaacaaaagatgaccagt
ttgaaagatgtaagcctagcagaggctggcaagcatggcaccctcaatgagtttgccttc
ttcgacaaggttcgccgtgctctccgtgggcaggaggtctatgagaatttccttcgttgt
ttgatcctctacaaccaagaaattgtgtcacggtcagagttggtccacctggtgacacca
ttccttgggaagtttccagagttgttcaagtggttcaaagacttcattgggtataaggat
ctcggtggacagatagagcccatacccaacaaagtcgttcagcaagaacgcatctcaggc
gatccatccatggaaattgattactcgtcctgtaaacgttacggtgccagctaccgagca
ctgccaaaaaatgttgtacagccaaagtgcagtggccggacaccgctttgtaaagaggtt
ttgaatgacacctgggtctcgtttccgtcgtggtcagaggattccacattcgtaagctcg
cgcaagacccagtatgaagaatacatttaccggtgtgaagatgagcgtttcgagttggac
gtggttgttgagaccaacctgtcgacaatccgtattctggaggcaatacagaagaagctg
cagcggatgagcgctgaggatcggcagcgcttccagctgggtgacaacttgggaggctcg
tcgaatgttctgcaacagcaagccattcggcgtatctacggcgacaaggctgccgacatc
atcgagggcctcaagcgcaaccccaccattgctgttccccttgtactgcgcaggctcaaa
gccaaggaggaagagtggcgtgaggcacagaagagcttcaacaaggtatggcgagaacaa
aatgagaagtactacctcaagtcgctggatcaccagggcatcacgttcaagcagaacgac
gtcaagtttctgcgttccaagagcctgctgaacgagatcgaagccatttacgaagagcgc
cgggaacagatggaagagggcactggcgaagttcctacaggtccccacatgagcctggct
tacctcgaccgctccattctggaggatgcagccaacctgatcatccaccacgtgaagcgc
cagacgggcatcaacaaggaggacaagcagaagatcaagcagctattgcgtcagttcatc
cccgacctgttctgtctgccacgtggcgaactctccgacgatgaggtcgacaaggacgac
gacatggagaccgaggatggcgagagccagccgctgccctcgacgcccaaccatcggccg
gacgactcattccctaaggacggtgacaaaggtgcacttcggacaggctcggaggactgc
actggcagcatggacggtagctcgcagctgagtgcaccgcagatgcagaacctttattcg
gatgactcatacgcactgttctttgtcaacgatcattggtatctgttctttcggctgcac
catctgctgtgcgagcgtctcacgaagatctacaggcagtcgacaaacttggctgcggac
gaggcaaaggagcgcaaggaccggaaggaatccacggctgtggcactgcggttgaagcct
cggagcgaggttgaagtggaggactactacccagtgttcttggacatggtcaagagtctg
ctggacggcaacatggacggcacgcagtacgaggacacccttcgggagatgtttggcatc
cacgcctacacggtgttcacgctggacaaggtggtgcagaatgcggtgcggcagctgcag
cacatcgtgtgcgacgaggcgtgccagcgctgcaccgagctctatgtggaggagcagcgg
gccggaggcgcagggggcgcatgtgccaccgccgcacaccgtgcgcacctcgagtccagc
taccagaagaaagccgagcaggccttggtcaacgacaactgcttcaagcttgtgctgtac
cagaaggagaccaagcttacgatagagttgatagatacagaaagcgacatgtctgaagat
cctgtcgagatagagaaatggtcagagtacgtcgacaagtacgtggctggtgaagattcc
atctcggacgagttgagagaccagctgtcaaaaaagccagtcttcctgcctcgcaacgta
cgagcccgccggcagcaagtaaagaagcaagagagtgaagccaagaaattggcatctagc
gctaatggcaatggcaacaataatggcacctgcaataagagtccttgcaccaacgatgag
agcaccaacgatgaggtgcctttctctgcagctgtaggtggtgctgcactggggtcatct
gtgtcggctggtgcaggcaaaacggacttggtggaggacagtcagtgcaagtttaacctc
aattcatataaaatggtgtttgttgtcaacagctcaagttacatctacaaccggcgggca
ttgcgtcgagcacagcagtctcatcggaaagtgtctcagcggatgcatcacagcttcaac
aagtggcaccagggctggctggataagaacgtggacatagagcagaacaggttatgtgag
gactggctgttgggtctcggctacgaatgtacaacaaactgcatccaactccaagactgc
tcgcggccgccctaccgcccgttcagacgcttccggacttcaccttctgtccgctcgtga
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