Rhipicephalus sanguineus (brown dog tick): 119394016
Help
Entry
119394016 CDS
T07382
Name
(RefSeq) intraflagellar transport protein 140 homolog
KO
K19672
intraflagellar transport protein 140
Organism
rsan
Rhipicephalus sanguineus (brown dog tick)
Brite
KEGG Orthology (KO) [BR:
rsan00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rsan03037
]
119394016
Cilium and associated proteins [BR:
rsan03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
119394016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_IF140-IFT172
Beta-prop_IFT140_2nd
Beta-prop_IFT140_1st
TPR_IF140_C
WD40_CDC20-Fz
Beta-prop_HPS5
WD40_WDHD1_1st
WD40_Prp19
ANAPC4_WD40
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
TPR_IFT80_172
TPR_GEMI5
TPR_2
TPR_14
Beta-prop_NUP159_NUP214
TPR_COPA_B
TPR_12
Motif
Other DBs
NCBI-GeneID:
119394016
NCBI-ProteinID:
XP_037517189
LinkDB
All DBs
Position
1:65264660..65323582
Genome browser
AA seq
1451 aa
AA seq
DB search
MAVYLDCRLEDAALSSAAKTRLSCYRAGALFALAFRERDAGGVRLLSEDGVPLPSELPRK
QGAQVSALSWHPWAPLLALGWDSGEVCVWDERRASLHEPQTQHKRAVARLLWNGAGTRLV
SIDAVGTCIGWKAARAANGGVSFATAFYHELRDSLVALAFRDHRRRRTHNRSVEHEGGEE
EVFLSSNWGNEGSFGLTDDEATSNDFYVGSTTGVIYFVSENGSCGDVYQMDAGIARLLHD
VSRDALVVVTDTLTLAQFSIADDGSLSEQSRFKVSGHGTDMAVTWVAVQDGVIGIAAGEA
SVRLLNLETGETTVLSLPDADYGEAVSCITADAPGRTLIVGTNRGRVVVWTLTENSAGST
HWRSQLAASLRSPIRELAWCDTHRIAGTLTIEDLFLLIEQEACFSFREGCLALQTAAKQV
FVDGVSGNCQIILQTEIPVKSLFVSRHHIAVSNGKRLFFYEMLPSSKSAKFLGAMNTASS
LIGLHEASVYLVENGKLNAKTFQGILKQAIPISEEDVSAVCLDISGIFLALGLSNGRVRV
WDLSRREAKLHAELKTALVAKRNDGPLYKISSIKCNCTGNKVSILVVEDIAPHRTARREG
CTLYVWSIEDDSLFEFSFATGESSKGQAVGDSPSSGTVRDRAPISHYWDESDPRLLVCEA
RSAPSGRTQIDAPGNREPHVVVVSLFVTTEHGILEQDVFPLDDKFRLMGVQVPFFYLLAK
HSDDVSEPGAAEKVPGSKHIFRLPMRDFVGFQDCDDTVRDAIMTFSFFMTLRDMDEAFKA
IKAIKNEAVWENMARMCVRTKRLDVAKICLGKMAHARGAWSLRRAMETEPELEAQTAILA
LQLGMVQEAQDLLESCSRYDLLVRVLEDSGQWERAIDVARQHDRIRLRATYHNYAKHLEA
SGDIEKAVAAYEKADTHLFDVPRMLFDDPQALEQYVRASGSPDMIKWWAQYMESIGEMEA
ALQFYEAARDYLSLLRVHCYFGNVDKACEIANETEDRAACFHLARYLENQDNVLQAVHFF
ARARAFGNAIRVCKENEMDDQLYTLALQAAPKEALEAARYFEQRQDGLEKAVTLYQRGGW
ASKAAELALQAGDLGALQQAAQELGPNADPVLVRTTADRLAATGKHDQAVLLLATSGQSD
AALQLCIQSNVLITEELADRLTEGIATDDKAKLRGVLEKIAECCLKQDNYHLAAKKFTQA
GDKVQAMRALLKSGDTRKIVFFANVSRQRDIYILAANYLQTLDWQRDADAAKNIVSFYTK
ARAFDLLASFYEACARAEIEDRRDYEKALAALNEAHECLQLCGDASKAAARVRDHMDAVR
KFLAIQELYADSPLEAAAQCEAMTKLNLEPAVRKGDLFAFLVQHYVSEKDYAAARRCLQE
LQTAVPGVAVSDYVDAEVLRLVGWSSDERRSLQQMSLLARRAAASNGAATEGDEDRYSSD
GEVQEELFDAP
NT seq
4356 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgtaccttgactgccgtctggaagacgcggctctgtcgtctgcggccaagacg
cgactgtcctgttaccgtgcaggggccctgttcgcattggccttccgagaaagggatgcg
ggaggtgtgcgtttgctatctgaagacggtgtgccgctgcccagcgaacttccgcgaaag
caaggagctcaggtgagcgccctgtcgtggcacccttgggcaccgctgctggcgctggga
tgggacagcggcgaggtgtgcgtgtgggacgagcgccgggcgtcgctgcacgagccgcag
actcagcacaagcgcgccgtggccaggctcttatggaacggcgccggcacgcgactggtg
tctatcgacgccgtgggcacctgcatcggctggaaagcggccagggcggccaacggaggc
gtctcctttgccacggccttctaccacgagctcagggactcgctggtagccctagccttc
agggaccaccggcgacgacgcacacacaaccggagcgtggagcatgaaggcggcgaggag
gaggtgttcctgtcgtcgaactggggaaacgaggggtcctttggactgacggacgacgag
gcgacgtccaatgacttttacgtgggctcaacgacgggagtcatctacttcgtcagtgag
aacgggagctgcggcgacgtgtatcagatggacgcaggcattgcacgtcttctgcacgac
gtttccagagacgccctcgtagtcgtcaccgacacgttgaccctagctcagttttccata
gcagacgacggctcgttatccgagcagagtcgtttcaaagttagcggacacggtacggac
atggcggtcacgtgggtcgctgtccaagacggagtcattggcatagcggccggtgaagca
agcgtccgcttgctgaacctcgagaccggagagaccacggtgctctcgctcccagacgcg
gactacggcgaagcagtgtcgtgtataaccgcagatgcgcccggaaggactttgatcgtg
ggcacgaatcgcggccgggtcgtcgtgtggacgctaacagaaaacagcgcgggcagtacc
cattggcgatcgcagttggccgccagtttacgtagtcccattcgagaactggcgtggtgc
gatactcaccggatcgccggcaccctgacgattgaggatttgtttcttctgatcgaacaa
gaagcttgcttcagttttcgggaaggttgcctagctcttcaaacagccgccaaacaagta
tttgtggacggtgtctccggcaactgtcagattattctgcaaaccgaaattcccgttaag
tcattgttcgtcagtcggcaccacatcgctgtgtccaacggcaaacggctgtttttctat
gagatgctgccaagtagcaagtcagccaagttcttaggagccatgaacacggcatcttca
ctcattggactgcatgaagcgagcgtctacctcgtagagaacggcaagctcaacgccaag
acattccagggcattcttaagcaggcaattcctatctcggaagaagatgtgagtgcagtc
tgcctcgatatatcggggatttttctcgcccttggcttatccaacggccgtgttcgcgtc
tgggacttgagcaggcgagaggccaaactccacgcggaactgaagacagcgcttgttgcc
aagaggaacgatgggcccctctacaaaatctctagcatcaagtgcaactgcaccggcaat
aaagtgagcattctcgttgtagaggacatcgcgccacatcgcactgcacgacgcgaaggt
tgcactctttacgtctggagcatagaagacgactcactgttcgaattcagtttcgccact
ggcgaaagtagcaaaggacaagctgtcggcgactcgccatccagcggcacggtacgcgac
cgagctccgatttcgcattactgggacgaaagtgatcccagactacttgtttgtgaagct
cggagtgcaccgagcggtcgtacccaaatcgatgcgcccggaaatcgcgaaccacacgtg
gtggtggtgtccctttttgtaaccaccgaacacggcattttggagcaagatgtcttcccg
cttgatgacaaattcagactaatgggcgtacaggttccattcttttatcttttggccaag
cattctgatgacgtcagcgaaccaggggcggctgagaaagttcctggctcgaaacatatc
ttccggctcccaatgcgcgattttgtcgggtttcaagactgtgacgacacggtgcgcgac
gccatcatgacgttcagcttcttcatgacccttcgggacatggacgaggctttcaaggca
ataaaggccatcaaaaatgaggcagtctgggaaaacatggcgcgcatgtgcgtgagaacc
aagcggctcgatgtggccaagatatgcctcggcaaaatggctcatgcgcgtggggcttgg
tccctgagacgagccatggagactgagcccgagctggaagcacaaacggccatcctggcg
ctccagcttggcatggtgcaggaggctcaggatttactcgaaagctgcagccgctacgac
ttgctggtcagggttctagaagactctggtcagtgggagcgagccatagacgtcgcccga
cagcacgaccgaattcgtttgcgagccacataccataactacgcgaaacacctcgaggct
tctggtgacatcgagaaagcggtagcggcgtacgagaaagctgacacgcatctgttcgat
gtgcctcgcatgctcttcgacgacccgcaggcgctggagcaatacgttcgggccagcgga
agccccgacatgatcaagtggtgggcccagtacatggagagcataggggagatggaggcg
gcgttgcagttctacgaggccgcgcgggactacctgtcacttctgcgcgtgcactgttac
ttcggcaacgtggacaaggcgtgcgagattgccaacgagacggaagacagggcggcgtgc
tttcacctggcgaggtacctggagaaccaggacaatgtgctgcaggcggttcacttcttc
gcgagagcgcgcgcgtttggcaacgcgattagggtctgcaaggagaacgagatggacgac
cagctgtacacgctggctctgcaagcggcgcctaaagaagcgcttgaggcggcccgctac
ttcgagcagcgccaggatggtctcgagaaagcggtcaccctctaccagcgcggaggatgg
gcttccaaggcagccgaactggctctccaggccggggacctgggcgccctgcagcaggcc
gcccaggagctgggacctaacgccgaccctgtcctcgtgcgcaccacggccgaccgactg
gcggcgaccggaaagcacgatcaagctgtgctgctgctcgccaccagcggacagagcgac
gctgcgcttcagctgtgtatccagtccaacgtgctcatcaccgaagaactcgcagacagg
cttactgagggaatcgccacagacgacaaggctaagctccgcggagtactcgagaaaatc
gctgagtgctgcctcaagcaggacaactaccacctggcagccaagaaattcacccaggcc
ggcgataaagtccaggctatgagagcgctcctcaaatccggcgacacacgcaagatagtg
ttcttcgccaacgtgtccaggcagagagacatctacatcttggccgcaaactacctccag
accctcgactggcaacgagacgctgacgctgcaaagaacatcgtctccttctacaccaag
gccagggcgttcgacctgctggccagcttctacgaggcctgcgcgcgagccgaaatcgaa
gatcgccgagactacgagaaggccctggcggccctcaacgaagcacacgagtgtctgcag
ctgtgcggcgatgcgtccaaggcggccgcgagggtcagagaccacatggacgccgttcga
aagtttctcgccatccaggagctgtacgcggacagtccgctcgaagcggcggctcagtgc
gaagccatgaccaagctcaatctggagccggccgtgcgaaagggagacttgtttgcgttc
ctcgtgcagcactacgtgagtgaaaaggactatgccgcggcgagacgttgcttgcaggag
ctccagacggccgtgcctggagtcgcggtgtccgactacgtggacgctgaagtgttgagg
cttgtcggttggagctcggatgagcgccgcagtcttcagcagatgtcgctgctcgcgagg
cgcgccgccgctagcaatggcgccgccacggagggggatgaagatcgctacagctcggac
ggtgaggtacaggaggaactgttcgacgcaccttga
DBGET
integrated database retrieval system
